KCC000955A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC000955A_C01 KCC000955A_c01
ccgcgcctgtgggcattcagtgggccaactgcagctcgcccaACCAGCCCGCGGTGCTGT
CCACCAACTACGTGTCCTTCTCTTCCGCTCTGGCCACCAAGTTCTTCTACAGCCCCAACC
CTAACACCGTGGCCTCCCTGCCTCGCGGCTTCCGCTGCGACGCCTGGGCCGCCAACGGCT
CCATCACCCGGCCGGCGCCCAACAACCCGCCCTTCGGCACGCCGCCCAACCTCACCTGGA
TGTACCCGCGCGACTGCCCCGCCGGACTCAAAGTCGGCAGCGAGTGCCGCATGGGCACGA
TCATGCGGGATTTGTTCCCTAGCATTACCTGGAACTTCTGGAATGTCCGCTGCTGGACCT
ACTGGTCGGGCAGCATTAAGAACGGCGTGTCGCGCGCCTTCAACCTGCCCGGCGTGCACT
ACCAGACCCTGGCGGGCGCGCGCACCTACGAGATGTTCGGTGACGGCCTCAACTTCTACA
ACTACGCACCCATCCGCACCCGCTTCGCGTCCAACGTCTATCAGCTCTTTGTGCTGGACT
GGGTGGCGCTTGGGCCGCTGTGGAACCGCGTTGCGGCGCAGATTGTGTGGGACGGTACCG
ATAACGGAAATTCTACAGACGTTGATAATTTCCTCAAGACCGACAGCAGCCGCATGATCC
TGCCGGCG


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC000955A_C01 KCC000955A_c01
         (668 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_823399.1| putative protoporphyrinogen oxidase [Streptomyc...    72  1e-11
dbj|BAC58076.2| large tegument protein [Cercopithecine herpesvir...    69  5e-11
gb|AAA59163.1| mucin                                                   68  1e-10
gb|AAA59875.1| mucin                                                   68  1e-10
pir||A43932 mucin 2 precursor, intestinal - human (fragments)          68  1e-10

>ref|NP_823399.1| putative protoporphyrinogen oxidase [Streptomyces avermitilis
           MA-4680] gi|29605870|dbj|BAC69934.1| putative
           protoporphyrinogen oxidase [Streptomyces avermitilis
           MA-4680]
          Length = 474

 Score = 71.6 bits (174), Expect = 1e-11
 Identities = 67/194 (34%), Positives = 80/194 (40%), Gaps = 17/194 (8%)
 Frame = +1

Query: 16  FSGPTAARPTSPRCCPPTTCPSLPLWPPSS------STAPTLTPWPPCLAASAATPGPPT 177
           +S P   RP  P CC P   P  P WP SS      S +PT    P    A+A++  P T
Sbjct: 280 WSSPCPPRPP-PSCCAPRHPPPRPSWPASSTRPWRWSPSPTAAVGPASPKAAASSCLPST 338

Query: 178 -APSPGRRPTTRPSA----RRPTSPGCTRATAPP----DSKSAASAAWARSCGICSLALP 330
            APS  RR   R  A    R PT   C R +        S     A+W      C+    
Sbjct: 339 GAPSRHRRSPPRSGAGSRTRTPTCWCCARRSGGTARRRSSAGTTPASWTSRATTCARRPA 398

Query: 331 GTSGMS-AAGPTGRAALRTACRAPSTCPACTTRPWRARAPTRCSVTASTSTTTHPSAPAS 507
                S AA P G     TACR+    P+ TTR W A A T  S  AS S     +A AS
Sbjct: 399 WPPRRSPAASPAGP----TACRST---PSATTRAWPASATTSPSCPASPSAARRTTASAS 451

Query: 508 RPTS-ISSLCWTGW 546
           RP S   +  W+ W
Sbjct: 452 RPASPARTPPWSSW 465

 Score = 41.6 bits (96), Expect = 0.011
 Identities = 31/93 (33%), Positives = 38/93 (40%)
 Frame = +1

Query: 10  WAFSGPTAARPTSPRCCPPTTCPSLPLWPPSSSTAPTLTPWPPCLAASAATPGPPTAPSP 189
           W      AA P  P  C  T   +   WP S++T+P+                 P +PS 
Sbjct: 399 WPPRRSPAASPAGPTACRSTPSATTRAWPASATTSPSC----------------PASPSA 442

Query: 190 GRRPTTRPSARRPTSPGCTRATAPPDSKSAASA 288
            RR T   SA RP SP    A  PP S  AA+A
Sbjct: 443 ARRTTA--SASRPASP----ARTPPWSSWAATA 469

 Score = 35.0 bits (79), Expect = 1.0
 Identities = 46/174 (26%), Positives = 59/174 (33%), Gaps = 3/174 (1%)
 Frame = +1

Query: 130 WPPCLAASAATPGPPTAPSPGRRPTTRPSARRPTSPGCTRATAPPDSKS---AASAAWAR 300
           W P  A    TP P ++P P R P           P C     PP   S   +++  W  
Sbjct: 268 WSP--AVVCCTPTPWSSPCPPRPP-----------PSCCAPRHPPPRPSWPASSTRPWRW 314

Query: 301 SCGICSLALPGTSGMSAAGPTGRAALRTACRAPSTCPACTTRPWRARAPTRCSVTASTST 480
           S           S  +A GP    A  ++C  PST      R    R+P R    + T T
Sbjct: 315 S----------PSPTAAVGPASPKAAASSC-LPSTGAPSRHR----RSPPRSGAGSRTRT 359

Query: 481 TTHPSAPASRPTSISSLCWTGWRLGRCGTALRRRLCGTVPITEILQTLIISSRP 642
            T               CW   R    GTA RR   GT P +   +    + RP
Sbjct: 360 PT---------------CWCCARRSG-GTARRRSSAGTTPASWTSRATTCARRP 397

>dbj|BAC58076.2| large tegument protein [Cercopithecine herpesvirus 1]
          Length = 3326

 Score = 69.3 bits (168), Expect = 5e-11
 Identities = 54/171 (31%), Positives = 70/171 (40%), Gaps = 9/171 (5%)
 Frame = +1

Query: 22   GPTAARPTSPRCCP-PTTCPSLPLWPPSSSTAPT-----LTPWPPCLAAS-AATPGPPTA 180
            GP    PTSP   P  TT  + P  PP ++T PT      TP P   AA  A+ P  P A
Sbjct: 2799 GPETPTPTSPTANPHATTASATPAPPPVAATGPTRPTSPATPTPTVAAAGRASAPPAPAA 2858

Query: 181  PSPGRRPTTRPSARRPTSPGCTRATAPPDSKS--AASAAWARSCGICSLALPGTSGMSAA 354
            P+    P    +   P +P    A A P + +  AA AA A      + A P      AA
Sbjct: 2859 PAAPAAPAAPAAPAAPAAPAAPAAPAAPAAPAAPAAPAAPAAPAAPAAPAAPAAPAAPAA 2918

Query: 355  GPTGRAALRTACRAPSTCPACTTRPWRARAPTRCSVTASTSTTTHPSAPAS 507
                 A    A  AP+  PA    P    AP   +  A+ +    P+APA+
Sbjct: 2919 PAAPAAPAAPAAPAPAAVPAAPAAPAAPAAPAAPAAPAAPAAPAAPAAPAA 2969

 Score = 62.8 bits (151), Expect = 5e-09
 Identities = 55/180 (30%), Positives = 68/180 (37%), Gaps = 9/180 (5%)
 Frame = +1

Query: 13   AFSGPTAARPTSPRCCPPT-------TCPSLPLWP--PSSSTAPTLTPWPPCLAASAATP 165
            A +GPT  RPTSP    PT       + P  P  P  P++  AP   P  P   A+ A P
Sbjct: 2827 AATGPT--RPTSPATPTPTVAAAGRASAPPAPAAPAAPAAPAAPA-APAAPAAPAAPAAP 2883

