KCC000887A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC000887A_C01 KCC000887A_c01
taACGAATGGTGGCTTGATTTTTGTAAAAGGAAAGGGATGCAGTTGCCCGGGGTTCTACT
GGGCGTCGTCGGGAGCTTGGGCAGGGGCGTCTTCGGGCAAAGGCTGCACTATGCCTTTGC
TTGCAGCGCAAAGTCCCAATTGCAGCGGCACGGAGCTGCAGCGCAGTCATGTGGAGTTCT
GTCTCGGTGCTTCTCAGGCGTGCCTGCTCACACGATCGTCGGCATGCCAGCACTATCACC
TACTATGTCTCAAGGGAACATCGCGAAGTGGCACGTGAAGCCGGGACAGGAGGTTTCGCC
GGGCTCGGTCCTCGCGGACATTGAGACGGATAAGGCCACGCTGGCATTTGAAAACCAGGA
CGAGGGCTTTGTTGCAAAGCTTCTTGTGCCCGATGGCGCGCGGGACATTCCGATCGGACA
GCCGGTGCTGGTGCTGGTGGAGGACGCCAGCAGCGTCGCAGCCTTTGCCAACTTCACGCC
GGGGCAGTCCGCACCCGCTGATGCTGCCCCTGCTGCCCCCGTGGAGCAGCCCCCAGCAGC
CACTGCTGCACCTGCGCTGATGGAGCATGCCTACCCGCCCCACACGCGGCTGACAATGCC
TGTCCCTGTCAGCCACCATGGACCGTGGCAATATCGTGGTGTGGAAGGTGTCCCCGGGCT
GCTGCATCAAG


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC000887A_C01 KCC000887A_c01
         (671 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_014328.1| Dihydrolipoamide acetyltransferase component (E...   130  2e-29
ref|NP_609118.1| CG5261-PB [Drosophila melanogaster] gi|7297250|...   129  4e-29
ref|XP_343390.1| dihydrolipoamide acetyltransferase [Rattus norv...   125  6e-28
gb|AAH26680.1| Dihydrolipoamide S-acetyltransferase (E2 componen...   124  2e-27
ref|NP_663589.2| dihydrolipoamide S-acetyltransferase (E2 compon...   124  2e-27

>ref|NP_014328.1| Dihydrolipoamide acetyltransferase component (E2) of pyruvate
           dehydrogenase complex; Lat1p [Saccharomyces cerevisiae]
           gi|129060|sp|P12695|ODP2_YEAST Dihydrolipoamide
           acetyltransferase component of pyruvate dehydrogenase
           complex, mitochondrial precursor (E2) (PDC-E2)
           gi|82982|pir||A30198 dihydrolipoamide
           S-acetyltransferase (EC 2.3.1.12) precursor - yeast
           (Saccharomyces cerevisiae) gi|170972|gb|AAA34385.1|
           dihydrolipoamide acetyltransferase precursor (EC
           2.3.1.12) gi|791115|emb|CAA60189.1| dihydrolipoamide
           S-acetyltransferase [Saccharomyces cerevisiae]
           gi|1301955|emb|CAA95945.1| LAT1 [Saccharomyces
           cerevisiae]
          Length = 482

 Score =  130 bits (327), Expect = 2e-29
 Identities = 64/150 (42%), Positives = 93/150 (61%), Gaps = 10/150 (6%)
 Frame = +2

Query: 137 QLQRHGAAAQSCGVLSRCFSGVPAHTIVGMPALSPTMSQGNIAKWHVKPGQEVSPGSVLA 316
           ++ R     +S  +  RC++  P HTI+GMPALSPTM+QGN+A W  K G ++SPG V+A
Sbjct: 10  RISRSSVLTRSLRLQLRCYASYPEHTIIGMPALSPTMTQGNLAAWTKKEGDQLSPGEVIA 69

Query: 317 DIETDKATLAFENQDEGFVAKLLVPDGARDIPIGQPVLVLVEDASSVAAFANF------- 475
           +IETDKA + FE Q++G++AK+LVP+G +DIP+ +P+ V VED + V AF +F       
Sbjct: 70  EIETDKAQMDFEFQEDGYLAKILVPEGTKDIPVNKPIAVYVEDKADVPAFKDFKLEDSGS 129

Query: 476 ---TPGQSAPADAAPAAPVEQPPAATAAPA 556
              T  ++ PA+       E P   T   A
Sbjct: 130 DSKTSTKAQPAEPQAEKKQEAPAEETKTSA 159

>ref|NP_609118.1| CG5261-PB [Drosophila melanogaster] gi|7297250|gb|AAF52514.1|
           CG5261-PB [Drosophila melanogaster]
          Length = 512

 Score =  129 bits (324), Expect = 4e-29
 Identities = 65/145 (44%), Positives = 90/145 (61%), Gaps = 1/145 (0%)
 Frame = +2

