Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC000856A_C01 KCC000856A_c01
(694 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_902121.1| hypothetical protein CV2451 [Chromobacterium vi... 62 1e-08
gb|AAN63644.1|AF440828_7 unknown [Streptomyces avermitilis] 59 5e-08
emb|CAB65666.1| glycoprotein G-2 [Human herpesvirus 2] gi|668835... 58 1e-07
emb|CAC27580.1| keratin associated protein 4.9 [Homo sapiens] 57 3e-07
ref|NP_823727.1| putative translation initiation factor IF-2 [St... 56 5e-07
>ref|NP_902121.1| hypothetical protein CV2451 [Chromobacterium violaceum ATCC 12472]
gi|34103761|gb|AAQ60122.1| hypothetical protein CV2451
[Chromobacterium violaceum ATCC 12472]
Length = 247
Score = 61.6 bits (148), Expect = 1e-08
Identities = 66/212 (31%), Positives = 75/212 (35%), Gaps = 24/212 (11%)
Frame = -1
Query: 688 RASCRTGCRRRSPTRTAPCPSAPRPAAACSPAGSQSRGSAAPSH-VRPWACPRCRTPPPP 512
R CRTG R P A P++P A P R P +R R PP P
Sbjct: 25 RRGCRTGLRT-GPASPASAPASPSSPNAADPTCRLWRWCRLPGRRIRSICRRRPSQPPGP 83
Query: 511 TWRGPAR--R*ARATCPTWVAAP---------GGSRC---GCWWRAAAGCARRAAAGVLR 374
R P R R R C A GSR GCW R ARR +
Sbjct: 84 RNRSPCRTARSRRWRCRRRAGAARALPRRRSGAGSRPAAPGCWPRTDCSRARRRSRRSAA 143
Query: 373 WCNRARSPGCASAGTGSGSAR---CAGS------RADRWTGSPASAPTTRPRSRPHPPLR 221
C RAR C +A SG R C+G+ D WT SPA P +R R H
Sbjct: 144 GCRRARPDSCRTACPRSGRCRRNSCSGTPDASHGGRDGWTASPAPGPASRSCRRRHYGCT 203
Query: 220 S*VPTAPRGPSRWGWTRTTAARTCTGPGSPAA 125
+ APR T GP PAA
Sbjct: 204 A----APRNEK----TMRRRTSPAAGPARPAA 227
Score = 48.1 bits (113), Expect = 1e-04
Identities = 48/154 (31%), Positives = 58/154 (37%), Gaps = 4/154 (2%)
Frame = +2
Query: 221 SQRRMRTASRSSGGSRCWAACPPVCSTTCAASRPRTCAS*CATWTPRPITPT*YTSCCAA 400
S+R RT R+ S A P S P C W + S C
Sbjct: 24 SRRGCRTGLRTGPASPASAPASP--------SSPNAADPTCRLWRWCRLPGRRIRSICRR 75
Query: 401 RTACCCAPPTSAPAAAWRCYPRRTCRARSSSSRTAPCRRR----RGTAPRACPWTHVTRR 568
R + P +P R R CR R+ ++R P RR R AP P T +R
Sbjct: 76 RPSQPPGPRNRSPCRTARSR-RWRCRRRAGAARALPRRRSGAGSRPAAPGCWPRTDCSRA 134
Query: 569 RRST*LRSSWRTRCCWTRCRRARRGSCRTAPPTS 670
RR R+R CRRAR SCRTA P S
Sbjct: 135 RR--------RSRRSAAGCRRARPDSCRTACPRS 160
Score = 41.6 bits (96), Expect = 0.012
Identities = 53/183 (28%), Positives = 63/183 (33%), Gaps = 20/183 (10%)
Frame = +2
Query: 125 CRWTSRPCTSTGCGRSCPSPSRRTTRCCRYSRSQR----------RMRTASRSSGGSRCW 274
CR R S R P R CR +RS+R R RS GSR
