KCC000824A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC000824A_C01 KCC000824A_c01
ccaGGACGATCGCGGTAGTACGGCCGGCAGGGGCTGAACAGGCGGAGTGCTGTTGCGTAT
TATTTCTTTGGACACTTGACCAGCTTGTGACCGGACCGACGCAAATCCAAACACTATGTT
TGCAAAACTCACGGCCCTAGTAGGGGGTGGCTACACGTTCCCCTACACGCTTGAGGAAGC
CTATGAGAGTTCATGGGGCCAGTGGACGCACCACCGCGGCAAGTCGAAGGATGACAACTC
GCCGGTGTCAATTTTTCGCATCAGCGCCACGGACCCCAATGACCGCAAGCTGGTCTGCGC
CAGGAACGGTGTGAAGCGACTAAAAATGCTGCGCCACCCCAACCTCCTGGCGTATAAGGA
CAGCACGGAGATGAATGAGAAGGGAGCTACGGTGATAATGCTGGTGACGGAGCCGGTGAA
GCCACTGAAAGAGGTGCTGAAGGAGCTGGACCTGCAGGGGCAGCACAGGGACGAGTACTA
CTCCATGGGCATGCTGCACATGGCCAACGCCGTCAGCTTTCTC


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC000824A_C01 KCC000824A_c01
         (523 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

dbj|BAB93377.1| kinase-like protein [Oryza sativa (japonica cult...   147  8e-35
ref|NP_181605.2| HEAT repeat-containing protein [Arabidopsis tha...   130  8e-30
pir||B84833 hypothetical protein At2g40730 [imported] - Arabidop...   130  8e-30
ref|XP_318327.1| ENSANGP00000001712 [Anopheles gambiae] gi|21301...    82  5e-15
ref|XP_215190.2| similar to SCY1-like 1 [Rattus norvegicus]            67  1e-10

>dbj|BAB93377.1| kinase-like protein [Oryza sativa (japonica cultivar-group)]
          Length = 800

 Score =  147 bits (371), Expect = 8e-35
 Identities = 76/144 (52%), Positives = 95/144 (65%), Gaps = 8/144 (5%)
 Frame = +2

Query: 116 MFAKLTALVGGGYT----FPYTLEEAYESSWGQWTHHRGKSKDDNSPVSIFRISATDPND 283
           MF  L  +V G  +    FPYT+ E Y S+WG WTHHRG SKDD SPVSIF +S ++P D
Sbjct: 1   MFKFLKEVVAGSGSGLKDFPYTIGEPYASAWGSWTHHRGTSKDDGSPVSIFSLSGSNPQD 60

Query: 284 RKLVCARNGVKRLKMLRHPNLLAYKDSTEMNEKGAT----VIMLVTEPVKPLKEVLKELD 451
           R LV  RNGVKRL+ +RHPN+L++  STE            I +VTEPV PL E LKEL+
Sbjct: 61  RHLVAGRNGVKRLRTVRHPNILSFLHSTEAEVPDGPAMKHTIYIVTEPVTPLSEKLKELN 120

Query: 452 LQGQHRDEYYSMGMLHMANAVSFL 523
           L G  RDEY++ G+  ++ AVSFL
Sbjct: 121 LGGTQRDEYFAWGLHQISKAVSFL 144

>ref|NP_181605.2| HEAT repeat-containing protein [Arabidopsis thaliana]
          Length = 798

 Score =  130 bits (328), Expect = 8e-30
 Identities = 68/144 (47%), Positives = 91/144 (62%), Gaps = 8/144 (5%)
 Frame = +2

Query: 116 MFAKLTALVGGGYT----FPYTLEEAYESSWGQWTHHRGKSKDDNSPVSIFRISATDPND 283
           MF  L  +V G  T     PY + + Y S+WG W+H RG SKDD SPVSIF +S  +  D
Sbjct: 1   MFKFLKGVVAGSGTGLKDLPYNIGDPYPSAWGSWSHFRGTSKDDGSPVSIFALSGNNAQD 60

Query: 284 RKLVCARNGVKRLKMLRHPNLLAYKDSTEM-NEKGAT---VIMLVTEPVKPLKEVLKELD 451
             L   RNGVKRL+ +RHPN+L++  STE+    G+T    I +VTEPV PL + +KEL 
Sbjct: 61  GHLAAGRNGVKRLRTVRHPNILSFLHSTEVETHDGSTTKVTIYIVTEPVMPLSDKIKELG 120