Query: 182 SRCFSGVPAHTIVGMPALSPTMSQGNIAKWHVKPGQEVSPGSVLADIETDKATLAFENQD 361
           +R ++ +P H  V +PALSPTM +G+I  W  K G +++ G +L +IETDKAT+ FE  +
Sbjct: 71  ARAYANLPEHIRVPLPALSPTMERGSIVSWEKKEGDKLNEGDLLCEIETDKATMGFETPE 130

Query: 362 EGFVAKLLVPDGARDIPIGQPVLVLVEDASSVAAFANFTPGQSAPADAAPAA-PVEQPPA 538
           EGF+AK+L+  G +D+P+GQ + ++V D  SVAAFANF    +A A AAPAA P   P A
Sbjct: 131 EGFLAKILIQGGTKDVPVGQLLCIIVPDQGSVAAFANFKDDGAAAAPAAPAAAPAPAPAA 190

Query: 539 ATAAPALMEHAYPPHTRLTMPVPVS 613
           A A P     A  P      P P +
Sbjct: 191 AAAPPPPPPPAAAPAAAAPPPAPAA 215

>ref|XP_343390.1| dihydrolipoamide acetyltransferase [Rattus norvegicus]
          Length = 632

 Score =  125 bits (314), Expect = 6e-28
 Identities = 62/154 (40%), Positives = 93/154 (60%), Gaps = 2/154 (1%)
 Frame = +2

Query: 146 RHGAAAQSCGVLSRCFSGVPAHTIVGMPALSPTMSQGNIAKWHVKPGQEVSPGSVLADIE 325
           R+    Q  G  SR    +P H  V +P+LSPTM  G IA+W  K G+++S G ++A++E
Sbjct: 61  RNRILQQLLGSPSRRSYSLPPHQKVPLPSLSPTMQAGTIARWEKKEGEKISEGDLIAEVE 120

Query: 326 TDKATLAFENQDEGFVAKLLVPDGARDIPIGQPVLVLVEDASSVAAFANFTPGQSAPADA 505
           TDKAT+ FE+ +E ++AK+LVP+G RD+P+G  + + VE    + AF N+T   +  A  
Sbjct: 121 TDKATVGFESLEECYMAKILVPEGTRDVPVGSIICITVEKPQDIEAFKNYTLDSATAATQ 180

Query: 506 APAAPVEQPPAATAAPALME--HAYPPHTRLTMP 601
           A  AP   P AA AAP+      +YP H ++ +P
Sbjct: 181 AAPAPAAAPAAAPAAPSASAPGSSYPVHMQIVLP 214

 Score =  123 bits (309), Expect = 2e-27
 Identities = 60/141 (42%), Positives = 88/141 (61%)
 Frame = +2

Query: 155 AAAQSCGVLSRCFSGVPAHTIVGMPALSPTMSQGNIAKWHVKPGQEVSPGSVLADIETDK 334
           AAA +    S   S  P H  + +PALSPTM+ G + +W  K G+++S G +LA+IETDK
Sbjct: 190 AAAPAAPSASAPGSSYPVHMQIVLPALSPTMTMGTVQRWEKKVGEKLSEGDLLAEIETDK 249

Query: 335 ATLAFENQDEGFVAKLLVPDGARDIPIGQPVLVLVEDASSVAAFANFTPGQSAPADAAPA 514
           AT+ FE Q+EG++AK+LVP+G RD+P+G P+ ++VE    +AAFA++ P  +      P 
Sbjct: 250 ATIGFEVQEEGYLAKILVPEGTRDVPLGTPLCIIVEKQEDIAAFADYRP--TEVTSLKPQ 307

Query: 515 APVEQPPAATAAPALMEHAYP 577
           AP   PP   A P + +   P
Sbjct: 308 APPPVPPPVAAVPPIPQPLAP 328

>gb|AAH26680.1| Dihydrolipoamide S-acetyltransferase (E2 component of pyruvate
           dehydrogenase complex) [Mus musculus]
          Length = 642

 Score =  124 bits (310), Expect = 2e-27
 Identities = 62/135 (45%), Positives = 88/135 (64%), Gaps = 2/135 (1%)
 Frame = +2

Query: 155 AAAQSCGVLSRCFSGVPAHTIVGMPALSPTMSQGNIAKWHVKPGQEVSPGSVLADIETDK 334
           AAA +    S   S  P H  + +PALSPTM+ G + +W  K G+++S G +LA+IETDK
Sbjct: 199 AAAPAAPSASAPGSSYPTHMQIVLPALSPTMTMGTVQRWEKKVGEKLSEGDLLAEIETDK 258

Query: 335 ATLAFENQDEGFVAKLLVPDGARDIPIGQPVLVLVEDASSVAAFANFTPGQ--SAPADAA 508
           AT+ FE Q+EG++AK+LVP+G RD+P+G P+ ++VE    +AAFA++ P +  S    AA
Sbjct: 259 ATIGFEVQEEGYLAKILVPEGTRDVPLGAPLCIIVEKQEDIAAFADYRPTEVTSLKPQAA 318