Sbjct: 62 CRLPGRRIRSICRRRPSQPPGPRNRSPCRTARSRRWRCRRRAGAARALPRRRSGAGSRPA 121
Query: 275 A-ACPPVCSTTCAASRPRTCAS*CATWTPRPITPT*YTSCCAARTACCCAPPTS-APAAA 448
A C P + A R R A+ C P S R +C P S
Sbjct: 122 APGCWPRTDCSRARRRSRRSAAGCRRARPDSCRTACPRSGRCRRNSCSGTPDASHGGRDG 181
Query: 449 WRCYP-----RRTCRARSSSSRTAPCRR---RRGTAPRACPWTHVTRRRRST*LRSSWRT 604
W P R+CR R AP RR T+P A P RR+ + RS+ T
Sbjct: 182 WTASPAPGPASRSCRRRHYGCTAAPRNEKTMRRRTSPAAGPARPAARRKET---RSARNT 238
Query: 605 RCC 613
R C
Sbjct: 239 RNC 241
>gb|AAN63644.1|AF440828_7 unknown [Streptomyces avermitilis]
Length = 291
Score = 59.3 bits (142), Expect = 5e-08
Identities = 52/153 (33%), Positives = 66/153 (42%), Gaps = 7/153 (4%)
Frame = -1
Query: 676 RTGCR--RRSPTRTAPCPSAPRPAAACSPAGSQSRGSAAPSHVRPWACPRCRTPPPPTWR 503
RTG R R + PC S+ A ACS + +S S+ P P +C R PP+ R
Sbjct: 131 RTGIRSTRTGSSIRPPCRSSETTAGACSTSRIRS-ASSPPRRRMPGSCCAARRSGPPSCR 189
Query: 502 GPARR*ARATC--PTWVAAPGGSRCGCWWRAAAGCARRAAAGVLRWCNRARSPGCASAGT 329
GP+R A + C W A GG CW AA C+ RW R RS GC G
Sbjct: 190 GPSRH-APSGCWRRRWRTATGG---WCWAPGAAECSGTTPR---RW--RGRSTGCWVPGA 240
Query: 328 GS---GSARCAGSRADRWTGSPASAPTTRPRSR 239
GS S C+ S R P + + R +R
Sbjct: 241 GSPGTSSTSCSASSTGRRGRRPEAPSSVRSMAR 273
>emb|CAB65666.1| glycoprotein G-2 [Human herpesvirus 2] gi|6688353|emb|CAB65667.1|
glycoprotein G-2 [Human herpesvirus 2]
gi|6688355|emb|CAB65668.1| glycoprotein G-2 [Human
herpesvirus 2]
Length = 356
Score = 58.2 bits (139), Expect = 1e-07
Identities = 59/212 (27%), Positives = 76/212 (35%), Gaps = 10/212 (4%)
Frame = -1
Query: 655 SPTRTAPCPSAPRPAAACSPAGSQSRGSAAPSHVRPWACPRCRTPPP--------PTWRG 500
SP TA S+P PAAA +P + S+AP+ P P TPPP PT G
Sbjct: 69 SPPATASVESSPLPAAAATPGAGHTNTSSAPAAKTPPTTPAPTTPPPTSTHATPRPTTPG 128
Query: 499 PARR*ARATCPTWVAAPGGSRCGCWWRAAAGCARRAAAGVLRWCNRARSPGCASAGTGSG 320
P T P A PG A A A + + SP + G +
Sbjct: 129 P------QTTPPGPATPG--------PVGASAAPTADSPL------TASPPATAPGPSAA 168
Query: 319 SARCAGSRADRWTGSPASAPTTRPRSRPHPPLRS--*VPTAPRGPSRWGWTRTTAARTCT 146
+ A + A T A P T P++ PH P + P P R G A
Sbjct: 169 NVSVAATTATPGTRGTARTPPTDPKTHPHGPADAPPGSPAPPPPEHRGGPEEFEGAGDGE 228
Query: 145 GPGSPAAAVPLLHRSSPLSTGTPAAAAGARPT 50
P +A L R+ + PA RPT
Sbjct: 229 PPDDDDSATGLAFRTPNPNKPPPARPGPIRPT 260
>emb|CAC27580.1| keratin associated protein 4.9 [Homo sapiens]
Length = 191
Score = 56.6 bits (135), Expect = 3e-07
Identities = 62/201 (30%), Positives = 74/201 (35%), Gaps = 13/201 (6%)
Frame = +2
