KCC000837A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC000837A_C01 KCC000837A_c01
tgcccacaagcaCTTGCACGTCCATCCGCTGAGGCTCACCCCGCAAAGCGCGAGGTATCC
GAGTCCTCGTTCTGATTCTCGTTAAGCGGGGCTCGTCCGACCGCGCCAGACGCGCGCGCG
TGGAGCAAGCTATCTTACAAGCACCTAGCTGCTACAAGTCAGCCGCACAGCGTCTCCCCC
GCCTGTCTTAGCGCGGCGTGCAGAGGTATGACTGACGCGCACGTCGTTGCCGTCAGGATG
CAGGCGCCCGAGCAGCCGCCGTCGCCTATCGGCAGAAACAGCAGCCAAATCCCTGTTGGG
GATCATAACGACCTGGCCATCGCTGTGACTGCGGCGGGCGGCGACGACTCGCACCTGGTG
GACGTGGTTTGGAAGAACCTCACTGTGACCAGCCGCAGGGCTAAGCGCCCGCTGCTGAAC
GATGTCACTGGAGCCATTACGGACGGATTCTATGCCATCATGGGCCCCTCTGGCTCTGGC
AAGTCCACTCTGTTGAACACGCTTGCATGCCGCCTGGATCGCGGCGTCACGTGGAGGGCG
AATGAAGCTGAACGG


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC000837A_C01 KCC000837A_c01
         (555 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|XP_321812.1| ENSANGP00000025353 [Anopheles gambiae] gi|30173...    60  2e-08
gb|AAC49491.1| ATP dependent permease                                  59  3e-08
emb|CAA60760.1| ATP dependent permease (yeast homolog) [Saccharo...    59  3e-08
emb|CAA99202.1| unnamed protein product [Saccharomyces cerevisiae]     59  3e-08
ref|NP_014654.1| ABC(ATP-binding cassette) protein involved in U...    59  3e-08

>ref|XP_321812.1| ENSANGP00000025353 [Anopheles gambiae] gi|30173884|gb|EAA01181.2|
           ENSANGP00000025353 [Anopheles gambiae str. PEST]
          Length = 158

 Score = 60.1 bits (144), Expect = 2e-08
 Identities = 33/76 (43%), Positives = 49/76 (64%), Gaps = 7/76 (9%)
 Frame = +1

Query: 325 VTAAGGDDSHLVDVVWKNLTVTSRRAK------RPLLNDVTGAITDG-FYAIMGPSGSGK 483
           V AA  DD   V ++W+NLT+T  R+K       P+LND++G +  G   A+MGPSG+GK
Sbjct: 32  VAAAAADDD--VTLIWQNLTITPIRSKPGAGEQHPVLNDISGTLQPGTLVALMGPSGAGK 89

Query: 484 STLLNTLACRLDRGVT 531
           +TL++ LA R+   +T
Sbjct: 90  TTLMSALAYRMSDKMT 105

>gb|AAC49491.1| ATP dependent permease
          Length = 453

 Score = 59.3 bits (142), Expect = 3e-08
 Identities = 35/108 (32%), Positives = 59/108 (54%)
 Frame = +1

Query: 205 GMTDAHVVAVRMQAPEQPPSPIGRNSSQIPVGDHNDLAIAVTAAGGDDSHLVDVVWKNLT 384
           G+  +H V+    +    P  I  ++ ++ + D+N+  I  T       H++   WKN+ 
Sbjct: 314 GIPKSHSVSSSSSSLSAVPYQISPSNKEMALNDYNEQPITETVE--TQKHIIS--WKNIN 369

Query: 385 VTSRRAKRPLLNDVTGAITDGFYAIMGPSGSGKSTLLNTLACRLDRGV 528
            T    K  L+N+ +G I+ G  A+MG SG+GK+TLLN L+ R++ GV
Sbjct: 370 YTVGTKK--LINNASGFISSGLTALMGESGAGKTTLLNVLSQRVETGV 415

>emb|CAA60760.1| ATP dependent permease (yeast homolog) [Saccharomyces cerevisiae]
          Length = 1006

 Score = 59.3 bits (142), Expect = 3e-08
 Identities = 35/108 (32%), Positives = 59/108 (54%)
 Frame = +1

Query: 205 GMTDAHVVAVRMQAPEQPPSPIGRNSSQIPVGDHNDLAIAVTAAGGDDSHLVDVVWKNLT 384
           G+  +H V+    +    P  I  ++ ++ + D+N+  I  T       H++   WKN+ 
Sbjct: 314 GIPKSHSVSSSSSSLSAVPYQISPSNKEMALNDYNEQPITETVE--TQKHIIS--WKNIN 369

Query: 385 VTSRRAKRPLLNDVTGAITDGFYAIMGPSGSGKSTLLNTLACRLDRGV 528
            T    K  L+N+ +G I+ G  A+MG SG+GK+TLLN L+ R++ GV
Sbjct: 370 YTVGTKK--LINNASGFISSGLTALMGESGAGKTTLLNVLSQRVETGV 415

>emb|CAA99202.1| unnamed protein product [Saccharomyces cerevisiae]
          Length = 1040

 Score = 59.3 bits (142), Expect = 3e-08
 Identities = 35/108 (32%), Positives = 59/108 (54%)
 Frame = +1

Query: 205 GMTDAHVVAVRMQAPEQPPSPIGRNSSQIPVGDHNDLAIAVTAAGGDDSHLVDVVWKNLT 384
           G+  +H V+    +    P  I  ++ ++ + D+N+  I  T       H++   WKN+ 
Sbjct: 348 GIPKSHSVSSSSSSLSAVPYQISPSNKEMALNDYNEQPITETVE--TQKHIIS--WKNIN 403

Query: 385 VTSRRAKRPLLNDVTGAITDGFYAIMGPSGSGKSTLLNTLACRLDRGV 528
            T    K  L+N+ +G I+ G  A+MG SG+GK+TLLN L+ R++ GV
Sbjct: 404 YTVGTKK--LINNASGFISSGLTALMGESGAGKTTLLNVLSQRVETGV 449

>ref|NP_014654.1| ABC(ATP-binding cassette) protein involved in Uptake of Sterols;
            Aus1p [Saccharomyces cerevisiae] gi|2131187|pir||S66876
            ATP-dependent transport protein homolog YOR011w - yeast
            (Saccharomyces cerevisiae) gi|1420108|emb|CAA99199.1|
            unnamed protein product [Saccharomyces cerevisiae]
          Length = 1394

 Score = 59.3 bits (142), Expect = 3e-08
 Identities = 35/108 (32%), Positives = 59/108 (54%)
 Frame = +1

Query: 205  GMTDAHVVAVRMQAPEQPPSPIGRNSSQIPVGDHNDLAIAVTAAGGDDSHLVDVVWKNLT 384
            G+  +H V+    +    P  I  ++ ++ + D+N+  I  T       H++   WKN+ 
Sbjct: 702  GIPKSHSVSSSSSSLSAVPYQISPSNKEMALNDYNEQPITETVE--TQKHIIS--WKNIN 757

Query: 385  VTSRRAKRPLLNDVTGAITDGFYAIMGPSGSGKSTLLNTLACRLDRGV 528
             T    K  L+N+ +G I+ G  A+MG SG+GK+TLLN L+ R++ GV
Sbjct: 758  YTVGTKK--LINNASGFISSGLTALMGESGAGKTTLLNVLSQRVETGV 803



EST assemble image


clone accession position
1 MXL048d07_r BP095856 1 463
2 CL74f02_r AV396456 13 555




Chlamydomonas reinhardtii
Kazusa DNA Research Institute