Query: 166  GPPTAPSPGRRPTTRPSARRPTSPGCTRATAPPDSKSAASAAWARSCGICSLALPGTSGM 345
              P AP+    P    +   P +P    A A P +  AA AA A        A+P     
Sbjct: 2884 AAPAAPAAPAAPAAPAAPAAPAAPAAPAAPAAP-AAPAAPAAPAAPAAPAPAAVPAAPAA 2942

Query: 346  SAAGPTGRAALRTACRAPSTCPACTTRPWRARAPTRCSVTASTSTTTHPSAPASRPTSIS 525
             AA     A    A  A    PA    P  A  P       +T T T  ++PA   T  S
Sbjct: 2943 PAAPAAPAAPAAPAAPAAPAAPAAPAAPAPAAVPVVVPAPTATLTATTTTSPAPAATPAS 3002

 Score = 56.2 bits (134), Expect = 4e-07
 Identities = 43/138 (31%), Positives = 53/138 (38%), Gaps = 1/138 (0%)
 Frame = +1

Query: 94   PPSSST-APTLTPWPPCLAASAATPGPPTAPSPGRRPTTRPSARRPTSPGCTRATAPPDS 270
            PP   T  PT     P    ++ATP PP   + G    T P+   PT     RA+APP  
Sbjct: 2797 PPGPETPTPTSPTANPHATTASATPAPPPVAATGPTRPTSPATPTPTVAAAGRASAPP-- 2854

Query: 271  KSAASAAWARSCGICSLALPGTSGMSAAGPTGRAALRTACRAPSTCPACTTRPWRARAPT 450
              AA AA A      + A P      AA     A    A  A    PA    P    AP 
Sbjct: 2855 APAAPAAPAAPAAPAAPAAPAAPAAPAAPAAPAAPAAPAAPAAPAAPAAPAAPAAPAAPA 2914

Query: 451  RCSVTASTSTTTHPSAPA 504
              +  A+ +    P+APA
Sbjct: 2915 APAAPAAPAAPAAPAAPA 2932

 Score = 48.1 bits (113), Expect = 1e-04
 Identities = 47/164 (28%), Positives = 61/164 (36%), Gaps = 4/164 (2%)
 Frame = +1

Query: 34   ARPTSPRCCPPTTCPSLPLWP--PSSSTAPTL--TPWPPCLAASAATPGPPTAPSPGRRP 201
            A P +P    P   P+ P  P  P++  AP     P  P   A+ A P P   P     P
Sbjct: 2923 AAPAAPAAPAPAAVPAAPAAPAAPAAPAAPAAPAAPAAPAAPAAPAAPAPAAVPVVVPAP 2982

Query: 202  TTRPSARRPTSPGCTRATAPPDSKSAASAAWARSCGICSLALPGTSGMSAAGPTGRAALR 381
            T   +A   TSP      A P     +S     S           +G S A P G    R
Sbjct: 2983 TATLTATTTTSPAPAATPASPVPTPTSSLPTPPSKPPAFFQPSLATGGSVA-PGGDFRRR 3041

Query: 382  TACRAPSTCPACTTRPWRARAPTRCSVTASTSTTTHPSAPASRP 513
               R  +  PA  +RP  AR   R +V+ ST +   P    +RP
Sbjct: 3042 APSRPTAAVPAAPSRP-PARRLARPAVSRSTESFALPPDELARP 3084

 Score = 42.4 bits (98), Expect = 0.006
 Identities = 32/88 (36%), Positives = 38/88 (42%), Gaps = 8/88 (9%)
 Frame = +1

Query: 25  PTAARPTSPRCCPPTTCPSLPLWPPSSSTAPTLTPWPPCLAASAATPG--PPT----APS 186
           PT   P +P   P    P  P  PP+ +   T +  PP  A    TP   PPT     P+
Sbjct: 418 PTPGAPPTPGAPPTPGAPPTPGAPPTPAGPTTASSEPPTPAGRPPTPAGRPPTPAGRPPT 477

Query: 187 PGRRPTTRPSARRPTSPG--CTRATAPP 264
           P  RP T P+ R PT  G   T A  PP
Sbjct: 478 PAGRPPT-PAGRPPTPAGRPPTPAGRPP 504

 Score = 40.8 bits (94), Expect = 0.018
 Identities = 55/224 (24%), Positives = 66/224 (28%), Gaps = 63/224 (28%)
 Frame = +1

Query: 25   PTAARPTSP-RCCPPTTCPSLPLWPPSSSTA--------------PTLTPWPPCLAASAA 159
            P AARP +P R  PP      P  P   S A              P   P PP   ++  
Sbjct: 2635 PPAARPAAPDRSVPPPRPAPRPSEPAVQSRARRPDAPPQSARPRTPRDDPGPPAAPSTLP 2694

Query: 160  TPGPPTAPSPGRRPTTRPS-------------------------ARRPTSPGCTRATAP- 261
               PP AP P   P   PS                          R P  P   RA AP 
Sbjct: 2695 PSPPPPAPHPPDPPPPDPSPRPNELGGGETAAAPSAPDPPPPQTVRAPERPRDDRAPAPG 2754

Query: 262  ---------------PDS------KSAASAAWARSCGICSLALPGTSGMSAAGPTGRAAL 378
                           P S      + AA  A      +     PG    +   PT     
Sbjct: 2755 RVSLPRRASRQGRPAPSSPLQRPRRRAARPAVGSLTNLADPHPPGPETPTPTSPTANPHA 2814

Query: 379  RTACRAPSTCPACTTRPWRARAP-TRCSVTASTSTTTHPSAPAS 507
             TA   P+  P   T P R  +P T     A+    + P APA+
Sbjct: 2815 TTASATPAPPPVAATGPTRPTSPATPTPTVAAAGRASAPPAPAA 2858

 Score = 40.4 bits (93), Expect = 0.024
 Identities = 31/83 (37%), Positives = 37/83 (44%), Gaps = 7/83 (8%)
 Frame = +1

Query: 37  RPTSPRCCPPTT-CPSLPLWPPSSSTAPTLTPWPPCLAASAATPGPPT----APSPGRRP 201
           RP +P   PPT   P  P  PP+    PT    P     + A+  PPT     P+P  RP
Sbjct: 409 RPPTPASRPPTPGAPPTPGAPPTPGAPPTPGAPPTPAGPTTASSEPPTPAGRPPTPAGRP 468

Query: 202 TTRPSARRPTSPG--CTRATAPP 264
            T P+ R PT  G   T A  PP
Sbjct: 469 PT-PAGRPPTPAGRPPTPAGRPP 490

 Score = 40.4 bits (93), Expect = 0.024
 Identities = 34/94 (36%), Positives = 39/94 (41%), Gaps = 10/94 (10%)
 Frame = +1

Query: 25  PTAARPTSPRCCP----PTTCPSLPLWPPSSSTAPTLTPWPPCLAASAATPG--PPT--- 177
           PT   P +P   P    PTT  S P  P  +   PT    PP  A    TP   PPT   
Sbjct: 430 PTPGAPPTPGAPPTPAGPTTASSEP--PTPAGRPPTPAGRPPTPAGRPPTPAGRPPTPAG 487

Query: 178 -APSPGRRPTTRPSARRPTSPGCTRATAPPDSKS 276
             P+P  RP T P+ R PT  G     A P + S
Sbjct: 488 RPPTPAGRPPT-PAGRPPTPAGRPPTPANPTASS 520

 Score = 40.4 bits (93), Expect = 0.024
 Identities = 45/164 (27%), Positives = 61/164 (36%), Gaps = 2/164 (1%)
 Frame = +1

