KCC000964A_c02
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC000964A_C02 KCC000964A_c02
ctcaagttcgcatagttGCCTGTGATTAGTAGGGAGCCTCACTTGACCTTACAAAGCCCA
CGGACACAACCCGTGTGGCCAACTCGCGCCAAATTACAATCATGGCCGTCGCGCTTCCTG
CGGCCGTCACCAGCGCCTACGAGCGCCTGGCTGGCGAGTTTGACAAGCTCAGCACCACCC
AGAAGTATGCCGTCGGCATCGCGGGTGGTGTCACCTCTCTATACCTGCTCGCCAAGGTGC
TGAAGGGCAGCGATCGCGACAAGCCGACCACCCTGCAGCTCAGCGGCGGTTCTATTGACT
CTTCCAAGGTCAAGGATGAGTTCACCGCTTACGCGGACAGCTATGGCAAGAACGCGGGCG
AGGGCATCACTGACCGCTCGAAGACCGTTCACCTGGTGGACGTGTTCTACAGCCTAGTCA
CTGACATTTACGAGTGGGGCTGGGGCCAGTCGTTCCACTTCTCTCCCAAGCTGCCCAACA
AGGACCTGAAGGCCTCCGAGGCCGCGCACGAGGCGCGCATCGCTGCCCTGCTGCGCCTGC
AGCCCGGCCAGAAGGCGCTGGACTGCGGCTGCGGTGTGGGTGGCCCGATGCGTACCGTCG
CTGCTGTCAGCGGCGCGCACATCACCGGCATCACCATCAACCAGTACCAGGTGGAGCCGC
GCCAAGACGCACAACGCACGGCAAGGTCTGGCTCCGCTGACGGACGTTGTCCGCGGCGAC
TTCACTAACATGCCGTTCAAGGAGAACACCTTCGACGGCGCCTACGCTATTGAGGCGACC
TGCCACGCCCCCAAGCTGGAGCAGGTGTACGGCGAGATCTACCGCGTGCTCAAGCCCGGC
AGCTACTTCGTGTCGTACGAGTGGGTGTCGACCCAGAAGTTTGACGTCAACAACGCCGAG
CACGTCAAGATTATGGACGAGATTAACTTCGGCAACGGCCTGCCGGAGATGCGCACCTGG
AAGGAGGCTGAGGACGCCGGCAAGAACGTGGGCTTCGAGCTGGTCATGTCGCTGGACCTG
GCCACCGCCTCCGTCGTCGCCGGCCCCTGGTACGAGCGCCTGCGTATGGGCAAGTACACG
CACGCCATCAACCACGGCATTGTGTCCACCGTCGACGCCCTGGGCCTGGCTCCCAAGGGC
CTCAAGGAGGTTCACCACATGCTCGTGGAGGTTGCCAAGTCGCTCATCCAGGGCGGCGAG
TCCGGCATCTTCACCCCCATGCACCTGCTGCTGTTCCGCAAGCCCGGTGCCGACAAGAAG
AAGTAAATG


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC000964A_C02 KCC000964A_c02
         (1269 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

emb|CAA61966.1| sterol-C-methyltransferase [Arabidopsis thaliana...   219  1e-91
ref|NP_173458.1| sterol-C-methyltransferase [Arabidopsis thalian...   219  2e-91
ref|NP_177736.1| S-adenosyl-methionine-sterol-C-methyltransferas...   212  3e-91
gb|AAM91592.1| 24-sterol C-methyltransferase [Arabidopsis thalia...   218  4e-91
gb|AAN31890.1| putative sterol-C-methyltransferase [Arabidopsis ...   216  1e-90

>emb|CAA61966.1| sterol-C-methyltransferase [Arabidopsis thaliana]
            gi|1587694|prf||2207220A sterol C-methyltransferase
          Length = 361

 Score =  219 bits (559), Expect(2) = 1e-91
 Identities = 105/197 (53%), Positives = 142/197 (71%)
 Frame = +1

Query: 655  SRAKTHNARQGLAPLTDVVRGDFTNMPFKENTFDGAYAIEATCHAPKLEQVYGEIYRVLK 834
            +RA+ HN + GL  L +VV G+F  MPF +N+FDGAY+IEATCHAPKLE+VY EIYRVLK
Sbjct: 160  NRARLHNKKAGLDALCEVVCGNFLQMPFDDNSFDGAYSIEATCHAPKLEEVYAEIYRVLK 219