Query: 62 TCCSSRCTCT*RRRTMQKRHSCRWTS--RP--CTSTGCGRSCPSPSRRTTRCCRYSRSQR 229
TCC C T RT R SC +S RP C S C +C PS T CCR + R
Sbjct: 4 TCCRPSCCETTCCRTTCCRPSCCVSSCCRPQCCQSVCCQPTCSRPSCCQTTCCR-TTCYR 62
Query: 230 RMRTASRSSGGSRCWAAC-------PPVCSTTCAASRPRTCAS*CATWTPRPITPT*YTS 388
S C C P C TTC PR C S C RP +S
Sbjct: 63 PSCCVSSCCRPQCCQPVCCQPTCCRPSCCETTCC--HPRCCISSCC----RPSCCV--SS 114
Query: 389 CCAAR--TACCCAPPTSAPAAAWRCYPRRTCRARSSSSRTAPCRRRRGTAPRACPWTHVT 562
CC + + CC P P+ + R +C SS PC R R H T
Sbjct: 115 CCKPQCCQSVCCQPNCCRPSCSISSCCRPSC---CESSCCRPCCCVRPVCGRVS--CHTT 169
Query: 563 RRRRST*LRSSWRTRCCWTRC 625
R + + S R CC + C
Sbjct: 170 CYRPTCVISSCPRPLCCASSC 190
Score = 41.2 bits (95), Expect = 0.015
Identities = 52/177 (29%), Positives = 65/177 (36%), Gaps = 6/177 (3%)
Frame = +2
Query: 161 CGRSCPSPSRRTTRCCRYSRSQRRMRTASRSSGGSRCWAAC--PPVCSTTC---AASRPR 325
C +C PS T CCR T R S C ++C P C + C SRP
Sbjct: 1 CQETCCRPSCCETTCCR--------TTCCRP---SCCVSSCCRPQCCQSVCCQPTCSRPS 49
Query: 326 TC-AS*CATWTPRPITPT*YTSCCAARTACCCAPPTSAPAAAWRCYPRRTCRARSSSSRT 502
C + C T RP SCC + CC P P C P TC R S T
Sbjct: 50 CCQTTCCRTTCYRP-------SCC---VSSCCRPQCCQPVC---CQP--TC-CRPSCCET 93
Query: 503 APCRRRRGTAPRACPWTHVTRRRRST*LRSSWRTRCCWTRCRRARRGSCRTAPPTSS 673
C PR C + R S + S + +CC + C + CR + SS
Sbjct: 94 TCCH------PRCCISSCC---RPSCCVSSCCKPQCCQSVC--CQPNCCRPSCSISS 139
>ref|NP_823727.1| putative translation initiation factor IF-2 [Streptomyces
avermitilis MA-4680] gi|29606199|dbj|BAC70262.1|
putative translation initiation factor IF-2
[Streptomyces avermitilis MA-4680]
Length = 1046
Score = 56.2 bits (134), Expect = 5e-07
Identities = 68/226 (30%), Positives = 82/226 (36%), Gaps = 18/226 (7%)
Frame = -1
Query: 640 APCPSAPRPAAACSPAGSQSRGSAAPSHVRPWACPRCRTPPPPTWRGPARR*ARATCPTW 461
AP P AP+PAAA PA ++ R +AAP+ P P+ P P PA A P+
Sbjct: 81 APRPPAPKPAAAERPAAAE-RPAAAPAAPGPRPGPKPAPRPAPAAPAPAAPEFTAP-PSA 138
Query: 460 VAAPGGSRCGCWWRAAAGCARRAAAGVLRWCNRARSPGCASAGTGSGSARCAGSRADRWT 281
AAP + G A G + A R +PG G G G R DR
Sbjct: 139 PAAPAAAASGPRPGARPGAPKPGGA-------RPATPGQGQGGQVRGERTDRGDRGDRGD 191
Query: 280 GSPASAP---TTRPRSRPHPPLRS*VPTAPRGPSRWGWTRTTAARTCTGPGSPAAAVPLL 110
A+ P RP +RP P P G + G R A R P A P
Sbjct: 192 RQGAARPGGQAPRPGARPAGPRPGNNPFTSGGST--GMARPQAPRPGGAPRPGGAGAPGG 249
Query: 109 HR--------SSPLSTGTPAAA-------AGARPTTAGRALPVCVR 17
R +P G P A GARPT G P R
Sbjct: 250 PRPQGAGGQDRAPRPQGGPGGAPRPQGGPGGARPTPGGMPRPQAPR 295