Query: 28   TAARPTSPRCCPPTTCPSLPLWPPSSSTAPTLTPWPPCLAASAATPGPPTAPSPG--RRP 201
            TA   TSP    P   P+ P+  P+SS  PT    PP     +   G   AP     RR 
Sbjct: 2987 TATTTTSPA---PAATPASPVPTPTSSL-PTPPSKPPAFFQPSLATGGSVAPGGDFRRRA 3042

Query: 202  TTRPSARRPTSPGCTRATAPPDSKSAASAAWARSCGICSLALPGTSGMSAAGPTGRAALR 381
             +RP+A  P +P      + P ++  A  A +RS    S ALP         P   A   
Sbjct: 3043 PSRPTAAVPAAP------SRPPARRLARPAVSRSTE--SFALPPDELARPRTPEAPAPPT 3094

Query: 382  TACRAPSTCPACTTRPWRARAPTRCSVTASTSTTTHPSAPASRP 513
                AP         P + R P+  +  A  +  + PS     P
Sbjct: 3095 ETEEAPVAERPAPPEPPQGRPPSPAAPDAGPAAASGPSGGVPAP 3138

 Score = 39.7 bits (91), Expect = 0.041
 Identities = 32/85 (37%), Positives = 38/85 (44%), Gaps = 5/85 (5%)
 Frame = +1

Query: 25  PTAARPTSPRCCPPTTC--PSLPLWPPSSSTA--PTLTPWPPCLAASAATP-GPPTAPSP 189
           PT A PT+    PPT    P  P   P +     PT    PP  A    TP G P  P+P
Sbjct: 442 PTPAGPTTASSEPPTPAGRPPTPAGRPPTPAGRPPTPAGRPPTPAGRPPTPAGRP--PTP 499

Query: 190 GRRPTTRPSARRPTSPGCTRATAPP 264
             RP T P+ R PT    T ++ PP
Sbjct: 500 AGRPPT-PAGRPPTPANPTASSEPP 523

 Score = 38.5 bits (88), Expect = 0.091
 Identities = 45/141 (31%), Positives = 56/141 (38%), Gaps = 4/141 (2%)
 Frame = +1

Query: 109 TAPTLTPWPPCLAASAATPGPPTAPSPGRRPTTRPSARRPTSPGCTRATAPPDSKSAASA 288
           T P   P PP  A+   TPG P  P+PG  PT  P A  P +PG     A P + S+   
Sbjct: 402 TRPAAGPRPPTPASRPPTPGAP--PTPGAPPT--PGA--PPTPGAPPTPAGPTTASSEPP 455

Query: 289 AWARSCGICSLALPGTSGM--SAAG--PTGRAALRTACRAPSTCPACTTRPWRARAPTRC 456
             A      +   P  +G   + AG  PT      T    P T PA        R PT  
Sbjct: 456 TPAGRPPTPAGRPPTPAGRPPTPAGRPPTPAGRPPTPAGRPPT-PAGRPPTPAGRPPTPA 514

Query: 457 SVTASTSTTTHPSAPASRPTS 519
           + TAS+   T     A  P+S
Sbjct: 515 NPTASSEPPTPNPEGAPAPSS 535

 Score = 38.1 bits (87), Expect = 0.12
 Identities = 46/172 (26%), Positives = 65/172 (37%), Gaps = 4/172 (2%)
 Frame = +1

Query: 34   ARPTSPRCCPPTTCPSLPLWPPSSSTAPTLTPWPPCLAASAATPGPPTAPSPGRRPTTRP 213
            +RPT+     P+  P+  L  P+ S +      PP      A P  P AP+P       P
Sbjct: 3044 SRPTAAVPAAPSRPPARRLARPAVSRSTESFALPP---DELARPRTPEAPAPPTETEEAP 3100

Query: 214  SARRPTSP----GCTRATAPPDSKSAASAAWARSCGICSLALPGTSGMSAAGPTGRAALR 381
             A RP  P    G   + A PD+  AA++    S G+ +  L        A P  +    
Sbjct: 3101 VAERPAPPEPPQGRPPSPAAPDAGPAAAS--GPSGGVPAPRLGALVPGRVAVPRRQI--- 3155

Query: 382  TACRAPSTCPACTTRPWRARAPTRCSVTASTSTTTHPSAPASRPTSISSLCW 537
                 P   PA +  P R+ AP   S  +S +    P A    P S+    W
Sbjct: 3156 PPPAPPREIPAPSPPPPRSHAPRVSSWASSLALHEEPDA---GPVSLKQTLW 3204

 Score = 36.2 bits (82), Expect = 0.45
 Identities = 31/115 (26%), Positives = 39/115 (32%), Gaps = 21/115 (18%)
 Frame = +1

Query: 31  AARPTSPRCCPPTTC--PSLPLWPPSSSTAPTLTPWPPCLAASAATPGPPTAPSPGRRPT 204
           A RP +P   PPT    P  P   P +      TP  P  ++   TP P  AP+P     
Sbjct: 479 AGRPPTPAGRPPTPAGRPPTPAGRPPTPAGRPPTPANPTASSEPPTPNPEGAPAPSSNEQ 538

Query: 205 TRPSA---------------RRPTSPGCTRAT----APPDSKSAASAAWARSCGI 312
              +A               R+P  P C   T      PD+    S   A   GI
Sbjct: 539 PPAAASTDEATQKALDALRDRQPPEPPCGSLTELLGRHPDTDGGVSRLAAHEAGI 593

 Score = 35.8 bits (81), Expect = 0.59
 Identities = 30/99 (30%), Positives = 39/99 (39%), Gaps = 8/99 (8%)
 Frame = +1

Query: 19  SGPTAA--RPTSPRCCPPTTC--PSLPLWPPSSSTA--PTLTPWPPCLAASAATPG--PP 174
           +GPT A   P +P   PPT    P  P   P +     PT    PP  A    TP   PP
Sbjct: 445 AGPTTASSEPPTPAGRPPTPAGRPPTPAGRPPTPAGRPPTPAGRPPTPAGRPPTPAGRPP 504

Query: 175 TAPSPGRRPTTRPSARRPTSPGCTRATAPPDSKSAASAA 291
           T       P    ++  P +P    A AP  ++   +AA
Sbjct: 505 TPAGRPPTPANPTASSEPPTPNPEGAPAPSSNEQPPAAA 543

 Score = 34.7 bits (78), Expect = 1.3
 Identities = 53/201 (26%), Positives = 61/201 (29%), Gaps = 38/201 (18%)
 Frame = +1

Query: 25   PTAARPTSPRCCPPT---TCPSLPLWPPSSSTAPTLTPW--------------PPCLAAS 153
            P    P  P   PP    T   LP  P   +  P +  W              PP     
Sbjct: 2577 PGGGAPPDPEAPPPPSHQTPAILPDEPVGETVHPRMLTWIRGLEELASDDAGDPPPPLPP 2636

Query: 154  AATPGPPTAPSPGRRPTTRPS-------ARRPTSPGCTRATAPPDSKSAASAAWARSCGI 312
            AA P  P    P  RP  RPS       ARRP +P  +     P       AA +     
Sbjct: 2637 AARPAAPDRSVPPPRPAPRPSEPAVQSRARRPDAPPQSARPRTPRDDPGPPAAPSTLPPS 2696

Query: 313  CSLALPGTSGMSAAGPT------GRAALRTACRAPSTCPACTT------RPWRARAPTRC 456
                 P         P+      G      A  AP   P  T       R  RA AP R 
Sbjct: 2697 PPPPAPHPPDPPPPDPSPRPNELGGGETAAAPSAPDPPPPQTVRAPERPRDDRAPAPGRV 2756

