Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC000954A_C01 KCC000954A_c01
(1704 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
prf||1808328A CF1 ATP synthase:SUBUNIT=gamma 496 e-139
sp|P12113|ATPG_CHLRE ATP synthase gamma chain, chloroplast precu... 493 e-138
ref|NP_567265.1| ATP synthase gamma chain 1, chloroplast (H(+)-t... 288 e-104
sp|P05435|ATPG_SPIOL ATP synthase gamma chain, chloroplast precu... 289 e-103
emb|CAA68727.1| ATP synthase [Spinacia oleracea] 289 e-103
>prf||1808328A CF1 ATP synthase:SUBUNIT=gamma
Length = 358
Score = 496 bits (1277), Expect = e-139
Identities = 279/364 (76%), Positives = 288/364 (78%), Gaps = 4/364 (1%)
Frame = +2
Query: 26 MAAMLASKQGAFMGRSSFAPRPPRAVASRRLPAGGGRPEGGPAIASPR*RTPRRSPMP*S 205
MAAMLASKQGAFMGRSSFAP P + L G E IAS + M
Sbjct: 1 MAAMLASKQGAFMGRSSFAPAPKGVASRASLQVVAGLKEVRDRIASVKNTQKITDAMK-- 58
Query: 206 WWLPLRSAVLRRLW*TAAPSRRTWSRSSTA*TSASARRMWTR----PCALSAPSSRCCWL 373
L +A R A + RT+S + +R+ P P +
Sbjct: 59 ----LVAAAKVRRAQEAVVNGRTFSENLVKVLYGVNQRVRQEDVDSPLCAVRPVKSVLLV 114
Query: 374 C*PGDRGLCGGYNNFIIKKTEARYRELTAMGVKVNLVCVGRKGAQYFARRKQYNIVKSFS 553
GDRGLCGGYNNFIIKKTEARYRELTAMGVKVNLVCVGRKGAQYFARRKQYNIVKSFS
Sbjct: 115 VLTGDRGLCGGYNNFIIKKTEARYRELTAMGVKVNLVCVGRKGAQYFARRKQYNIVKSFS 174
Query: 554 LGAAPSTKEAQGIADEIFASFIAQESDKVELVFTKFISLINSNPTIQTLLPMTPMGELCD 733
LGAAPSTKEAQGIADEIFASFIAQESDKVELVFTKFISLINSNPTIQTLLPMTPMGELCD
Sbjct: 175 LGAAPSTKEAQGIADEIFASFIAQESDKVELVFTKFISLINSNPTIQTLLPMTPMGELCD 234
Query: 734 VDGKCVDAADDEIFKLTTKGGEFAVEREKTTIETEALDPSLIFEQEPAQILDALLPLYMS 913
VDGKCVDAADDEIFKLTTKGGEFAVEREKTTIETEALDPSLIFEQEPAQILDALLPLYMS
Sbjct: 235 VDGKCVDAADDEIFKLTTKGGEFAVEREKTTIETEALDPSLIFEQEPAQILDALLPLYMS 294
Query: 914 SCLLRSLQEALASELAARMNAMNNASDNAKELKKGLTVQYNKQRQAKITQELAEIVGGAA 1093
SCLLRSLQEALASELAARMNAMNNASDNAKELKKGLTVQYNKQRQAKITQELAEIVGGAA
Sbjct: 295 SCLLRSLQEALASELAARMNAMNNASDNAKELKKGLTVQYNKQRQAKITQELAEIVGGAA 354
Query: 1094 ATSG 1105
ATSG
Sbjct: 355 ATSG 358
Score = 142 bits (359), Expect = 1e-32
Identities = 75/76 (98%), Positives = 75/76 (98%)
Frame = +1
Query: 154 DRIASVKNTQKITDAMKLVAAAKVRRAQEAVVNGRPFSENLVKVLYGVNQRVRQEDVDSP 333
DRIASVKNTQKITDAMKLVAAAKVRRAQEAVVNGR FSENLVKVLYGVNQRVRQEDVDSP
Sbjct: 42 DRIASVKNTQKITDAMKLVAAAKVRRAQEAVVNGRTFSENLVKVLYGVNQRVRQEDVDSP 101
Query: 334 LCAVRPVKSVLLVVLT 381
LCAVRPVKSVLLVVLT
Sbjct: 102 LCAVRPVKSVLLVVLT 117
>sp|P12113|ATPG_CHLRE ATP synthase gamma chain, chloroplast precursor gi|67881|pir||PWKMG
H+-transporting two-sector ATPase (EC 3.6.3.14) gamma
