Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC000842A_C01 KCC000842A_c01
(579 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_297957.1| hypothetical protein XP_297957 [Homo sapiens] 41 0.010
ref|ZP_00054940.1| COG2208: Serine phosphatase RsbU, regulator o... 37 0.20
ref|NP_625832.1| putative nicotinate-nucleotide-dimethylbenzimid... 37 0.26
ref|ZP_00052774.1| COG2352: Phosphoenolpyruvate carboxylase [Mag... 37 0.26
dbj|BAC84821.1| hypothetical protein [Oryza sativa (japonica cul... 36 0.44
>ref|XP_297957.1| hypothetical protein XP_297957 [Homo sapiens]
Length = 335
Score = 41.2 bits (95), Expect = 0.010
Identities = 47/180 (26%), Positives = 63/180 (34%), Gaps = 17/180 (9%)
Frame = +1
Query: 73 CAQALMAGACSTSQTFSRVVAWRQE----------PSLLIQESLSLQASNNN*SNAASAC 222
C+ +AGACST V A ++ P L + + S + S + C
Sbjct: 143 CSWRALAGACSTDHAKGAVEAGLRDRHDSGQQQPRPPLSMAQKRSKKQKAQGPSE-SRPC 201
Query: 223 SQLGLFASEGPGDALCVASCRGPALADHCWYPSPSCGTAVQGPPAAAFTNTPCAE*QPGR 402
S+ + G G C HC +P P PP A FT TP E + G
Sbjct: 202 SEEPSVRAPGAGGEQCSEMLGPQRSKGHCLWPPP---LHPGSPPPADFTATPLGELREGA 258
Query: 403 PQPSARPGCGHPSIFIYISTKRC-------GHPSGGRGARRNAADSAAHAVCGAAHADVG 561
A P CG +R G P GGRG+R + H V A +G
Sbjct: 259 QNQEA-PPCGQCQPIRREQARRLPGIGDERGGPLGGRGSRAR----SEHKVSLVGDAGIG 313
>ref|ZP_00054940.1| COG2208: Serine phosphatase RsbU, regulator of sigma subunit
[Magnetospirillum magnetotacticum]
Length = 619
Score = 37.0 bits (84), Expect = 0.20
Identities = 29/76 (38%), Positives = 37/76 (48%), Gaps = 7/76 (9%)
Frame = +2
Query: 230 WASSPQKARGMRSAWPLAEVPHSPTIAGIPR--HHAVPRFRGLP----QPPSPTRLVQSS 391
W SSP R SA PLA +P + + PR H A R RGL +P SP+ +
Sbjct: 11 WPSSPIWRRWGASACPLAALPRAGWQSACPRKQHRANARDRGLASVIMEPTSPSPRARPV 70
Query: 392 N-QAGPSPLRDRDVAT 436
N PSP + RD+ T
Sbjct: 71 NVPTPPSPPQIRDIGT 86
>ref|NP_625832.1| putative nicotinate-nucleotide-dimethylbenzimidazole
phosphoribosyltransferase [Streptomyces coelicolor
A3(2)] gi|7106671|emb|CAB76073.1| putative
nicotinate-nucleotide-dimethylbenzimidazole
phosphoribosyltransferase [Streptomyces coelicolor
A3(2)]
Length = 1212
Score = 36.6 bits (83), Expect = 0.26
Identities = 28/79 (35%), Positives = 32/79 (40%)
Frame = -2
Query: 566 LPPTSA*AAPQTA*AAESAALRRAPRPPDGCPQRLVEMYMKMLGWPHPGRAEGWGRPGCY 387
+P TSA A + A R P PP CP+ L + P P A WG
Sbjct: 116 IPDTSASPVRSLADRGPADAPVRHPGPPTACPEYLD---VPQAAVPTPQAAAPWGAQTAP 172
Query: 386 SAQGVLVKAAAGGP*TAVP 330
AQ V V A AG T VP
Sbjct: 173 QAQEVPVNAGAGHAETVVP 191
>ref|ZP_00052774.1| COG2352: Phosphoenolpyruvate carboxylase [Magnetospirillum
magnetotacticum]
Length = 797
Score = 36.6 bits (83), Expect = 0.26
Identities = 35/104 (33%), Positives = 44/104 (41%), Gaps = 4/104 (3%)
Frame = +2
Query: 182 RPLITTKAMLPAHVLNWASSPQKARGMRSAWPLAEVPHSPTIAGIPRHHAVPRFRGLPQ- 358
RP+ ++ A ++SP +AR RS P A P PR + P R
Sbjct: 649 RPIAASRPSRRARSTGASASPSRARSSRSNMPTAVPPPIRWSCWRPRSSSTPCSRRAAAT 708
Query: 359 ---PPSPTRLVQSSNQAGPSPLRDRDVATPASSYTSRPSAADTR 481
P S TR +S GP P+ T ASS TSRP A TR
Sbjct: 709 ALGPNSTTRWRRSRAPLGP-PMSTCSRPT-ASSTTSRPRAPSTR 750
>dbj|BAC84821.1| hypothetical protein [Oryza sativa (japonica cultivar-group)]
Length = 83
Score = 35.8 bits (81), Expect = 0.44
Identities = 28/83 (33%), Positives = 37/83 (43%), Gaps = 3/83 (3%)
Frame = +2
Query: 275 PLAEVPHSPTIAGIPRHHAVPRFRGLPQPPSP---TRLVQSSNQAGPSPLRDRDVATPAS 445
PLA P A P A P R P PPSP + +AGP R D A A
Sbjct: 2 PLAPTPPPRPHAAGPDTAAAPPRRRAPTPPSPHAAAAAAPARRRAGP---RRPDAAATAR 58
Query: 446 SYTSRPSAADTRREDEEHGATQL 514
+ +RP+ T RE+++ A+ L
Sbjct: 59 HFRARPNV--TEREEQKTSASSL 79