Query: 457  SV--TASTSTTTHPSAPASRP 513
            S+   AS      PS+P  RP
Sbjct: 2757 SLPRRASRQGRPAPSSPLQRP 2777

>gb|AAA59163.1| mucin
          Length = 1270

 Score = 67.8 bits (164), Expect = 1e-10
 Identities = 62/214 (28%), Positives = 83/214 (37%), Gaps = 32/214 (14%)
 Frame = +1

Query: 1    PRLWAFSGPTAARPTSPRCC----PPTTCPS----LPLWPPSSSTA--PTLTPWPPCLAA 150
            P +   + P    P+ P       PPTT PS     P+ PP+S+T   PT TP PP    
Sbjct: 964  PTITTTTPPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPSPP--PT 1021

Query: 151  SAATPGPPTAPSPG---------RRPTTRPSARRPTSPGCTRATAPPDSKSAASAAWARS 303
            +  TP P T PSP             TT P    P+SP  T  + P  + +  S     S
Sbjct: 1022 TTTTPPPTTTPSPPTTTTPSPPITTTTTPPPTTTPSSPITTTPSPPTTTMTTPSPTTTPS 1081

Query: 304  CGICSLALPGTSGMSAAGPTGRAALRTACRAPSTCPACTTRPWRARAPTRCSVTASTSTT 483
              I +   P ++   +  PT          +P+T P+  T       PT    T S+  T
Sbjct: 1082 SPITTTTTPSSTTTPSPPPT-----TMTTPSPTTTPSPPTTTMTTLPPT----TTSSPLT 1132

Query: 484  THPSAPASRPTSIS------------SLC-WTGW 546
            T P  P+  P + S             LC WTGW
Sbjct: 1133 TTPLPPSITPPTFSPFSTTTPTTPCVPLCNWTGW 1166

 Score = 67.0 bits (162), Expect = 2e-10
 Identities = 56/176 (31%), Positives = 74/176 (41%), Gaps = 8/176 (4%)
 Frame = +1

Query: 25   PTAARPTSPRCCPPTTCPS----LPLWPPSSSTA--PTLTPWPPCLAASAATPGPPTAPS 186
            P     T+P   PPTT PS     P+ PP+S+T   PT TP PP    +  TP P T PS
Sbjct: 861  PPTTTTTTP---PPTTTPSPPMTTPITPPASTTTLPPTTTPSPP--TTTTTTPPPTTTPS 915

Query: 187  PGRRPTTRPSARRPTSPGCTRATAPPDSKSAASAAWARSCGICSLALPGTSGMSAAGPTG 366
            P       P     T P  T  + PP + +        S    +   P T   +   PT 
Sbjct: 916  PPTTTPITPPTSTTTLPPTTTPSPPPTTTTTPPPTTTPSPPTTTTPSPPTITTTTPPPTT 975

Query: 367  RAALRTACRAPSTCPACTTRPWRARAPTRCSVTASTSTTTHP--SAPASRPTSISS 528
              +  T     +T P  TT P     PT   +T  TSTTT P  + P+  PT+ ++
Sbjct: 976  TPSPPT---TTTTTPPPTTTP---SPPTTTPITPPTSTTTLPPTTTPSPPPTTTTT 1025

 Score = 64.7 bits (156), Expect = 1e-09
 Identities = 56/172 (32%), Positives = 76/172 (43%), Gaps = 4/172 (2%)
 Frame = +1

Query: 25   PTAARPTSPRCCPPTTCPSLPLWPPSSSTAPTLTPWPPCLAASAATPGPPTAPSPGRRPT 204
            P     T+P   PPTT PS P+   +++  PT TP PP   ++  TP P T PSP   PT
Sbjct: 799  PPTTTTTTP---PPTTTPSPPI-TTTTTPLPTTTPSPP--ISTTTTPPPTTTPSP---PT 849

Query: 205  TRPS--ARRPTSPGCTRATAPPDSKSAASAAWARSCGICSLALPGTSGMSAAGPTGRAAL 378
            T PS     P+ P  T  T PP +  +       +    +  LP T+  S    T     
Sbjct: 850  TTPSPPTTTPSPPTTTTTTPPPTTTPSPPMTTPITPPASTTTLPPTTTPSPPTTT----- 904

Query: 379  RTACRAPSTCPACTTRPWRARAPTRCSVTASTSTTTHP--SAPASRPTSISS 528
                   +T P  TT P     PT   +T  TSTTT P  + P+  PT+ ++
Sbjct: 905  -------TTTPPPTTTP---SPPTTTPITPPTSTTTLPPTTTPSPPPTTTTT 946

 Score = 63.2 bits (152), Expect = 3e-09
 Identities = 57/182 (31%), Positives = 73/182 (39%), Gaps = 14/182 (7%)
 Frame = +1

Query: 19   SGPTAARPTSPRCC----PPTTCPSLPLWPPSSSTA---PTLTPWPPCLA-----ASAAT 162
            S PT   P+ P       PPTT PS    PP+++T    PT TP PP         S  T
Sbjct: 954  SPPTTTTPSPPTITTTTPPPTTTPS----PPTTTTTTPPPTTTPSPPTTTPITPPTSTTT 1009

Query: 163  PGPPTAPSPGRRPTTRPSARRPTSPGCTRATAPP-DSKSAASAAWARSCGICSLALPGTS 339
              P T PSP    TT P      SP  T   +PP  + +        S  I +   P T+
Sbjct: 1010 LPPTTTPSPPPTTTTTPPPTTTPSPPTTTTPSPPITTTTTPPPTTTPSSPITTTPSPPTT 1069

Query: 340  GMSAAGPTGRAALRTACRAPSTCPACTTRPWRARAPTRCSVTAST-STTTHPSAPASRPT 516
             M+   PT           PS+    TT P     P+    T +T S TT PS P +  T
Sbjct: 1070 TMTTPSPT---------TTPSSPITTTTTPSSTTTPSPPPTTMTTPSPTTTPSPPTTTMT 1120

Query: 517  SI 522
            ++
Sbjct: 1121 TL 1122

 Score = 61.6 bits (148), Expect = 1e-08
 Identities = 56/171 (32%), Positives = 70/171 (40%), Gaps = 6/171 (3%)
 Frame = +1

Query: 25   PTAARPTSPRCCPPTTCPS----LPLWPPSSSTA--PTLTPWPPCLAASAATPGPPTAPS 186
            P     T+P   PPTT PS     P+ PP+S+T   PT TP PP    +  TP P T PS
Sbjct: 900  PPTTTTTTP---PPTTTPSPPTTTPITPPTSTTTLPPTTTPSPP--PTTTTTPPPTTTPS 954

Query: 187  PGRRPTTRPSARRPTSPGCTRATAPPDSKSAASAAWARSCGICSLALPGTSGMSAAGPTG 366
            P       P+   P+ P  T  T PP +  +       +    +   P T+      PT 
Sbjct: 955  P-------PTTTTPSPPTITTTTPPPTTTPSPPTTTTTTPPPTTTPSPPTT-TPITPPTS 1006

Query: 367  RAALRTACRAPSTCPACTTRPWRARAPTRCSVTASTSTTTHPSAPASRPTS 519
               L      PS  P  TT P     PT    T S  TTT PS P +  T+
Sbjct: 1007 TTTL-PPTTTPSPPPTTTTTP----PPT---TTPSPPTTTTPSPPITTTTT 1049

 Score = 61.6 bits (148), Expect = 1e-08
 Identities = 55/175 (31%), Positives = 75/175 (42%), Gaps = 12/175 (6%)
 Frame = +1

Query: 40   PTSPRCCPPTTCPSLPLW-----PPSSSTAP--TLTPWPPCLAASAATPGPPTAPSPGRR 198
            PTS    PPTT PS P       PP+++ +P  T TP PP +  +  TP P T PSP   
Sbjct: 925  PTSTTTLPPTTTPSPPPTTTTTPPPTTTPSPPTTTTPSPPTITTT--TPPPTTTPSPPTT 982

