KCC000885A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC000885A_C01 KCC000885A_c01
gcacgaggccatggccacctgcgtgaaccagtgggctgtggtcatgagcaagacgacCGG
CATCATCGACCAGGTGGTGGAGGTGGACTTCCAGTACCCGTCGGAGGGCATTCACAAGCG
CTGGGACGCGGGCTACCGCATCACCTGCGCCGCGTCCACGCACGACCAGTCGGCGTTCGT
GCTGTCCAACCTGCGCAAGCCCAACCTGGACGAGACGCAGGAGACGCTGCGCACCAGCAG
CTTCCCCACGCAGCACATCAAGGAGAAGTGGGACGACAACCTGTTCCTGGCGGCGATCTG
CTACGGCAAGACCGTCAGCTAAGGAGCGGCAGCCAACGCACGGGCGGACTGGCGCGCGCG
AACCGGTGGCTAGTGCGGCTGGCGTGGCCTGGTGTGGCATTCGGGCTTCGCATCTGTAGC
GCCGATCGACATTCAAGGCGCGGAGTATGGCAGCCAGGTGCCCCTCAGCAGGTCAGCAGC
CATCCTGGCGTGCGGCTCCCCCAAGTCTCGGGGCTGGTTAGTGTCAGTTGCAGCGGGTAG
GCGGCAATTCCGCAGTTTTGCTGTGTGCTGCACGGTCGGCCCCGCTTGCTGTCGGGGCAC


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC000885A_C01 KCC000885A_c01
         (600 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

gb|AAL60199.1|AF443205_1 serine/threonine protein kinase [Chlamy...   217  9e-56
gb|AAP80674.1| casein kinase-like protein [Triticum aestivum]         147  1e-34
gb|AAO37965.1| putative serine/threonine protein kinase [Oryza s...   145  6e-34
dbj|BAC83610.1| putative casein kinase 1, delta isoform 1 [Oryza...   142  4e-33
dbj|BAB89852.1| putative casein kinase [Oryza sativa (japonica c...   142  5e-33

>gb|AAL60199.1|AF443205_1 serine/threonine protein kinase [Chlamydomonas reinhardtii]
          Length = 699

 Score =  217 bits (553), Expect = 9e-56
 Identities = 104/104 (100%), Positives = 104/104 (100%)
 Frame = +2

Query: 8   AMATCVNQWAVVMSKTTGIIDQVVEVDFQYPSEGIHKRWDAGYRITCAASTHDQSAFVLS 187
           AMATCVNQWAVVMSKTTGIIDQVVEVDFQYPSEGIHKRWDAGYRITCAASTHDQSAFVLS
Sbjct: 596 AMATCVNQWAVVMSKTTGIIDQVVEVDFQYPSEGIHKRWDAGYRITCAASTHDQSAFVLS 655

Query: 188 NLRKPNLDETQETLRTSSFPTQHIKEKWDDNLFLAAICYGKTVS 319
           NLRKPNLDETQETLRTSSFPTQHIKEKWDDNLFLAAICYGKTVS
Sbjct: 656 NLRKPNLDETQETLRTSSFPTQHIKEKWDDNLFLAAICYGKTVS 699

 Score = 55.1 bits (131), Expect = 8e-07
 Identities = 29/98 (29%), Positives = 51/98 (51%), Gaps = 2/98 (2%)
 Frame = +2

Query: 11  MATCVNQWAVVMSKTTGIIDQVVEVDFQ--YPSEGIHKRWDAGYRITCAASTHDQSAFVL 184
           +++C N WA+VM   T    Q+ +V +    P E I ++W+ GY IT  + + + S+ V+
Sbjct: 502 VSSCQNLWAIVMDAGTDYTQQIYKVHYNSFLPKEWIMEKWEEGYYITAVSGSDNNSSLVV 561

Query: 185 SNLRKPNLDETQETLRTSSFPTQHIKEKWDDNLFLAAI 298
             + K      Q      SFP + IK+KW +  ++ A+
Sbjct: 562 --MSKGTRFTQQSYKVADSFPFEWIKKKWREGFYVTAM 597

 Score = 33.9 bits (76), Expect = 1.8
 Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
 Frame = +2

Query: 110 IHKRWDAGYRITCAASTHDQSAFVLSNLRKPNLDETQETLR---TSSFPTQHIKEKWDDN 280
           + K W+ G  I+C +S  +  A V+        D TQ+  +    S  P + I EKW++ 
Sbjct: 489 VQKGWEDGLYISCVSSCQNLWAIVMD----AGTDYTQQIYKVHYNSFLPKEWIMEKWEEG 544

