Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC000906A_C01 KCC000906A_c01
(657 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|P57999|ZAN_RABIT Zonadhesin gi|9887910|gb|AAF63342.2|AF244982... 41 0.014
gb|AAO51859.1| similar to Homo sapiens (Human). Mucin 2 precurso... 39 0.068
emb|CAD38614.1| hypothetical protein [Homo sapiens] 39 0.089
gb|AAH53101.1| Nuclear pore membrane protein 121 [Mus musculus] 38 0.12
ref|NP_683734.1| nuclear pore membrane protein 121 [Mus musculus... 38 0.12
>sp|P57999|ZAN_RABIT Zonadhesin gi|9887910|gb|AAF63342.2|AF244982_1 zonadhesin precursor
[Oryctolagus cuniculus]
Length = 2282
Score = 41.2 bits (95), Expect = 0.014
Identities = 54/220 (24%), Positives = 80/220 (35%), Gaps = 26/220 (11%)
Frame = -3
Query: 601 TTLKSKPQPSWTRAPGVPSRQ*VNDPKQANTRK--LRKSKPVHAPPEHNHSPLPLNLMTF 428
TT+ ++P T P VP+ +P T K + KP P E + +P T
Sbjct: 375 TTIPTEPPTVPTEPPTVPT-----EPPTVPTEKPTVLTEKPT-VPTEE--TSIPTEPPTV 426
Query: 427 AS*ARTLSTVRLVIHAQRLASARTKPEPSCTETPGQSKLDAAPQTTTRSQPGSMPPTKNQ 248
+ T++T + + A KP ET P TT RS S+ PT +
Sbjct: 427 PTEKPTVATEPPTVPTEEPTVATEKPTVPTEET--------TPPTTARSTLTSLEPTTHT 478
Query: 247 SLKLLPCCP*SNATRPS--------YAHFDAGSCPA--------------PRHTWRPHVM 134
L S T PS AH+++ +CPA P P ++
Sbjct: 479 PSTSLTSTTLSTTTTPSPTTVSCPANAHYESCACPASCKHPKASCKPPCQPGCVCDPGLV 538
Query: 133 SSNPSIVIVPTCGCIGFHGHPAPPTHHTYSRCT--CWCEP 20
SN S + +C C+ + + P CT C C P
Sbjct: 539 FSNNSCIKASSCPCLYNNNNYEPEAEWFSPNCTELCHCWP 578
>gb|AAO51859.1| similar to Homo sapiens (Human). Mucin 2 precursor (Intestinal
mucin 2) [Dictyostelium discoideum]
Length = 709
Score = 38.9 bits (89), Expect = 0.068
Identities = 37/157 (23%), Positives = 61/157 (38%), Gaps = 22/157 (14%)
Frame = -3
Query: 649 LSSTPALSPACASLY-------VTTLKSKPQPSWTRAPGVPSRQ*VNDPKQANTRKLRKS 491
+S+TP +P AS + + T S P + T+ P P++ P Q T +
Sbjct: 349 ISTTPTPTPTKASGFFGGFLGGINTPTSTPTQTSTQTP-TPTQTPTQTPTQTPTTQTPTP 407
Query: 490 KPVHAP---------------PEHNHSPLPLNLMTFAS*ARTLSTVRLVIHAQRLASART 356
P P P H+P P T +T + + Q +T
Sbjct: 408 TPTQTPTPTQTPTPTQTPTPTPTQTHTPTPTPTQTQTQ-TQTQTQTQNSTQTQTPTQTQT 466
Query: 355 KPEPSCTETPGQSKLDAAPQTTTRSQPGSMPPTKNQS 245
P+P+ T+T Q+ QT T++Q + PT+ Q+
Sbjct: 467 -PKPTQTQTQTQTPTQTPTQTQTQTQTQTQTPTQTQT 502
Score = 33.1 bits (74), Expect = 3.7
Identities = 39/151 (25%), Positives = 52/151 (33%), Gaps = 1/151 (0%)
Frame = -3
Query: 646 SSTPALSPACASLYVTTLKSKPQPSWTRAPGVPSRQ*VNDPKQANTRKLRKSKPVHAPPE 467
+ TP +P T P + T P Q P Q T K P
Sbjct: 476 TQTPTQTPTQTQTQTQTQTQTPTQTQTSTPTQTQTQ---TPTQTQTPK----------PT 522
Query: 466 HNHSPLPLNLMTFAS*ARTLSTVRLVIHAQRLASARTK-PEPSCTETPGQSKLDAAPQTT 290