Query: 199  PTTRPSARRPTSPGCTRATAPPDSKSAASAAWARSCGICSLALPGTSGMSAAGPTGRAA- 375
             TT P      SP  T    PP S +        S    +   P  +   +   T   + 
Sbjct: 983  TTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTPPPTTTPSPPTTTTPSP 1042

Query: 376  --LRTACRAPSTCPA--CTTRPWRARAPTRCSVTASTSTTTHPSAPASRPTSISS 528
                T    P+T P+   TT P    +P   ++T  + TTT PS+P +  T+ SS
Sbjct: 1043 PITTTTTPPPTTTPSSPITTTP----SPPTTTMTTPSPTTT-PSSPITTTTTPSS 1092

 Score = 60.8 bits (146), Expect = 2e-08
 Identities = 56/188 (29%), Positives = 74/188 (38%), Gaps = 19/188 (10%)
 Frame = +1

Query: 25   PTAARPTSPRCCPPTTCPSLPLWPPSSSTAPTLTPWPPCLAASAATPGPPTAPS------ 186
            P  +  T+P   PPTT PS P   PS    PT TP PP    +  TP P T PS      
Sbjct: 831  PPISTTTTP---PPTTTPSPPTTTPSP---PTTTPSPP--TTTTTTPPPTTTPSPPMTTP 882

Query: 187  --PGRRPTTRPSARRPTSPGCTRATAPPDSKSAASAAWARSCGICSLALPGTSGMSAAGP 360
              P    TT P    P+ P  T  T PP +  +       +    +  LP T+  S    
Sbjct: 883  ITPPASTTTLPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPSPPPT 942

Query: 361  TGRAALRTACRAP--STCPACTTRPWRARAPTRCSVTASTSTTTHP---------SAPAS 507
            T      T   +P  +T P+  T       PT      +T+TTT P         + P +
Sbjct: 943  TTTTPPPTTTPSPPTTTTPSPPTITTTTPPPTTTPSPPTTTTTTPPPTTTPSPPTTTPIT 1002

Query: 508  RPTSISSL 531
             PTS ++L
Sbjct: 1003 PPTSTTTL 1010

 Score = 60.5 bits (145), Expect = 2e-08
 Identities = 51/155 (32%), Positives = 67/155 (42%), Gaps = 4/155 (2%)
 Frame = +1

Query: 61   PPTTCPSLPLWPPSSSTA--PTLTPWPPCLAASAATPGPPTAPSPGRRPTTRPSARRPTS 234
            PPTT PS P   P+++T   PT TP PP    +  TP P T PSP    TT P      S
Sbjct: 776  PPTTTPSPP---PTTTTTLPPTTTPSPP--TTTTTTPPPTTTPSPPITTTTTPLPTTTPS 830

Query: 235  PGCTRATAPPDSKSAASAAWARSCGICSLALPGTSGMSAAGPTGRAALRTACRAPSTCPA 414
            P  +  T PP + + +      S    + + P T+  +    T  +   T    P T PA
Sbjct: 831  PPISTTTTPPPTTTPSPPTTTPSPPTTTPSPPTTTTTTPPPTTTPSPPMT---TPITPPA 887

Query: 415  CTTR--PWRARAPTRCSVTASTSTTTHPSAPASRP 513
             TT   P    +P   + T    TTT PS P + P
Sbjct: 888  STTTLPPTTTPSPPTTTTTTPPPTTT-PSPPTTTP 921

>gb|AAA59875.1| mucin
          Length = 573

 Score = 67.8 bits (164), Expect = 1e-10
 Identities = 62/214 (28%), Positives = 83/214 (37%), Gaps = 32/214 (14%)
 Frame = +1

Query: 1   PRLWAFSGPTAARPTSPRCC----PPTTCPS----LPLWPPSSSTA--PTLTPWPPCLAA 150
           P +   + P    P+ P       PPTT PS     P+ PP+S+T   PT TP PP    
Sbjct: 247 PTITTTTPPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPSPP--PT 304

Query: 151 SAATPGPPTAPSPG---------RRPTTRPSARRPTSPGCTRATAPPDSKSAASAAWARS 303
           +  TP P T PSP             TT P    P+SP  T  + P  + +  S     S
Sbjct: 305 TTTTPPPTTTPSPPTTTTPSPPITTTTTPPPTTTPSSPITTTPSPPTTTMTTPSPTTTPS 364

Query: 304 CGICSLALPGTSGMSAAGPTGRAALRTACRAPSTCPACTTRPWRARAPTRCSVTASTSTT 483
             I +   P ++   +  PT          +P+T P+  T       PT    T S+  T
Sbjct: 365 SPITTTTTPSSTTTPSPPPT-----TMTTPSPTTTPSPPTTTMTTLPPT----TTSSPLT 415

Query: 484 THPSAPASRPTSIS------------SLC-WTGW 546
           T P  P+  P + S             LC WTGW
Sbjct: 416 TTPLPPSITPPTFSPFSTTTPTTPCVPLCNWTGW 449

 Score = 67.0 bits (162), Expect = 2e-10
 Identities = 56/176 (31%), Positives = 74/176 (41%), Gaps = 8/176 (4%)
 Frame = +1

Query: 25  PTAARPTSPRCCPPTTCPS----LPLWPPSSSTA--PTLTPWPPCLAASAATPGPPTAPS 186
           P     T+P   PPTT PS     P+ PP+S+T   PT TP PP    +  TP P T PS
Sbjct: 144 PPTTTTTTP---PPTTTPSPPTTTPITPPASTTTLPPTTTPSPP--TTTTTTPPPTTTPS 198

Query: 187 PGRRPTTRPSARRPTSPGCTRATAPPDSKSAASAAWARSCGICSLALPGTSGMSAAGPTG 366
           P       P     T P  T  + PP + +        S    +   P T   +   PT 
Sbjct: 199 PPTTTPITPPTSTTTLPPTTTPSPPPTTTTTPPPTTTPSPPTTTTPSPPTITTTTPPPTT 258

Query: 367 RAALRTACRAPSTCPACTTRPWRARAPTRCSVTASTSTTTHP--SAPASRPTSISS 528
             +  T     +T P  TT P     PT   +T  TSTTT P  + P+  PT+ ++
Sbjct: 259 TPSPPT---TTTTTPPPTTTP---SPPTTTPITPPTSTTTLPPTTTPSPPPTTTTT 308

 Score = 66.6 bits (161), Expect = 3e-10
 Identities = 55/171 (32%), Positives = 74/171 (43%), Gaps = 8/171 (4%)
 Frame = +1

Query: 40  PTSPRCCPPTTCPSLPLWPPSSSTA---PTLTPWPPCLAASAATPGPPTAPSPGRRPTTR 210
           PTS    PPTT PS    PP+++T    PT TP PP    +  TP P T PSP    TT 
Sbjct: 68  PTSTTTLPPTTTPS----PPTTTTTTPPPTTTPSPPI--TTTTTPPPTTTPSPPISTTTT 121

Query: 211 PSARRPTSPGCTRATAPPDSKSAASAAWARSCGICSLALPGTSGMSAAGPTGRAALRTAC 390
           P      SP  T  + P  + S  +          + + P T+ ++    T      T  
Sbjct: 122 PPPTTTPSPPTTTPSPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPASTTTLPPTTTP 181

Query: 391 RAP---STCPACTTRPWRARAPTRCSVTASTSTTTHP--SAPASRPTSISS 528
             P   +T P  TT P     PT   +T  TSTTT P  + P+  PT+ ++
Sbjct: 182 SPPTTTTTTPPPTTTP---SPPTTTPITPPTSTTTLPPTTTPSPPPTTTTT 229