chain precursor, chloroplast - Chlamydomonas reinhardtii
gi|167403|gb|AAA33079.1| ATP synthase gamma-subunit
gi|167405|gb|AAA33080.1| ATP synthase precursor
Length = 358
Score = 493 bits (1270), Expect = e-138
Identities = 278/364 (76%), Positives = 287/364 (78%), Gaps = 4/364 (1%)
Frame = +2
Query: 26 MAAMLASKQGAFMGRSSFAPRPPRAVASRRLPAGGGRPEGGPAIASPR*RTPRRSPMP*S 205
MAAMLASKQGAFMGRSSFAP P + L G E IAS + M
Sbjct: 1 MAAMLASKQGAFMGRSSFAPAPKGVASRGSLQVVAGLKEVRDRIASVKNTQKITDAMK-- 58
Query: 206 WWLPLRSAVLRRLW*TAAPSRRTWSRSSTA*TSASARRMWTR----PCALSAPSSRCCWL 373
L +A R A + R +S + +R+ P P +
Sbjct: 59 ----LVAAAKVRRAQEAVVNGRPFSENLVKVLYGVNQRVRQEDVDSPLCAVRPVKSVLLV 114
Query: 374 C*PGDRGLCGGYNNFIIKKTEARYRELTAMGVKVNLVCVGRKGAQYFARRKQYNIVKSFS 553
GDRGLCGGYNNFIIKKTEARYRELTAMGVKVNLVCVGRKGAQYFARRKQYNIVKSFS
Sbjct: 115 VLTGDRGLCGGYNNFIIKKTEARYRELTAMGVKVNLVCVGRKGAQYFARRKQYNIVKSFS 174
Query: 554 LGAAPSTKEAQGIADEIFASFIAQESDKVELVFTKFISLINSNPTIQTLLPMTPMGELCD 733
LGAAPSTKEAQGIADEIFASFIAQESDKVELVFTKFISLINSNPTIQTLLPMTPMGELCD
Sbjct: 175 LGAAPSTKEAQGIADEIFASFIAQESDKVELVFTKFISLINSNPTIQTLLPMTPMGELCD 234
Query: 734 VDGKCVDAADDEIFKLTTKGGEFAVEREKTTIETEALDPSLIFEQEPAQILDALLPLYMS 913
VDGKCVDAADDEIFKLTTKGGEFAVEREKTTIETEALDPSLIFEQEPAQILDALLPLYMS
Sbjct: 235 VDGKCVDAADDEIFKLTTKGGEFAVEREKTTIETEALDPSLIFEQEPAQILDALLPLYMS 294
Query: 914 SCLLRSLQEALASELAARMNAMNNASDNAKELKKGLTVQYNKQRQAKITQELAEIVGGAA 1093
SCLLRSLQEALASELAARMNAMNNASDNAKELKKGLTVQYNKQRQAKITQELAEIVGGAA
Sbjct: 295 SCLLRSLQEALASELAARMNAMNNASDNAKELKKGLTVQYNKQRQAKITQELAEIVGGAA 354
Query: 1094 ATSG 1105
ATSG
Sbjct: 355 ATSG 358
Score = 145 bits (367), Expect = 2e-33
Identities = 76/76 (100%), Positives = 76/76 (100%)
Frame = +1
Query: 154 DRIASVKNTQKITDAMKLVAAAKVRRAQEAVVNGRPFSENLVKVLYGVNQRVRQEDVDSP 333
DRIASVKNTQKITDAMKLVAAAKVRRAQEAVVNGRPFSENLVKVLYGVNQRVRQEDVDSP
Sbjct: 42 DRIASVKNTQKITDAMKLVAAAKVRRAQEAVVNGRPFSENLVKVLYGVNQRVRQEDVDSP 101
Query: 334 LCAVRPVKSVLLVVLT 381
LCAVRPVKSVLLVVLT
Sbjct: 102 LCAVRPVKSVLLVVLT 117
>ref|NP_567265.1| ATP synthase gamma chain 1, chloroplast (H(+)-transporting two-sector
ATPase/F(1)-ATPase/ATPC1) [Arabidopsis thaliana]
gi|461550|sp|Q01908|ATP1_ARATH ATP synthase gamma chain
1, chloroplast precursor gi|81635|pir||B39732
H+-transporting two-sector ATPase (EC 3.6.3.14) gamma-1
chain precursor, chloroplast - Arabidopsis thaliana
gi|166632|gb|AAA32753.1| ATP synthase gamma-subunit
gi|5732056|gb|AAD48955.1|AF149414_4 Arabidopsis thaliana
APC1-ATP synthase gamma chain 1 (GB:M61741); contains