+P P T T + I Q +T+ P P+ T+TP Q++ QT
Sbjct: 523 QTKTPTPTQTQTQTP---TQTQTPKPIQTQTQTPTQTQTPTPTQTQTPTQTQ----TQTP 575
Query: 289 TRSQPGSMPPTKNQSLKLLPCCP*SNATRPS 197
T +Q S PP N L+ P SN S
Sbjct: 576 TPTQTHSTPPPSNLLPGLIGFIPTSNTQSTS 606
>emb|CAD38614.1| hypothetical protein [Homo sapiens]
Length = 287
Score = 38.5 bits (88), Expect = 0.089
Identities = 61/244 (25%), Positives = 86/244 (35%), Gaps = 29/244 (11%)
Frame = -3
Query: 652 QLSSTPALSPACASLYVTTLKSKPQPSWTRAPGVPSRQ*VNDPKQANT--RKLRKSKPVH 479
+L+ P L+P T L++ P P P + QA+ +P
Sbjct: 54 RLTPRPTLAPTLQ----THLQAHPAPHSRLTPRPTPAPTLQTHLQAHPVPHSRLTPRPTP 109
Query: 478 APPEHNH---SPLPLNLMTFAS*ARTLSTVRLVIHAQRLASARTKPEPSCTETPGQSKLD 308
AP H H P+P + +T R L H Q S T P+ + P S+L
Sbjct: 110 APTLHTHLQAHPVPHSRLT----RRPTPAPTLQTHLQAHPSPHTPDSPAGSPQPPHSRLT 165
Query: 307 A----------------APQTTTRSQPGSMPPTKNQSLKLLPCCP*SNATR-PSYAHFDA 179
AP + +P ++ + +L+ P S TR P++ H A
Sbjct: 166 RRPTPAPTLQTHLQAHPAPHSRLTRRPHTLDSSAGPTLRTHLQAPHSGLTRRPTWPHPLA 225
Query: 178 GSCPAPRHTWRPHVMSSNPSIVIVPTCGCIGFHGHPAPPTH------HTYSRCTC-WCEP 20
GSC PRH S S + H PPTH H+ C C WC P
Sbjct: 226 GSC--PRHL-------SRTSFTFSQMLPWVERH----PPTHAFSPLLHSLPACVCVWC-P 271
Query: 19 SNVP 8
S P
Sbjct: 272 SCPP 275
>gb|AAH53101.1| Nuclear pore membrane protein 121 [Mus musculus]
Length = 1200
Score = 38.1 bits (87), Expect = 0.12
Identities = 33/128 (25%), Positives = 50/128 (38%), Gaps = 1/128 (0%)
Frame = -3
Query: 637 PALSPACASLYVTTLKSKPQPSWTRAPGVPSRQ*VNDPKQANTRKLRKSKPVHAPPEHNH 458
P +SP L T+ SKP ++ S + D K + + +S V P
Sbjct: 610 PLVSPLAGPLASTSSDSKPAATFLGLASASSITPLTDSKSSGVSQAEQS--VSTPASTAS 667
Query: 457 SPLPLNLMTFAS*ARTLSTVRLVIHAQRLASARTKP-EPSCTETPGQSKLDAAPQTTTRS 281
SP P M F + S+ L A AS KP P+ ++ S L ++ T +
Sbjct: 668 SPTPKPSMLFGMLSPPASSSSLATPAPACASPMFKPIFPATPKSESDSPLPSSSSAATTA 727
Query: 280 QPGSMPPT 257
+ PPT
Sbjct: 728 SSSTAPPT 735
>ref|NP_683734.1| nuclear pore membrane protein 121 [Mus musculus]
gi|21591727|gb|AAM64199.1|AF516680_1 nuclear pore
membrane glycoprotein 121 kD [Mus musculus]
Length = 1199
Score = 38.1 bits (87), Expect = 0.12
Identities = 33/128 (25%), Positives = 50/128 (38%), Gaps = 1/128 (0%)
Frame = -3
Query: 637 PALSPACASLYVTTLKSKPQPSWTRAPGVPSRQ*VNDPKQANTRKLRKSKPVHAPPEHNH 458
P +SP L T+ SKP ++ S + D K + + +S V P
Sbjct: 609 PLVSPLAGPLASTSSDSKPAATFLGLASASSITPLTDSKSSGVSQAEQS--VSTPASTAS 666
Query: 457 SPLPLNLMTFAS*ARTLSTVRLVIHAQRLASARTKP-EPSCTETPGQSKLDAAPQTTTRS 281
SP P M F + S+ L A AS KP P+ ++ S L ++ T +
Sbjct: 667 SPTPKPSMLFGMLSPPASSSSLATPAPACASPMFKPIFPATPKSESDSPLPSSSSAATTA 726
Query: 280 QPGSMPPT 257
+ PPT
Sbjct: 727 SSSTAPPT 734