Query: 835  PGSYFVSYEWVSTQKFDVNNAEHVKIMDEINFGNGLPEMRTWKEAEDAGKNVGFELVMSL 1014
            PGS +VSYEWV+T+KF   + EHV+++  I  G+ LP +R + +  +  K VGFE+V   
Sbjct: 220  PGSMYVSYEWVTTEKFKAEDDEHVEVIQGIERGDALPGLRAYVDIAETAKKVGFEIVKEK 279

Query: 1015 DLATASVVAGPWYERLRMGKYTHAINHGIVSTVDALGLAPKGLKEVHHMLVEVAKSLIQG 1194
            DL  AS  A PW+ RL+MG+  +  NH +V  + A+G+APKG  +VH ML + A  L +G
Sbjct: 280  DL--ASPPAEPWWTRLKMGRLAYWRNHIVVQILSAVGVAPKGTVDVHEMLFKTADCLTRG 337

Query: 1195 GESGIFTPMHLLLFRKP 1245
            GE+GIF+PMH++L RKP
Sbjct: 338  GETGIFSPMHMILCRKP 354

 Score =  140 bits (354), Expect(2) = 1e-91
 Identities = 70/145 (48%), Positives = 92/145 (63%)
 Frame = +3

Query: 219 LYLLAKVLKGSDRDKPTTLQLSGGSIDSSKVKDEFTAYADSYGKNAGEGITDRSKTVHLV 398
           +Y    VL  ++R     + LSGGSI + KV+D +  Y   + +   + I    K    V
Sbjct: 17  IYWFLCVLGPAERKGKRAVDLSGGSISAEKVQDNYKQYWSFFRRP--KEIETAEKVPDFV 74

Query: 399 DVFYSLVTDIYEWGWGQSFHFSPKLPNKDLKASEAAHEARIAALLRLQPGQKALDCGCGV 578
           D FY+LVTDIYEWGWGQSFHFSP +P K  K +   HE     L++++PGQK LD GCGV
Sbjct: 75  DTFYNLVTDIYEWGWGQSFHFSPSIPGKSHKDATRLHEEMAVDLIQVKPGQKILDVGCGV 134

Query: 579 GGPMRTVAAVSGAHITGITINQYQV 653
           GGPMR +A+ S A++ GITIN+YQV
Sbjct: 135 GGPMRAIASHSRANVVGITINEYQV 159

>ref|NP_173458.1| sterol-C-methyltransferase [Arabidopsis thaliana]
            gi|2129517|pir||S63686 sterol 24-C-methyltransferase (EC
            2.1.1.41) - Arabidopsis thaliana
            gi|9558593|gb|AAF88156.1|AC026234_7 Identical to
            24-sterol C-methyltransferase from Arabidopsis thaliana
            gi|2129517 and is a member of the ubiE/COQ5
            methyltransferase family PF|01209.  ESTs gb|T42228,
            gb|T46520, gb|T41746, gb|N38458, gb|AI993515,
            gb|AA389843, gb|AI099890, gb|AI099653 come from this gene
            gi|12083242|gb|AAG48780.1|AF332417_1 putative
            sterol-C-methyltransferase [Arabidopsis thaliana]
            gi|15028255|gb|AAK76716.1| putative
            sterol-C-methyltransferase [Arabidopsis thaliana]
            gi|21281107|gb|AAM45009.1| putative
            sterol-C-methyltransferase [Arabidopsis thaliana]
          Length = 361

 Score =  219 bits (558), Expect(2) = 2e-91
 Identities = 105/197 (53%), Positives = 142/197 (71%)
 Frame = +1

Query: 655  SRAKTHNARQGLAPLTDVVRGDFTNMPFKENTFDGAYAIEATCHAPKLEQVYGEIYRVLK 834
            +RA+ HN + GL  L +VV G+F  MPF +N+FDGAY+IEATCHAPKLE+VY EIYRVLK
Sbjct: 160  NRARLHNKKAGLDALCEVVCGNFLQMPFDDNSFDGAYSIEATCHAPKLEEVYAEIYRVLK 219

Query: 835  PGSYFVSYEWVSTQKFDVNNAEHVKIMDEINFGNGLPEMRTWKEAEDAGKNVGFELVMSL 1014
            PGS +VSYEWV+T+KF   + EHV+++  I  G+ LP +R + +  +  K VGFE+V   
Sbjct: 220  PGSMYVSYEWVTTEKFKAEDDEHVEVIQGIERGDALPGLRAYVDIAETAKKVGFEIVKEK 279