 Score = 63.2 bits (152), Expect = 3e-09
 Identities = 57/182 (31%), Positives = 73/182 (39%), Gaps = 14/182 (7%)
 Frame = +1

Query: 19  SGPTAARPTSPRCC----PPTTCPSLPLWPPSSSTA---PTLTPWPPCLA-----ASAAT 162
           S PT   P+ P       PPTT PS    PP+++T    PT TP PP         S  T
Sbjct: 237 SPPTTTTPSPPTITTTTPPPTTTPS----PPTTTTTTPPPTTTPSPPTTTPITPPTSTTT 292

Query: 163 PGPPTAPSPGRRPTTRPSARRPTSPGCTRATAPP-DSKSAASAAWARSCGICSLALPGTS 339
             P T PSP    TT P      SP  T   +PP  + +        S  I +   P T+
Sbjct: 293 LPPTTTPSPPPTTTTTPPPTTTPSPPTTTTPSPPITTTTTPPPTTTPSSPITTTPSPPTT 352

Query: 340 GMSAAGPTGRAALRTACRAPSTCPACTTRPWRARAPTRCSVTAST-STTTHPSAPASRPT 516
            M+   PT           PS+    TT P     P+    T +T S TT PS P +  T
Sbjct: 353 TMTTPSPT---------TTPSSPITTTTTPSSTTTPSPPPTTMTTPSPTTTPSPPTTTMT 403

Query: 517 SI 522
           ++
Sbjct: 404 TL 405

 Score = 62.4 bits (150), Expect = 6e-09
 Identities = 53/155 (34%), Positives = 68/155 (43%), Gaps = 4/155 (2%)
 Frame = +1

Query: 61  PPTTCPSLPLWPPSSSTA--PTLTPWPPCLAASAATPGPPTAPSPGRRPTTRPSARRPTS 234
           PPTT PS P   P+S+T   PT TP PP    +  TP P T PSP    TT P      S
Sbjct: 59  PPTTTPSPP---PTSTTTLPPTTTPSPP--TTTTTTPPPTTTPSPPITTTTTPPPTTTPS 113

Query: 235 PGCTRATAPPDSKSAASAAWARSCGICSLALPGTSGMSAAGPTGRAALRTACRAPSTCPA 414
           P  +  T PP + + +      S    + + P T+  +   PT   +  T    P T PA
Sbjct: 114 PPISTTTTPPPTTTPSPPTTTPSPPTTTPS-PPTTTTTTPPPTTTPSPPTT--TPITPPA 170

Query: 415 CTTR--PWRARAPTRCSVTASTSTTTHPSAPASRP 513
            TT   P    +P   + T    TTT PS P + P
Sbjct: 171 STTTLPPTTTPSPPTTTTTTPPPTTT-PSPPTTTP 204

 Score = 61.6 bits (148), Expect = 1e-08
 Identities = 55/175 (31%), Positives = 75/175 (42%), Gaps = 12/175 (6%)
 Frame = +1

Query: 40  PTSPRCCPPTTCPSLPLW-----PPSSSTAP--TLTPWPPCLAASAATPGPPTAPSPGRR 198
           PTS    PPTT PS P       PP+++ +P  T TP PP +  +  TP P T PSP   
Sbjct: 208 PTSTTTLPPTTTPSPPPTTTTTPPPTTTPSPPTTTTPSPPTITTT--TPPPTTTPSPPTT 265

Query: 199 PTTRPSARRPTSPGCTRATAPPDSKSAASAAWARSCGICSLALPGTSGMSAAGPTGRAA- 375
            TT P      SP  T    PP S +        S    +   P  +   +   T   + 
Sbjct: 266 TTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTPPPTTTPSPPTTTTPSP 325

Query: 376 --LRTACRAPSTCPA--CTTRPWRARAPTRCSVTASTSTTTHPSAPASRPTSISS 528
               T    P+T P+   TT P    +P   ++T  + TTT PS+P +  T+ SS
Sbjct: 326 PITTTTTPPPTTTPSSPITTTP----SPPTTTMTTPSPTTT-PSSPITTTTTPSS 375

 Score = 61.6 bits (148), Expect = 1e-08
 Identities = 56/171 (32%), Positives = 70/171 (40%), Gaps = 6/171 (3%)
 Frame = +1

Query: 25  PTAARPTSPRCCPPTTCPS----LPLWPPSSSTA--PTLTPWPPCLAASAATPGPPTAPS 186
           P     T+P   PPTT PS     P+ PP+S+T   PT TP PP    +  TP P T PS
Sbjct: 183 PPTTTTTTP---PPTTTPSPPTTTPITPPTSTTTLPPTTTPSPP--PTTTTTPPPTTTPS 237

Query: 187 PGRRPTTRPSARRPTSPGCTRATAPPDSKSAASAAWARSCGICSLALPGTSGMSAAGPTG 366
           P       P+   P+ P  T  T PP +  +       +    +   P T+      PT 
Sbjct: 238 P-------PTTTTPSPPTITTTTPPPTTTPSPPTTTTTTPPPTTTPSPPTT-TPITPPTS 289

Query: 367 RAALRTACRAPSTCPACTTRPWRARAPTRCSVTASTSTTTHPSAPASRPTS 519
              L      PS  P  TT P     PT    T S  TTT PS P +  T+
Sbjct: 290 TTTL-PPTTTPSPPPTTTTTP----PPT---TTPSPPTTTTPSPPITTTTT 332

 Score = 60.8 bits (146), Expect = 2e-08
 Identities = 56/188 (29%), Positives = 74/188 (38%), Gaps = 19/188 (10%)
 Frame = +1

Query: 25  PTAARPTSPRCCPPTTCPSLPLWPPSSSTAPTLTPWPPCLAASAATPGPPTAPS------ 186
           P  +  T+P   PPTT PS P   PS    PT TP PP    +  TP P T PS      
Sbjct: 114 PPISTTTTP---PPTTTPSPPTTTPSP---PTTTPSPP--TTTTTTPPPTTTPSPPTTTP 165

Query: 187 --PGRRPTTRPSARRPTSPGCTRATAPPDSKSAASAAWARSCGICSLALPGTSGMSAAGP 360
             P    TT P    P+ P  T  T PP +  +       +    +  LP T+  S    
Sbjct: 166 ITPPASTTTLPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPSPPPT 225

Query: 361 TGRAALRTACRAP--STCPACTTRPWRARAPTRCSVTASTSTTTHP---------SAPAS 507
           T      T   +P  +T P+  T       PT      +T+TTT P         + P +
Sbjct: 226 TTTTPPPTTTPSPPTTTTPSPPTITTTTPPPTTTPSPPTTTTTTPPPTTTPSPPTTTPIT 285

Query: 508 RPTSISSL 531
            PTS ++L
Sbjct: 286 PPTSTTTL 293

>pir||A43932 mucin 2 precursor, intestinal - human (fragments)
          Length = 3020

 Score = 67.8 bits (164), Expect = 1e-10
 Identities = 62/214 (28%), Positives = 83/214 (37%), Gaps = 32/214 (14%)
 Frame = +1

Query: 1    PRLWAFSGPTAARPTSPRCC----PPTTCPS----LPLWPPSSSTA--PTLTPWPPCLAA 150
            P +   + P    P+ P       PPTT PS     P+ PP+S+T   PT TP PP    
Sbjct: 1589 PTITTTTPPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPSPP--PT 1646

Query: 151  SAATPGPPTAPSPG---------RRPTTRPSARRPTSPGCTRATAPPDSKSAASAAWARS 303
            +  TP P T PSP             TT P    P+SP  T  + P  + +  S     S
Sbjct: 1647 TTTTPPPTTTPSPPTTTTPSPPITTTTTPPPTTTPSSPITTTPSPPTTTMTTPSPTTTPS 1706