similarity to Pfam PF00231 -ATP synthase; score=658.6,
E=3.1e-194n n+1 gi|7267222|emb|CAB80829.1| AT4g04640
[Arabidopsis thaliana]
gi|16226524|gb|AAL16191.1|AF428422_1 AT4g04640/T19J18_4
[Arabidopsis thaliana] gi|17473929|gb|AAL38375.1| unknown
protein [Arabidopsis thaliana] gi|20148353|gb|AAM10067.1|
unknown protein [Arabidopsis thaliana]
gi|21594056|gb|AAM65974.1| ATP synthase gamma-subunit,
putative [Arabidopsis thaliana]
Length = 373
Score = 288 bits (738), Expect(2) = e-104
Identities = 140/238 (58%), Positives = 183/238 (76%)
Frame = +2
Query: 383 GDRGLCGGYNNFIIKKTEARYRELTAMGVKVNLVCVGRKGAQYFARRKQYNIVKSFSLGA 562
GDRGLCGG+NNFIIKK EAR +EL +G++ ++ VG+KG YF RR + K G
Sbjct: 134 GDRGLCGGFNNFIIKKAEARIKELKGLGLEYTVISVGKKGNSYFLRRPYIPVDKYLEAGT 193
Query: 563 APSTKEAQGIADEIFASFIAQESDKVELVFTKFISLINSNPTIQTLLPMTPMGELCDVDG 742
P+ KEAQ +AD++F+ FI++E DKVEL++TKF+SL+ S P I TLLP++P GE+CD++G
Sbjct: 194 LPTAKEAQAVADDVFSLFISEEVDKVELLYTKFVSLVKSEPVIHTLLPLSPKGEICDING 253
Query: 743 KCVDAADDEIFKLTTKGGEFAVEREKTTIETEALDPSLIFEQEPAQILDALLPLYMSSCL 922
CVDAA+DE F+LTTK G+ VERE T P L FEQ+P QILDALLPLY++S +
Sbjct: 254 TCVDAAEDEFFRLTTKEGKLTVERETFRTPTADFSPILQFEQDPVQILDALLPLYLNSQI 313
Query: 923 LRSLQEALASELAARMNAMNNASDNAKELKKGLTVQYNKQRQAKITQELAEIVGGAAA 1096
LR+LQE+LASELAARM+AM++ASDNA +LKK L++ YN++RQAKIT E+ EIV GA A
Sbjct: 314 LRALQESLASELAARMSAMSSASDNASDLKKSLSMVYNRKRQAKITGEILEIVAGANA 371
Score = 114 bits (285), Expect(2) = e-104
Identities = 59/80 (73%), Positives = 68/80 (84%)
Frame = +1
Query: 142 RRSGDRIASVKNTQKITDAMKLVAAAKVRRAQEAVVNGRPFSENLVKVLYGVNQRVRQED 321
R DRI SVKNTQKIT+AMKLVAAAKVRRAQEAVVNGRPFSE LV+VLY +N++++ +D
Sbjct: 54 RELRDRIDSVKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFSETLVEVLYNINEQLQTDD 113
Query: 322 VDSPLCAVRPVKSVLLVVLT 381
VD PL VRPVK V LVV+T
Sbjct: 114 VDVPLTKVRPVKKVALVVVT 133
>sp|P05435|ATPG_SPIOL ATP synthase gamma chain, chloroplast precursor gi|67879|pir||PWSPG
H+-transporting two-sector ATPase (EC 3.6.3.14) gamma
chain precursor, chloroplast - spinach
gi|21238|emb|CAA35158.1| gamma-subunit of chloroplast ATP
synthase [Spinacia oleracea] gi|531111|emb|CAA53734.1|
gamma subunit of the chloroplast ATP synthase [Spinacia
oleracea]
Length = 364
Score = 289 bits (739), Expect(2) = e-103
Identities = 138/238 (57%), Positives = 185/238 (76%)
Frame = +2
Query: 383 GDRGLCGGYNNFIIKKTEARYRELTAMGVKVNLVCVGRKGAQYFARRKQYNIVKSFSLGA 562
GDRGLCGG+NN ++KK E+R EL +GV ++ +G+KG YF RR + + + F
Sbjct: 125 GDRGLCGGFNNMLLKKAESRIAELKKLGVDYTIISIGKKGNTYFIRRPEIPVDRYFDGTN 184