Query: 1015 DLATASVVAGPWYERLRMGKYTHAINHGIVSTVDALGLAPKGLKEVHHMLVEVAKSLIQG 1194
            DL  AS  A PW+ RL+MG+  +  NH +V  + A+G+APKG  +VH ML + A  L +G
Sbjct: 280  DL--ASPPAEPWWTRLKMGRLAYWRNHIVVQILSAVGVAPKGTVDVHEMLFKTADYLTRG 337

Query: 1195 GESGIFTPMHLLLFRKP 1245
            GE+GIF+PMH++L RKP
Sbjct: 338  GETGIFSPMHMILCRKP 354

 Score =  140 bits (354), Expect(2) = 2e-91
 Identities = 70/145 (48%), Positives = 92/145 (63%)
 Frame = +3

Query: 219 LYLLAKVLKGSDRDKPTTLQLSGGSIDSSKVKDEFTAYADSYGKNAGEGITDRSKTVHLV 398
           +Y    VL  ++R     + LSGGSI + KV+D +  Y   + +   + I    K    V
Sbjct: 17  IYWFLCVLGPAERKGKRAVDLSGGSISAEKVQDNYKQYWSFFRRP--KEIETAEKVPDFV 74

Query: 399 DVFYSLVTDIYEWGWGQSFHFSPKLPNKDLKASEAAHEARIAALLRLQPGQKALDCGCGV 578
           D FY+LVTDIYEWGWGQSFHFSP +P K  K +   HE     L++++PGQK LD GCGV
Sbjct: 75  DTFYNLVTDIYEWGWGQSFHFSPSIPGKSHKDATRLHEEMAVDLIQVKPGQKILDVGCGV 134

Query: 579 GGPMRTVAAVSGAHITGITINQYQV 653
           GGPMR +A+ S A++ GITIN+YQV
Sbjct: 135 GGPMRAIASHSRANVVGITINEYQV 159

>ref|NP_177736.1| S-adenosyl-methionine-sterol-C-methyltransferase -related
            [Arabidopsis thaliana]
            gi|14030613|gb|AAK52981.1|AF375397_1 At1g76090/T23E18_40
            [Arabidopsis thaliana] gi|21360447|gb|AAM47339.1|
            At1g76090/T23E18_40 [Arabidopsis thaliana]
          Length = 359

 Score =  212 bits (540), Expect(2) = 3e-91
 Identities = 103/196 (52%), Positives = 139/196 (70%)
 Frame = +1

Query: 658  RAKTHNARQGLAPLTDVVRGDFTNMPFKENTFDGAYAIEATCHAPKLEQVYGEIYRVLKP 837
            RAK HN + GL  L +VV G+F  MPF ENTFDGAY+IEATCHAPKLE+VY EI+RV+KP
Sbjct: 161  RAKLHNKKAGLDSLCNVVCGNFLKMPFDENTFDGAYSIEATCHAPKLEEVYSEIFRVMKP 220

Query: 838  GSYFVSYEWVSTQKFDVNNAEHVKIMDEINFGNGLPEMRTWKEAEDAGKNVGFELVMSLD 1017
            GS FVSYEWV+T+K+  ++ EH  ++  I  G+ LP +R++ +     K VGFE+V   D
Sbjct: 221  GSLFVSYEWVTTEKYRDDDEEHKDVIQGIERGDALPGLRSYADIAVTAKKVGFEVVKEKD 280

Query: 1018 LATASVVAGPWYERLRMGKYTHAINHGIVSTVDALGLAPKGLKEVHHMLVEVAKSLIQGG 1197
            LA     + PW+ RL+MG+  +  NH +V  + A+G+APKG  +VH ML + A  L +GG
Sbjct: 281  LAKPP--SKPWWNRLKMGRIAYWRNHVVVVILSAIGVAPKGTVDVHKMLFKTADYLTRGG 338

Query: 1198 ESGIFTPMHLLLFRKP 1245
            E+GIF+PMH++L RKP
Sbjct: 339  ETGIFSPMHMILCRKP 354

 Score =  147 bits (370), Expect(2) = 3e-91
 Identities = 78/153 (50%), Positives = 95/153 (61%)
 Frame = +3

Query: 198 IAGGVTSLYLLAKVLKGSDRDKPTTLQLSGGSIDSSKVKDEFTAYADSYGKNAGEGITDR 377
           IAG V   Y    VL  ++R       LSGGSI + KVKD +  Y   + K   + I   
Sbjct: 13  IAGAV---YWFICVLGPAERKGKRASDLSGGSISAEKVKDNYNQYWSFFRKP--KEIESA 67