Query: 304  CGICSLALPGTSGMSAAGPTGRAALRTACRAPSTCPACTTRPWRARAPTRCSVTASTSTT 483
              I +   P ++   +  PT          +P+T P+  T       PT    T S+  T
Sbjct: 1707 SPITTTTTPSSTTTPSPPPT-----TMTTPSPTTTPSPPTTTMTTLPPT----TTSSPLT 1757

Query: 484  THPSAPASRPTSIS------------SLC-WTGW 546
            T P  P+  P + S             LC WTGW
Sbjct: 1758 TTPLPPSITPPTFSPFSTTTPTTPCVPLCNWTGW 1791

 Score = 67.0 bits (162), Expect = 2e-10
 Identities = 56/176 (31%), Positives = 74/176 (41%), Gaps = 8/176 (4%)
 Frame = +1

Query: 25   PTAARPTSPRCCPPTTCPS----LPLWPPSSSTA--PTLTPWPPCLAASAATPGPPTAPS 186
            P     T+P   PPTT PS     P+ PP+S+T   PT TP PP    +  TP P T PS
Sbjct: 1486 PPTTTTTTP---PPTTTPSPPMTTPITPPASTTTLPPTTTPSPP--TTTTTTPPPTTTPS 1540

Query: 187  PGRRPTTRPSARRPTSPGCTRATAPPDSKSAASAAWARSCGICSLALPGTSGMSAAGPTG 366
            P       P     T P  T  + PP + +        S    +   P T   +   PT 
Sbjct: 1541 PPTTTPITPPTSTTTLPPTTTPSPPPTTTTTPPPTTTPSPPTTTTPSPPTITTTTPPPTT 1600

Query: 367  RAALRTACRAPSTCPACTTRPWRARAPTRCSVTASTSTTTHP--SAPASRPTSISS 528
              +  T     +T P  TT P     PT   +T  TSTTT P  + P+  PT+ ++
Sbjct: 1601 TPSPPT---TTTTTPPPTTTP---SPPTTTPITPPTSTTTLPPTTTPSPPPTTTTT 1650

 Score = 64.7 bits (156), Expect = 1e-09
 Identities = 56/172 (32%), Positives = 76/172 (43%), Gaps = 4/172 (2%)
 Frame = +1

Query: 25   PTAARPTSPRCCPPTTCPSLPLWPPSSSTAPTLTPWPPCLAASAATPGPPTAPSPGRRPT 204
            P     T+P   PPTT PS P+   +++  PT TP PP   ++  TP P T PSP   PT
Sbjct: 1424 PPTTTTTTP---PPTTTPSPPI-TTTTTPLPTTTPSPP--ISTTTTPPPTTTPSP---PT 1474

Query: 205  TRPS--ARRPTSPGCTRATAPPDSKSAASAAWARSCGICSLALPGTSGMSAAGPTGRAAL 378
            T PS     P+ P  T  T PP +  +       +    +  LP T+  S    T     
Sbjct: 1475 TTPSPPTTTPSPPTTTTTTPPPTTTPSPPMTTPITPPASTTTLPPTTTPSPPTTT----- 1529

Query: 379  RTACRAPSTCPACTTRPWRARAPTRCSVTASTSTTTHP--SAPASRPTSISS 528
                   +T P  TT P     PT   +T  TSTTT P  + P+  PT+ ++
Sbjct: 1530 -------TTTPPPTTTP---SPPTTTPITPPTSTTTLPPTTTPSPPPTTTTT 1571

 Score = 63.2 bits (152), Expect = 3e-09
 Identities = 57/182 (31%), Positives = 73/182 (39%), Gaps = 14/182 (7%)
 Frame = +1

Query: 19   SGPTAARPTSPRCC----PPTTCPSLPLWPPSSSTA---PTLTPWPPCLA-----ASAAT 162
            S PT   P+ P       PPTT PS    PP+++T    PT TP PP         S  T
Sbjct: 1579 SPPTTTTPSPPTITTTTPPPTTTPS----PPTTTTTTPPPTTTPSPPTTTPITPPTSTTT 1634

Query: 163  PGPPTAPSPGRRPTTRPSARRPTSPGCTRATAPP-DSKSAASAAWARSCGICSLALPGTS 339
              P T PSP    TT P      SP  T   +PP  + +        S  I +   P T+
Sbjct: 1635 LPPTTTPSPPPTTTTTPPPTTTPSPPTTTTPSPPITTTTTPPPTTTPSSPITTTPSPPTT 1694

Query: 340  GMSAAGPTGRAALRTACRAPSTCPACTTRPWRARAPTRCSVTAST-STTTHPSAPASRPT 516
             M+   PT           PS+    TT P     P+    T +T S TT PS P +  T
Sbjct: 1695 TMTTPSPT---------TTPSSPITTTTTPSSTTTPSPPPTTMTTPSPTTTPSPPTTTMT 1745

Query: 517  SI 522
            ++
Sbjct: 1746 TL 1747

 Score = 61.6 bits (148), Expect = 1e-08
 Identities = 55/175 (31%), Positives = 75/175 (42%), Gaps = 12/175 (6%)
 Frame = +1

Query: 40   PTSPRCCPPTTCPSLPLW-----PPSSSTAP--TLTPWPPCLAASAATPGPPTAPSPGRR 198
            PTS    PPTT PS P       PP+++ +P  T TP PP +  +  TP P T PSP   
Sbjct: 1550 PTSTTTLPPTTTPSPPPTTTTTPPPTTTPSPPTTTTPSPPTITTT--TPPPTTTPSPPTT 1607

Query: 199  PTTRPSARRPTSPGCTRATAPPDSKSAASAAWARSCGICSLALPGTSGMSAAGPTGRAA- 375
             TT P      SP  T    PP S +        S    +   P  +   +   T   + 
Sbjct: 1608 TTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTPPPTTTPSPPTTTTPSP 1667

Query: 376  --LRTACRAPSTCPA--CTTRPWRARAPTRCSVTASTSTTTHPSAPASRPTSISS 528
                T    P+T P+   TT P    +P   ++T  + TTT PS+P +  T+ SS
Sbjct: 1668 PITTTTTPPPTTTPSSPITTTP----SPPTTTMTTPSPTTT-PSSPITTTTTPSS 1717

 Score = 61.6 bits (148), Expect = 1e-08
 Identities = 56/171 (32%), Positives = 70/171 (40%), Gaps = 6/171 (3%)
 Frame = +1

Query: 25   PTAARPTSPRCCPPTTCPS----LPLWPPSSSTA--PTLTPWPPCLAASAATPGPPTAPS 186
            P     T+P   PPTT PS     P+ PP+S+T   PT TP PP    +  TP P T PS
Sbjct: 1525 PPTTTTTTP---PPTTTPSPPTTTPITPPTSTTTLPPTTTPSPP--PTTTTTPPPTTTPS 1579

Query: 187  PGRRPTTRPSARRPTSPGCTRATAPPDSKSAASAAWARSCGICSLALPGTSGMSAAGPTG 366
            P       P+   P+ P  T  T PP +  +       +    +   P T+      PT 
Sbjct: 1580 P-------PTTTTPSPPTITTTTPPPTTTPSPPTTTTTTPPPTTTPSPPTT-TPITPPTS 1631

Query: 367  RAALRTACRAPSTCPACTTRPWRARAPTRCSVTASTSTTTHPSAPASRPTS 519
               L      PS  P  TT P     PT    T S  TTT PS P +  T+
Sbjct: 1632 TTTL-PPTTTPSPPPTTTTTP----PPT---TTPSPPTTTTPSPPITTTTT 1674

 Score = 60.8 bits (146), Expect = 2e-08
 Identities = 56/188 (29%), Positives = 74/188 (38%), Gaps = 19/188 (10%)
 Frame = +1

