Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC000869A_C01 KCC000869A_c01
(494 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
prf||1909359A ribosomal protein S19 202 2e-51
ref|NP_187143.1| 40S ribosomal protein S24 (RPS24A) [Arabidopsis... 197 5e-50
dbj|BAB84441.1| putative 40S ribosomal protein S24 [Oryza sativa... 194 5e-49
gb|AAM63791.1| 40S ribosomal protein S19-like [Arabidopsis thali... 192 2e-48
ref|NP_198158.1| 40S ribosomal protein S24 (RPS24B) [Arabidopsis... 191 3e-48
>prf||1909359A ribosomal protein S19
Length = 133
Score = 202 bits (513), Expect = 2e-51
Identities = 101/132 (76%), Positives = 114/132 (85%), Gaps = 1/132 (0%)
Frame = +1
Query: 4 MSDKTCTIRTRKFMTNRLLQRRQFIIDVLHPGRANVSKSELAEKLSSMYEVKDSQCIFLF 183
M+DK TIRTRKFMTNRLL R+QFIIDVLHPGRANVSK+EL EKL+ MYEVKD+ IF+F
Sbjct: 1 MADKAVTIRTRKFMTNRLLARKQFIIDVLHPGRANVSKAELKEKLARMYEVKDTNAIFVF 60
Query: 184 GFRTQFGGGKSTGFGLIYDDLKAAKQFEPKYRLVRNGLEKKVEKSRKQMKERRKRAKKVR 363
FRT FGGGKSTGFGLIYD ++ AK++EPKYRL+RNGL+ KVEKSRKQMKER+ RAKKVR
Sbjct: 61 KFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLDTKVEKSRKQMKERKNRAKKVR 120
Query: 364 GAKK-NAGAGKK 396
G KK AG KK
Sbjct: 121 GVKKIKAGDAKK 132
>ref|NP_187143.1| 40S ribosomal protein S24 (RPS24A) [Arabidopsis thaliana]
gi|11134742|sp|Q9SS17|RS24_ARATH 40S ribosomal protein
S24 gi|12322851|gb|AAG51413.1|AC009465_13 putative
ribosomal protein s19 or s24; 43956-42880 [Arabidopsis
thaliana] gi|15215672|gb|AAK91381.1| AT3g04920/T9J14_13
[Arabidopsis thaliana] gi|17065190|gb|AAL32749.1|
putative ribosomal protein [Arabidopsis thaliana]
gi|20259968|gb|AAM13331.1| putative ribosomal protein
s19 or s24 [Arabidopsis thaliana]
gi|20334888|gb|AAM16200.1| AT3g04920/T9J14_13
[Arabidopsis thaliana] gi|21554374|gb|AAM63481.1|
putative ribosomal protein s19 or s24 [Arabidopsis
thaliana]
Length = 133
Score = 197 bits (502), Expect = 5e-50
Identities = 96/132 (72%), Positives = 114/132 (85%), Gaps = 1/132 (0%)
Frame = +1
Query: 4 MSDKTCTIRTRKFMTNRLLQRRQFIIDVLHPGRANVSKSELAEKLSSMYEVKDSQCIFLF 183
M++K TIRTRKFMTNRLL R+QF+IDVLHPGRANVSK+EL EKL+ MYEVKD IF+F
Sbjct: 1 MAEKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYEVKDPNAIFVF 60
Query: 184 GFRTQFGGGKSTGFGLIYDDLKAAKQFEPKYRLVRNGLEKKVEKSRKQMKERRKRAKKVR 363
FRT FGGGKS+GFGLIYD +++AK+FEPKYRL+RNGL+ K+EKSRKQ+KER+ RAKK+R
Sbjct: 61 KFRTHFGGGKSSGFGLIYDTVESAKKFEPKYRLIRNGLDTKIEKSRKQIKERKNRAKKIR 120