Query: 281 LFLAAI 298
            ++ A+
Sbjct: 545 YYITAV 550

>gb|AAP80674.1| casein kinase-like protein [Triticum aestivum]
          Length = 114

 Score =  147 bits (370), Expect = 1e-34
 Identities = 68/104 (65%), Positives = 84/104 (80%)
 Frame = +2

Query: 8   AMATCVNQWAVVMSKTTGIIDQVVEVDFQYPSEGIHKRWDAGYRITCAASTHDQSAFVLS 187
           +MAT  ++WAVVMS+  G  DQVVE+DF YPSEGIH+RWD GYRIT  A+T DQ+AF+LS
Sbjct: 11  SMATAGSRWAVVMSRNAGFSDQVVELDFLYPSEGIHQRWDNGYRITATAATLDQAAFILS 70

Query: 188 NLRKPNLDETQETLRTSSFPTQHIKEKWDDNLFLAAICYGKTVS 319
             R+   DETQETLRTS+FP+QH+KEKW  NL+LA+ICYG+  S
Sbjct: 71  IPRRKPNDETQETLRTSAFPSQHVKEKWSKNLYLASICYGRAAS 114

>gb|AAO37965.1| putative serine/threonine protein kinase [Oryza sativa (japonica
           cultivar-group)]
          Length = 707

 Score =  145 bits (365), Expect = 6e-34
 Identities = 65/103 (63%), Positives = 83/103 (80%)
 Frame = +2

Query: 8   AMATCVNQWAVVMSKTTGIIDQVVEVDFQYPSEGIHKRWDAGYRITCAASTHDQSAFVLS 187
           +MAT  N+W VVMS+  G   QVVE+DF YPSEGIH+RW+ GYRIT  A+T DQ+AF+LS
Sbjct: 604 SMATAGNRWGVVMSRNAGYSHQVVELDFLYPSEGIHRRWETGYRITSTAATPDQAAFILS 663

Query: 188 NLRKPNLDETQETLRTSSFPTQHIKEKWDDNLFLAAICYGKTV 316
             ++  +DETQETLRTSSFP+ H+KEKW  NL++A+ICYG+TV
Sbjct: 664 IPKRKPMDETQETLRTSSFPSNHVKEKWSKNLYIASICYGRTV 706

>dbj|BAC83610.1| putative casein kinase 1, delta isoform 1 [Oryza sativa (japonica
           cultivar-group)]
          Length = 699

 Score =  142 bits (358), Expect = 4e-33
 Identities = 62/103 (60%), Positives = 86/103 (83%)
 Frame = +2

Query: 8   AMATCVNQWAVVMSKTTGIIDQVVEVDFQYPSEGIHKRWDAGYRITCAASTHDQSAFVLS 187
           +MAT  N+W VVMS+ +G  +QVVE+DF YPSEGIH+RW+ GYRIT  A+T+DQ+AF+LS
Sbjct: 596 SMATAGNRWGVVMSRNSGYSEQVVELDFLYPSEGIHRRWETGYRITSIAATNDQAAFILS 655

Query: 188 NLRKPNLDETQETLRTSSFPTQHIKEKWDDNLFLAAICYGKTV 316
             ++  +DETQETLRTS+FP+ H+K+KW  NL++A+IC+G+TV
Sbjct: 656 IPKRKPVDETQETLRTSAFPSNHVKDKWAKNLYIASICFGRTV 698

>dbj|BAB89852.1| putative casein kinase [Oryza sativa (japonica cultivar-group)]
          Length = 698

 Score =  142 bits (357), Expect = 5e-33
 Identities = 63/104 (60%), Positives = 85/104 (81%)
 Frame = +2

Query: 8   AMATCVNQWAVVMSKTTGIIDQVVEVDFQYPSEGIHKRWDAGYRITCAASTHDQSAFVLS 187
           +M T  ++W VVMS+ +G  +QVVE+DF YPSEGIH+RW+ GYRIT  A+T DQ+AF+LS
Sbjct: 595 SMTTAGSRWGVVMSRNSGFSEQVVELDFLYPSEGIHRRWENGYRITSTAATGDQAAFILS 654

Query: 188 NLRKPNLDETQETLRTSSFPTQHIKEKWDDNLFLAAICYGKTVS 319
             ++  +DETQETLRTS+FP+ H+KEKW  NL++A+ICYG+TVS
Sbjct: 655 IPKRKLMDETQETLRTSAFPSNHVKEKWAKNLYIASICYGRTVS 698



EST assemble image


clone accession position
1 CM001c08_r AV386466 1 534
2 LC001b01_r AV618901 58 600




Chlamydomonas reinhardtii
Kazusa DNA Research Institute