Query: 378 SKTVHLVDVFYSLVTDIYEWGWGQSFHFSPKLPNKDLKASEAAHEARIAALLRLQPGQKA 557
            K    VD FY+LVTDIYEWGWGQSFHFSP +P K  K +   HE     L++++PGQK 
Sbjct: 68  EKVPDFVDTFYNLVTDIYEWGWGQSFHFSPHVPGKSDKDATRIHEEMAVDLIKVKPGQKI 127

Query: 558 LDCGCGVGGPMRTVAAVSGAHITGITINQYQVE 656
           LD GCGVGGPMR +AA S A +TGITIN+YQV+
Sbjct: 128 LDAGCGVGGPMRAIAAHSKAQVTGITINEYQVQ 160

>gb|AAM91592.1| 24-sterol C-methyltransferase [Arabidopsis thaliana]
            gi|25083682|gb|AAN72104.1| 24-sterol C-methyltransferase
            [Arabidopsis thaliana]
          Length = 361

 Score =  218 bits (555), Expect(2) = 4e-91
 Identities = 104/197 (52%), Positives = 142/197 (71%)
 Frame = +1

Query: 655  SRAKTHNARQGLAPLTDVVRGDFTNMPFKENTFDGAYAIEATCHAPKLEQVYGEIYRVLK 834
            +RA+ HN + GL  L +VV G+F  MPF +N+FDGAY+IEATCHAPKLE+VY EIYRVLK
Sbjct: 160  NRARLHNKKAGLDALCEVVCGNFLQMPFDDNSFDGAYSIEATCHAPKLEEVYAEIYRVLK 219

Query: 835  PGSYFVSYEWVSTQKFDVNNAEHVKIMDEINFGNGLPEMRTWKEAEDAGKNVGFELVMSL 1014
            PGS +VSYEWV+T+KF   + EHV+++  I  G+ LP +R + +  +  K VGFE+V   
Sbjct: 220  PGSMYVSYEWVTTEKFKAEDDEHVEVIQGIERGDALPGLRAYVDIAETAKKVGFEIVKEK 279

Query: 1015 DLATASVVAGPWYERLRMGKYTHAINHGIVSTVDALGLAPKGLKEVHHMLVEVAKSLIQG 1194
            DL  AS  A PW+ RL+MG+  +  NH +V  + A+G+APKG  +VH ML + A  L +G
Sbjct: 280  DL--ASPPAEPWWTRLKMGRLAYWRNHIVVQILSAVGVAPKGTVDVHEMLFKTADYLTRG 337

Query: 1195 GESGIFTPMHLLLFRKP 1245
            G++GIF+PMH++L RKP
Sbjct: 338  GQTGIFSPMHMILCRKP 354

 Score =  140 bits (354), Expect(2) = 4e-91
 Identities = 70/145 (48%), Positives = 92/145 (63%)
 Frame = +3

Query: 219 LYLLAKVLKGSDRDKPTTLQLSGGSIDSSKVKDEFTAYADSYGKNAGEGITDRSKTVHLV 398
           +Y    VL  ++R     + LSGGSI + KV+D +  Y   + +   + I    K    V
Sbjct: 17  IYWFLCVLGPAERKGKRAVDLSGGSISAEKVQDNYKQYWSFFRRP--KEIETAEKVPDFV 74

Query: 399 DVFYSLVTDIYEWGWGQSFHFSPKLPNKDLKASEAAHEARIAALLRLQPGQKALDCGCGV 578
           D FY+LVTDIYEWGWGQSFHFSP +P K  K +   HE     L++++PGQK LD GCGV
Sbjct: 75  DTFYNLVTDIYEWGWGQSFHFSPSIPGKSHKDATRLHEEMAVDLIQVKPGQKILDVGCGV 134

Query: 579 GGPMRTVAAVSGAHITGITINQYQV 653
           GGPMR +A+ S A++ GITIN+YQV
Sbjct: 135 GGPMRAIASHSRANVVGITINEYQV 159

>gb|AAN31890.1| putative sterol-C-methyltransferase [Arabidopsis thaliana]
          Length = 361

 Score =  216 bits (551), Expect(2) = 1e-90
 Identities = 104/196 (53%), Positives = 141/196 (71%)
 Frame = +1