Query: 563 APSTKEAQGIADEIFASFIAQESDKVELVFTKFISLINSNPTIQTLLPMTPMGELCDVDG 742
P+ KEAQ IAD++F+ F+++E DKVE+++TKF+SL+ S+P I TLLP++P GE+CD++G
Sbjct: 185 LPTAKEAQAIADDVFSLFVSEEVDKVEMLYTKFVSLVKSDPVIHTLLPLSPKGEICDING 244
Query: 743 KCVDAADDEIFKLTTKGGEFAVEREKTTIETEALDPSLIFEQEPAQILDALLPLYMSSCL 922
KCVDAA+DE+F+LTTK G+ VER+ ET A P L FEQ+PAQILDALLPLY++S +
Sbjct: 245 KCVDAAEDELFRLTTKEGKLTVERDMIKTETPAFSPILEFEQDPAQILDALLPLYLNSQI 304
Query: 923 LRSLQEALASELAARMNAMNNASDNAKELKKGLTVQYNKQRQAKITQELAEIVGGAAA 1096
LR+LQE+LASELAARM AM+NA+DNA ELKK L++ YN+ RQAKIT E+ EIV GA A
Sbjct: 305 LRALQESLASELAARMTAMSNATDNANELKKTLSINYNRARQAKITGEILEIVAGANA 362
Score = 110 bits (276), Expect(2) = e-103
Identities = 57/80 (71%), Positives = 67/80 (83%)
Frame = +1
Query: 142 RRSGDRIASVKNTQKITDAMKLVAAAKVRRAQEAVVNGRPFSENLVKVLYGVNQRVRQED 321
R DRI SVKNTQKIT+AMKLVAAAKVRRAQEAVVNGRPFSE LV+VLY +N++++ ED
Sbjct: 45 RELRDRIGSVKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFSETLVEVLYNMNEQLQTED 104
Query: 322 VDSPLCAVRPVKSVLLVVLT 381
VD PL +R VK V L+V+T
Sbjct: 105 VDVPLTKIRTVKKVALMVVT 124
>emb|CAA68727.1| ATP synthase [Spinacia oleracea]
Length = 329
Score = 289 bits (739), Expect(2) = e-103
Identities = 138/238 (57%), Positives = 185/238 (76%)
Frame = +2
Query: 383 GDRGLCGGYNNFIIKKTEARYRELTAMGVKVNLVCVGRKGAQYFARRKQYNIVKSFSLGA 562
GDRGLCGG+NN ++KK E+R EL +GV ++ +G+KG YF RR + + + F
Sbjct: 90 GDRGLCGGFNNMLLKKAESRIAELKKLGVDYTIISIGKKGNTYFIRRPEIPVDRYFDGTN 149
Query: 563 APSTKEAQGIADEIFASFIAQESDKVELVFTKFISLINSNPTIQTLLPMTPMGELCDVDG 742
P+ KEAQ IAD++F+ F+++E DKVE+++TKF+SL+ S+P I TLLP++P GE+CD++G
Sbjct: 150 LPTAKEAQAIADDVFSLFVSEEVDKVEMLYTKFVSLVKSDPVIHTLLPLSPKGEICDING 209
Query: 743 KCVDAADDEIFKLTTKGGEFAVEREKTTIETEALDPSLIFEQEPAQILDALLPLYMSSCL 922
KCVDAA+DE+F+LTTK G+ VER+ ET A P L FEQ+PAQILDALLPLY++S +
Sbjct: 210 KCVDAAEDELFRLTTKEGKLTVERDMIKTETPAFSPILEFEQDPAQILDALLPLYLNSQI 269
Query: 923 LRSLQEALASELAARMNAMNNASDNAKELKKGLTVQYNKQRQAKITQELAEIVGGAAA 1096
LR+LQE+LASELAARM AM+NA+DNA ELKK L++ YN+ RQAKIT E+ EIV GA A
Sbjct: 270 LRALQESLASELAARMTAMSNATDNANELKKTLSINYNRARQAKITGEILEIVAGANA 327
Score = 110 bits (276), Expect(2) = e-103
Identities = 57/80 (71%), Positives = 67/80 (83%)
Frame = +1
Query: 142 RRSGDRIASVKNTQKITDAMKLVAAAKVRRAQEAVVNGRPFSENLVKVLYGVNQRVRQED 321
R DRI SVKNTQKIT+AMKLVAAAKVRRAQEAVVNGRPFSE LV+VLY +N++++ ED
Sbjct: 10 RELRDRIGSVKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFSETLVEVLYNMNEQLQTED 69
Query: 322 VDSPLCAVRPVKSVLLVVLT 381
VD PL +R VK V L+V+T
Sbjct: 70 VDVPLTKIRTVKKVALMVVT 89