Query: 452 LQGQHRDEYYSMGMLHMANAVSFL 523
           L+   RDEY+++G+  +  AVSFL
Sbjct: 121 LKATQRDEYFALGLHQIGKAVSFL 144

>pir||B84833 hypothetical protein At2g40730 [imported] - Arabidopsis thaliana
           gi|4895220|gb|AAD32806.1|AC007660_7 unknown protein
           [Arabidopsis thaliana]
          Length = 604

 Score =  130 bits (328), Expect = 8e-30
 Identities = 68/144 (47%), Positives = 91/144 (62%), Gaps = 8/144 (5%)
 Frame = +2

Query: 116 MFAKLTALVGGGYT----FPYTLEEAYESSWGQWTHHRGKSKDDNSPVSIFRISATDPND 283
           MF  L  +V G  T     PY + + Y S+WG W+H RG SKDD SPVSIF +S  +  D
Sbjct: 1   MFKFLKGVVAGSGTGLKDLPYNIGDPYPSAWGSWSHFRGTSKDDGSPVSIFALSGNNAQD 60

Query: 284 RKLVCARNGVKRLKMLRHPNLLAYKDSTEM-NEKGAT---VIMLVTEPVKPLKEVLKELD 451
             L   RNGVKRL+ +RHPN+L++  STE+    G+T    I +VTEPV PL + +KEL 
Sbjct: 61  GHLAAGRNGVKRLRTVRHPNILSFLHSTEVETHDGSTTKVTIYIVTEPVMPLSDKIKELG 120

Query: 452 LQGQHRDEYYSMGMLHMANAVSFL 523
           L+   RDEY+++G+  +  AVSFL
Sbjct: 121 LKATQRDEYFALGLHQIGKAVSFL 144

>ref|XP_318327.1| ENSANGP00000001712 [Anopheles gambiae] gi|21301371|gb|EAA13516.1|
           ENSANGP00000001712 [Anopheles gambiae str. PEST]
          Length = 860

 Score = 81.6 bits (200), Expect = 5e-15
 Identities = 47/124 (37%), Positives = 70/124 (55%), Gaps = 2/124 (1%)
 Frame = +2

Query: 158 FPYTLEEAYE--SSWGQWTHHRGKSKDDNSPVSIFRISATDPNDRKLVCARNGVKRLKML 331
           FPY + +  +  ++   W+  RGK K  N  VS+F     + +D KL  AR  +KRLK L
Sbjct: 13  FPYEIGDPVQQFNTKSIWSLFRGKRKGSNDEVSVFTYDIKNGSDIKLELARAALKRLKTL 72

Query: 332 RHPNLLAYKDSTEMNEKGATVIMLVTEPVKPLKEVLKELDLQGQHRDEYYSMGMLHMANA 511
           RHP++L + DS E ++    V+ + TEPV+PL   +  L  QG  RD Y + G+  +  A
Sbjct: 73  RHPSILQFLDSLESDK----VLYVATEPVEPLGTHIGNLAAQGPQRDLYLAWGIFQITRA 128

Query: 512 VSFL 523
           +SFL
Sbjct: 129 LSFL 132

>ref|XP_215190.2| similar to SCY1-like 1 [Rattus norvegicus]
          Length = 763

 Score = 67.0 bits (162), Expect = 1e-10
 Identities = 41/109 (37%), Positives = 55/109 (49%)
 Frame = +2

Query: 197 GQWTHHRGKSKDDNSPVSIFRISATDPNDRKLVCARNGVKRLKMLRHPNLLAYKDSTEMN 376
           G W  HRG+ K   S VSIF        + +   A+   KRLK LRHPN+LAY D  E  
Sbjct: 27  GPWVLHRGRKKATGSAVSIFVYDVKPGAEEQTQVAKAAFKRLKTLRHPNILAYIDGLETE 86

Query: 377 EKGATVIMLVTEPVKPLKEVLKELDLQGQHRDEYYSMGMLHMANAVSFL 523
           +     + +VTE V PL   LK     G  +++  S G+  +  A+SFL
Sbjct: 87  K----CLHIVTEAVTPLGTYLKARAEAGGLKEQELSWGLHQIVKALSFL 131



EST assemble image


clone accession position
1 LCL039f04_r AV628289 1 523
2 HCL014h03_r AV640358 4 390
3 CL71c05_r AV396901 24 507




Chlamydomonas reinhardtii
Kazusa DNA Research Institute