Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC000918A_C01 KCC000918A_c01
(1173 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||T43481 probable mucin DKFZp434C196.1 - human (fragment) gi|... 47 5e-04
ref|XP_283575.1| similar to splicing coactivator subunit SRm300;... 45 0.003
ref|NP_476780.1| u-shaped CG2762-PA [Drosophila melanogaster] gi... 44 0.004
pir||T13850 gene u-shaped protein - fruit fly (Drosophila melano... 44 0.004
ref|ZP_00050082.1| hypothetical protein [Magnetospirillum magnet... 44 0.005
>pir||T43481 probable mucin DKFZp434C196.1 - human (fragment)
gi|6599134|emb|CAB63715.1| hypothetical protein [Homo
sapiens]
Length = 580
Score = 47.4 bits (111), Expect = 5e-04
Identities = 47/158 (29%), Positives = 63/158 (39%), Gaps = 9/158 (5%)
Frame = -1
Query: 1128 PPIATAALRPPNQQPHTPHTQLSGHQGTAKATPARASKRAGWWLWSDRPPSRPPPGRAHG 949
PP A+ +PP P TP ++ S + +A+P + RA P PP G
Sbjct: 82 PPRASPTRKPPRASPRTP-SRASPTRRLPRASPMGSPHRAS-------PMRTPPRASPTG 133
Query: 948 V--HGRPCGGPSS*GPARMPQNRTPK*RDTPPPA-AIASIRMAASAQALLRAALHATPPF 778
P G PSS P P +P TPP A A S A+ + RA+L PP
Sbjct: 134 TPSTASPTGTPSSASPTGTPPRASP--TGTPPRAWATRSPSTASLTRTPSRASLTRWPPR 191
Query: 777 MS------QETHELSHQPQPTHFDGLCGLVRSAVRGSP 682
S +E+ +SH+ PT R R SP
Sbjct: 192 ASPTRTPPRESPRMSHRASPTRTPPRASPTRRPPRASP 229
>ref|XP_283575.1| similar to splicing coactivator subunit SRm300; RNA binding protein;
AT-rich element binding factor [Homo sapiens] [Mus
musculus]
Length = 232
Score = 44.7 bits (104), Expect = 0.003
Identities = 34/125 (27%), Positives = 57/125 (45%), Gaps = 3/125 (2%)
Frame = -3
Query: 1171 PVTETAPRPPK---ASSSSDRDGSTAPSKSTAPYSPYSVVRTPGDRKGHSCPGQQTRRMV 1001
P T A +P K +SSSS S++ S S++ S +S + D +G S P Q V
Sbjct: 87 PSTLAALQPAKERRSSSSSSSSSSSSSSSSSSSSSSFSSGSSSSDSEGSSLPAQPE---V 143
Query: 1000 AMVRSPTIPPAPRQSARGARPAMRGALKLRTRTHAAEPHTQIT*HSASGCHCVDTNGRQR 821
A+ R P+ P P+++ R RP K + R+ ++ + + S+S ++
Sbjct: 144 ALKRVPSPTPVPKEAIREGRPQEPTLAKRKRRSSSSSSSSSSSSSSSSSSSSSSSSSSSS 203
Query: 820 PGTFK 806
P K
Sbjct: 204 PSPAK 208
>ref|NP_476780.1| u-shaped CG2762-PA [Drosophila melanogaster]
gi|22945566|gb|AAF51488.2| CG2762-PA [Drosophila
melanogaster]
Length = 1191
Score = 44.3 bits (103), Expect = 0.004
Identities = 32/98 (32%), Positives = 47/98 (47%), Gaps = 1/98 (1%)
Frame = -1
Query: 987 RPPSRPPPGRAHGVHGRPCGGPSS*GPARMPQNRTPK*RD-TPPPAAIASIRMAASAQAL 811
+P + P G G G G + A P +P+ R+ TP PA +A AA+A A
Sbjct: 376 KPDASPGAGSGPGSAGGSIGVSAQ---AATPGKLSPQARNKTPTPAMVAVAAAAAAAAAS 432
Query: 810 LRAALHATPPFMSQETHELSHQPQPTHFDGLCGLVRSA 697
L+A H+ PPF++ TH + P C L+R+A
Sbjct: 433 LQATPHSHPPFLALPTHPIIIVP--------CSLIRAA 462
>pir||T13850 gene u-shaped protein - fruit fly (Drosophila melanogaster)
gi|2597859|emb|CAA72991.1| u-shaped [Drosophila
melanogaster]
Length = 1191
Score = 44.3 bits (103), Expect = 0.004
Identities = 32/98 (32%), Positives = 47/98 (47%), Gaps = 1/98 (1%)
Frame = -1
Query: 987 RPPSRPPPGRAHGVHGRPCGGPSS*GPARMPQNRTPK*RD-TPPPAAIASIRMAASAQAL 811
+P + P G G G G + A P +P+ R+ TP PA +A AA+A A
Sbjct: 376 KPDASPGAGSGPGSAGGSIGVSAQ---AATPGKLSPQARNKTPTPAMVAVAAAAAAAAAS 432
Query: 810 LRAALHATPPFMSQETHELSHQPQPTHFDGLCGLVRSA 697
L+A H+ PPF++ TH + P C L+R+A
Sbjct: 433 LQATPHSHPPFLALPTHPIIIVP--------CSLIRAA 462
>ref|ZP_00050082.1| hypothetical protein [Magnetospirillum magnetotacticum]
Length = 188
Score = 43.9 bits (102), Expect = 0.005
Identities = 35/100 (35%), Positives = 44/100 (44%), Gaps = 1/100 (1%)
Frame = -1
Query: 1050 GTAKATPARASKRAGWWLWSDRPPSRPPPGRAHGVHGRPCGGPSS*GPARMPQNRTPK*R 871
GT A+PA A + AG P RP P P G PS+ GPAR + TP R
Sbjct: 2 GTRSASPACACEPAG--------PPRPAPRSGRWRWSAPSGRPSAGGPARHSPSCTPPSR 53
Query: 870 D-TPPPAAIASIRMAASAQALLRAALHATPPFMSQETHEL 754
PPP +I+ +A AL A PP + T E+
Sbjct: 54 SRRPPPPSISPDPFTLRRRA---PALGAVPPMILSTTDEI 90