Query: 25   PTAARPTSPRCCPPTTCPSLPLWPPSSSTAPTLTPWPPCLAASAATPGPPTAPS------ 186
            P  +  T+P   PPTT PS P   PS    PT TP PP    +  TP P T PS      
Sbjct: 1456 PPISTTTTP---PPTTTPSPPTTTPSP---PTTTPSPP--TTTTTTPPPTTTPSPPMTTP 1507

Query: 187  --PGRRPTTRPSARRPTSPGCTRATAPPDSKSAASAAWARSCGICSLALPGTSGMSAAGP 360
              P    TT P    P+ P  T  T PP +  +       +    +  LP T+  S    
Sbjct: 1508 ITPPASTTTLPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPSPPPT 1567

Query: 361  TGRAALRTACRAP--STCPACTTRPWRARAPTRCSVTASTSTTTHP---------SAPAS 507
            T      T   +P  +T P+  T       PT      +T+TTT P         + P +
Sbjct: 1568 TTTTPPPTTTPSPPTTTTPSPPTITTTTPPPTTTPSPPTTTTTTPPPTTTPSPPTTTPIT 1627

Query: 508  RPTSISSL 531
             PTS ++L
Sbjct: 1628 PPTSTTTL 1635

 Score = 60.5 bits (145), Expect = 2e-08
 Identities = 51/155 (32%), Positives = 67/155 (42%), Gaps = 4/155 (2%)
 Frame = +1

Query: 61   PPTTCPSLPLWPPSSSTA--PTLTPWPPCLAASAATPGPPTAPSPGRRPTTRPSARRPTS 234
            PPTT PS P   P+++T   PT TP PP    +  TP P T PSP    TT P      S
Sbjct: 1401 PPTTTPSPP---PTTTTTLPPTTTPSPP--TTTTTTPPPTTTPSPPITTTTTPLPTTTPS 1455

Query: 235  PGCTRATAPPDSKSAASAAWARSCGICSLALPGTSGMSAAGPTGRAALRTACRAPSTCPA 414
            P  +  T PP + + +      S    + + P T+  +    T  +   T    P T PA
Sbjct: 1456 PPISTTTTPPPTTTPSPPTTTPSPPTTTPSPPTTTTTTPPPTTTPSPPMT---TPITPPA 1512

Query: 415  CTTR--PWRARAPTRCSVTASTSTTTHPSAPASRP 513
             TT   P    +P   + T    TTT PS P + P
Sbjct: 1513 STTTLPPTTTPSPPTTTTTTPPPTTT-PSPPTTTP 1546

 Score = 43.5 bits (101), Expect = 0.003
 Identities = 40/158 (25%), Positives = 60/158 (37%), Gaps = 4/158 (2%)
 Frame = +1

Query: 67   TTCPSLPLWPPSSSTAPTLTPWPPCLAASAATPGPPTAPSPGRRPTTRPSARRPTSPGCT 246
            TT    P   P+S+ + T+TP       +A TP P    +P   P +  +   PT    T
Sbjct: 1975 TTTTMTPTPTPTSTKSTTVTPITTTTTVTA-TPTPTGTQTPTMIPISTTTTVTPTPTPTT 2033

Query: 247  RATAPPDSKSAASAAWARSCGICSLALPGTSGMSAAGPTGRAALRTACRAPSTCPACTTR 426
             +T PP   S A  A   +      +    +  S + P   +    +   P+     T  
Sbjct: 2034 GSTGPPTHTSTAPIAELTTSNPPPESSTPQTSRSTSSPLTESTTLLSTLPPAIEMTSTAP 2093

Query: 427  PWRARAPTRCS----VTASTSTTTHPSAPASRPTSISS 528
            P    APT  S    ++   STTT P    +R T+  S
Sbjct: 2094 PSTPTAPTTTSGGHTLSPPPSTTTSPPGTPTRGTTTGS 2131

 Score = 42.0 bits (97), Expect = 0.008
 Identities = 50/178 (28%), Positives = 64/178 (35%), Gaps = 9/178 (5%)
 Frame = +1

Query: 34   ARPTSPRCCPPTTCPSLPLWPPSSSTAPTLTPWPPCLAASAATPGPPTAPSPGRRPTTRP 213
            A PT      PT  P         ST  T+TP P     +  + GPPT  S      T P
Sbjct: 2004 ATPTPTGTQTPTMIP--------ISTTTTVTPTP---TPTTGSTGPPTHTS------TAP 2046

Query: 214  SARRPTSPGCTRATAPPDSKSAASAAWARSCGICSLALPGTSGMSAAGPTGRAALRTACR 393
             A   TS     ++ P  S+S +S     S  + S   P     S A P+   A  T   
Sbjct: 2047 IAELTTSNPPPESSTPQTSRSTSSPL-TESTTLLSTLPPAIEMTSTAPPSTPTAPTTTSG 2105

Query: 394  APSTCPACTTRPWRARAPTRCSVTASTS---------TTTHPSAPASRPTSISSLCWT 540
              +  P  +T       PTR + T S+S         TTT    P   P S  S+  T
Sbjct: 2106 GHTLSPPPSTTTSPPGTPTRGTTTGSSSAPTPSTVQTTTTSAWTPTPTPLSTPSIIRT 2163

 Score = 42.0 bits (97), Expect = 0.008
 Identities = 46/172 (26%), Positives = 63/172 (35%), Gaps = 9/172 (5%)
 Frame = +1

Query: 28   TAARPTSPRCCPPTTCPSLPLWPPSSSTAPTLTPWPPCLAASAATPGPPTAPSPGRRPTT 207
            T+  P S    P TT     L PP S+T       PP       T G  +AP+P    TT
Sbjct: 2089 TSTAPPSTPTAPTTTSGGHTLSPPPSTTTS-----PPGTPTRGTTTGSSSAPTPSTVQTT 2143

Query: 208  RPSARRPTSPGCTRATAPPDSKSAASAAWARSCGICSLA-----LPGTSGMSAAGPTGRA 372
              SA  PT    T  + P   ++     +  S  IC +       PG    +  G  G  
Sbjct: 2144 TTSAWTPTP---TPLSTPSIIRTTGLRPYPSSVLICCVLNDTYYAPGEEVYN--GTYGDT 2198

Query: 373  ALRTACRAPSTCP----ACTTRPWRARAPTRCSVTASTSTTTHPSAPASRPT 516
                 C    T      +C + P     P++     ST T + PS+  S+PT
Sbjct: 2199 CYFVNCSLSCTLEFYNWSCPSTPSPTPTPSK-----STPTPSKPSSTPSKPT 2245

 Score = 39.3 bits (90), Expect = 0.053
 Identities = 32/95 (33%), Positives = 41/95 (42%), Gaps = 3/95 (3%)
 Frame = +1

Query: 19   SGPTAARPTSPRCCPPTTCPS-LPLWPPSSSTAPTLTPWPPCLAASAAT--PGPPTAPSP 189
            S P  +R TS      TT  S LP     +STAP  TP  P   +   T  P P T  SP
Sbjct: 2060 STPQTSRSTSSPLTESTTLLSTLPPAIEMTSTAPPSTPTAPTTTSGGHTLSPPPSTTTSP 2119

Query: 190  GRRPTTRPSARRPTSPGCTRATAPPDSKSAASAAW 294
               PT      R T+ G + A  P   ++  ++AW
Sbjct: 2120 PGTPT------RGTTTGSSSAPTPSTVQTTTTSAW 2148



EST assemble image


clone accession position
1 HC094e05_r AV639062 1 499
2 CM006d09_r AV387209 41 566
3 HC005d04_r AV632214 162 668




Chlamydomonas reinhardtii
Kazusa DNA Research Institute