Query: 509 PAAPVEQPPAATAAP 553
           P AP   PP A   P
Sbjct: 319 PPAP---PPVAAVPP 330

 Score =  122 bits (307), Expect = 4e-27
 Identities = 66/163 (40%), Positives = 98/163 (59%), Gaps = 4/163 (2%)
 Frame = +2

Query: 125 SAKSQLQRHGAAAQSCGVLSRCFSGVPAHTIVGMPALSPTMSQGNIAKWHVKPGQEVSPG 304
           S    + R+    Q  G  SR    +P H  V +P+LSPTM  G IA+W  K G+++S G
Sbjct: 62  SGSGTVPRNRLLRQLLGSPSRRSYSLPPHQKVPLPSLSPTMQAGTIARWEKKEGEKISEG 121

Query: 305 SVLADIETDKATLAFENQDEGFVAKLLVPDGARDIPIGQPVLVLVEDASSVAAFANFTPG 484
            ++A++ETDKAT+ FE+ +E ++AK+LVP+G RD+P+G  + + VE    + AF N+T  
Sbjct: 122 DLIAEVETDKATVGFESLEECYMAKILVPEGTRDVPVGSIICITVEKPQDIEAFKNYTLD 181

Query: 485 QSAPA--DAAPAAPVEQPPAATAAPALME--HAYPPHTRLTMP 601
            +A A   AAPAA    P AA AAP+      +YP H ++ +P
Sbjct: 182 LAAAAAPQAAPAA-APAPAAAPAAPSASAPGSSYPTHMQIVLP 223

>ref|NP_663589.2| dihydrolipoamide S-acetyltransferase (E2 component of pyruvate
           dehydrogenase complex); dihydrolipoamide
           S-acetyltransferase precursor [Mus musculus]
           gi|26327949|dbj|BAC27715.1| unnamed protein product [Mus
           musculus]
          Length = 642

 Score =  124 bits (310), Expect = 2e-27
 Identities = 62/135 (45%), Positives = 88/135 (64%), Gaps = 2/135 (1%)
 Frame = +2

Query: 155 AAAQSCGVLSRCFSGVPAHTIVGMPALSPTMSQGNIAKWHVKPGQEVSPGSVLADIETDK 334
           AAA +    S   S  P H  + +PALSPTM+ G + +W  K G+++S G +LA+IETDK
Sbjct: 199 AAAPAAPSASAPGSSYPTHMQIVLPALSPTMTMGTVQRWEKKVGEKLSEGDLLAEIETDK 258

Query: 335 ATLAFENQDEGFVAKLLVPDGARDIPIGQPVLVLVEDASSVAAFANFTPGQ--SAPADAA 508
           AT+ FE Q+EG++AK+LVP+G RD+P+G P+ ++VE    +AAFA++ P +  S    AA
Sbjct: 259 ATIGFEVQEEGYLAKILVPEGTRDVPLGAPLCIIVEKQEDIAAFADYRPTEVTSLKPQAA 318

Query: 509 PAAPVEQPPAATAAP 553
           P AP   PP A   P
Sbjct: 319 PPAP---PPVAAVPP 330

 Score =  121 bits (304), Expect = 8e-27
 Identities = 64/164 (39%), Positives = 94/164 (57%), Gaps = 5/164 (3%)
 Frame = +2

Query: 125 SAKSQLQRHGAAAQSCGVLSRCFSGVPAHTIVGMPALSPTMSQGNIAKWHVKPGQEVSPG 304
           S    + R+    Q  G  SR    +P H  V +P+LSPTM  G IA+W  K G+++S G
Sbjct: 62  SGSGTVPRNRLLRQLLGSPSRRSYSLPPHQKVPLPSLSPTMQAGTIARWEKKEGEKISEG 121

Query: 305 SVLADIETDKATLAFENQDEGFVAKLLVPDGARDIPIGQPVLVLVEDASSVAAFANFTPG 484
            ++A++ETDKAT+ FE+ +E ++AK+LVP+G RD+P+G  + + VE    + AF N+T  
Sbjct: 122 DLIAEVETDKATVGFESLEECYMAKILVPEGTRDVPVGSIICITVEKPQDIEAFKNYT-- 179

Query: 485 QSAPADAAPAAPVEQPPAATAAPALME-----HAYPPHTRLTMP 601
               A AAP A     PA  AAPA         +YP H ++ +P
Sbjct: 180 LDLAAAAAPQAAPAAAPATAAAPAAPSASAPGSSYPTHMQIVLP 223



EST assemble image


clone accession position
1 LC041c06_r AV621811 1 511
2 HCL059d06_r AV642859 3 490
3 CM001c11_r AV386509 4 561
4 MX243e01_r BP091737 437 671




Chlamydomonas reinhardtii
Kazusa DNA Research Institute