Query: 655  SRAKTHNARQGLAPLTDVVRGDFTNMPFKENTFDGAYAIEATCHAPKLEQVYGEIYRVLK 834
            +RA+ HN + GL  L +VV G+F  MPF +N+FDGAY+IEATCHAPKLE+VY EIYRVLK
Sbjct: 160  NRARLHNKKAGLDALCEVVCGNFLQMPFDDNSFDGAYSIEATCHAPKLEEVYAEIYRVLK 219

Query: 835  PGSYFVSYEWVSTQKFDVNNAEHVKIMDEINFGNGLPEMRTWKEAEDAGKNVGFELVMSL 1014
            PGS +VSYEWV+T+KF   + EHV+++  I  G+ LP +R + +  +  K VGFE+V   
Sbjct: 220  PGSMYVSYEWVTTEKFKAEDDEHVEVIQGIERGDALPGLRAYVDIAETAKKVGFEIVKEK 279

Query: 1015 DLATASVVAGPWYERLRMGKYTHAINHGIVSTVDALGLAPKGLKEVHHMLVEVAKSLIQG 1194
            DL  AS  A PW+ RL+MG+  +  NH +V  + A+G+APKG  +VH ML + A  L +G
Sbjct: 280  DL--ASPPAEPWWTRLKMGRLAYWRNHIVVQILSAVGVAPKGTVDVHEMLFKTADYLTRG 337

Query: 1195 GESGIFTPMHLLLFRK 1242
            GE+GIF+PMH++L RK
Sbjct: 338  GETGIFSPMHMILCRK 353

 Score =  140 bits (354), Expect(2) = 1e-90
 Identities = 70/145 (48%), Positives = 92/145 (63%)
 Frame = +3

Query: 219 LYLLAKVLKGSDRDKPTTLQLSGGSIDSSKVKDEFTAYADSYGKNAGEGITDRSKTVHLV 398
           +Y    VL  ++R     + LSGGSI + KV+D +  Y   + +   + I    K    V
Sbjct: 17  IYWFLCVLGPAERKGKRAVDLSGGSISAEKVQDNYKQYWSFFRRP--KEIETAEKVPDFV 74

Query: 399 DVFYSLVTDIYEWGWGQSFHFSPKLPNKDLKASEAAHEARIAALLRLQPGQKALDCGCGV 578
           D FY+LVTDIYEWGWGQSFHFSP +P K  K +   HE     L++++PGQK LD GCGV
Sbjct: 75  DTFYNLVTDIYEWGWGQSFHFSPSIPGKSHKDATRLHEEMAVDLIQVKPGQKILDVGCGV 134

Query: 579 GGPMRTVAAVSGAHITGITINQYQV 653
           GGPMR +A+ S A++ GITIN+YQV
Sbjct: 135 GGPMRAIASHSRANVVGITINEYQV 159



EST assemble image


clone accession position
1 LCL058a01_r AV629396 1 370
2 MXL047h10_r BP095822 18 455
3 LCL053g06_r AV629180 23 485
4 LCL005f08_r AV626276 23 493
5 MXL009e03_r BP093514 24 487
6 CM039e07_r AV388924 25 581
7 LCL038d04_r AV628204 25 356
8 LC074c02_r AV624194 26 530
9 LC014c01_r AV619863 26 531
10 LC054a06_r AV622751 27 557
11 LCL059g04_r AV629493 28 448
12 HC086c09_r AV638432 29 515
13 LC097e04_r AV625760 30 485
14 MX255h05_r BP092554 32 345
15 LC059c12_r AV623132 33 535
16 LC011c06_r AV619649 33 560
17 MX259f05_r BP092822 34 506
18 LCL046a01_r AV628706 34 495
19 LC029b11_r AV620956 37 571
20 HC009g09_r AV632570 37 516
21 MXL026c02_r BP094640 37 350
22 CM007a12_r AV386772 38 584
23 LCL011a08_r AV626549 42 203
24 MXL008g08_r BP093466 92 496
25 HC069a08_r AV637124 114 562
26 LC100a08_r AV625937 125 468
27 LC062d09_r AV623347 233 739
28 LC081e06_r AV624709 451 948
29 MX052h10_r BP088155 462 792
30 MX039d03_r BP087620 553 1029
31 HC085h11_r AV638404 629 1046
32 HC017h09_r AV633198 648 1082
33 CM079b09_r AV391977 757 936
34 LC070c01_r AV623901 782 1281




Chlamydomonas reinhardtii
Kazusa DNA Research Institute