Query: 364 GAKK-NAGAGKK 396
G KK AG KK
Sbjct: 121 GVKKTKAGDAKK 132
>dbj|BAB84441.1| putative 40S ribosomal protein S24 [Oryza sativa (japonica
cultivar-group)] gi|20160546|dbj|BAB89495.1| putative
40S ribosomal protein S24 [Oryza sativa (japonica
cultivar-group)]
Length = 138
Score = 194 bits (493), Expect = 5e-49
Identities = 93/127 (73%), Positives = 110/127 (86%), Gaps = 2/127 (1%)
Frame = +1
Query: 22 TIRTRKFMTNRLLQRRQFIIDVLHPGRANVSKSELAEKLSSMYEVKDSQCIFLFGFRTQF 201
T+RTRKFMTNRLL R+QF+++V+HPGR NVSK+EL EKL+ +YEVKD+ CIF+F FRT F
Sbjct: 11 TLRTRKFMTNRLLSRKQFVLEVIHPGRPNVSKAELKEKLAKLYEVKDANCIFVFKFRTHF 70
Query: 202 GGGKSTGFGLIYDDLKAAKQFEPKYRLVRNGLEKKVEKSRKQMKERRKRAKKVRGAKKN- 378
GGGKSTGFGLIYD+L AAK++EPKYRL+RNGL KVEKSRKQMKER+ RAKK+RG KK
Sbjct: 71 GGGKSTGFGLIYDNLDAAKKYEPKYRLIRNGLATKVEKSRKQMKERKNRAKKIRGVKKTK 130
Query: 379 -AGAGKK 396
AGKK
Sbjct: 131 AGDAGKK 137
>gb|AAM63791.1| 40S ribosomal protein S19-like [Arabidopsis thaliana]
Length = 133
Score = 192 bits (488), Expect = 2e-48
Identities = 94/132 (71%), Positives = 111/132 (83%), Gaps = 1/132 (0%)
Frame = +1
Query: 4 MSDKTCTIRTRKFMTNRLLQRRQFIIDVLHPGRANVSKSELAEKLSSMYEVKDSQCIFLF 183
M++K TIRTR FMTNRLL R+QF+IDVLHPGRANVSK+EL EKL+ MYEVKD IF F
Sbjct: 1 MAEKAVTIRTRNFMTNRLLARKQFVIDVLHPGRANVSKAELKEKLARMYEVKDPNAIFCF 60
Query: 184 GFRTQFGGGKSTGFGLIYDDLKAAKQFEPKYRLVRNGLEKKVEKSRKQMKERRKRAKKVR 363
FRT FGGGKS+G+GLIYD ++ AK+FEPKYRL+RNGL+ K+EKSRKQ+KER+ RAKK+R
Sbjct: 61 KFRTHFGGGKSSGYGLIYDTVENAKKFEPKYRLIRNGLDTKIEKSRKQIKERKNRAKKIR 120
Query: 364 GAKK-NAGAGKK 396
G KK AG KK
Sbjct: 121 GVKKTKAGDAKK 132
>ref|NP_198158.1| 40S ribosomal protein S24 (RPS24B) [Arabidopsis thaliana]
gi|14423510|gb|AAK62437.1|AF386992_1 Unknown protein
[Arabidopsis thaliana] gi|18377454|gb|AAL66893.1|
unknown protein [Arabidopsis thaliana]
Length = 133
Score = 191 bits (486), Expect = 3e-48
Identities = 94/132 (71%), Positives = 111/132 (83%), Gaps = 1/132 (0%)
Frame = +1
Query: 4 MSDKTCTIRTRKFMTNRLLQRRQFIIDVLHPGRANVSKSELAEKLSSMYEVKDSQCIFLF 183
M++K TIRTR FMTNRLL R+QF+IDVLHPGRANVSK+EL EKL+ MYEVKD IF F
Sbjct: 1 MAEKAVTIRTRNFMTNRLLARKQFVIDVLHPGRANVSKAELKEKLARMYEVKDPNAIFCF 60
Query: 184 GFRTQFGGGKSTGFGLIYDDLKAAKQFEPKYRLVRNGLEKKVEKSRKQMKERRKRAKKVR 363
FRT FGGGKS+G+GLIYD ++ AK+FEPKYRL+RNGL+ K+EKSRKQ+KER+ RAKK+R
Sbjct: 61 KFRTHFGGGKSSGYGLIYDTVENAKKFEPKYRLIRNGLDTKIEKSRKQIKERKNRAKKIR 120
Query: 364 GAKK-NAGAGKK 396
G KK AG KK
Sbjct: 121 GVKKTKAGDTKK 132
