KCC000822A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC000822A_C01 KCC000822A_c01
gcgagcGCTATTATAGATAGGGTAGCCTGCGGGGCGTTTCTGGACCGTGTTGCCACGCCC
ATCGTGTACCCTTTCGATTTTGCGCTGCTAAGCCACAATGGCGTACATTCTTGATTTCCT
CTCGTACATGTGGGAGAAGAACAATGACGACTCTGCTTCCTACAAGGAGTGGCAGGACTT
CCTTGATGTCGCCGAGAAGGACCGCCGGCGCGATCGCATCATCGCGTGGCGCGAGCGGAC
CATGTATGACGATTACGCTGCAAACGCGGAGGAGCCCATCATTTACAAGCGCACAGCCGG
GTTCGTGTGGCGCGAGGTGGACCCCACCGGCCAGGCCAAGAACCGCAACCACACGTACAT
GTACAACCTGAAGACGTTTGGGCACCGCAGCTACACCCGGCGCGACCCCTCGGAGCTCCA
GGCGGCGGCCACCTCTGTTGAGGCGCGCGTCAAGTCCGGCGAGCTGGGCGGGCTGTCGCC
ACTGGCGTAAATG


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC000822A_C01 KCC000822A_c01
         (493 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

gb|AAF61923.1| SanE [Streptomyces ansochromogenes]                     48  7e-05
emb|CAA52910.1| mucin [Homo sapiens]                                   45  6e-04
ref|XP_039877.6| similar to Mucin 5B precursor (Mucin 5 subtype ...    45  6e-04
pir||S14292 transcription activator - Emericella nidulans              44  8e-04
sp|P21228|ALCR_EMENI Regulatory protein alcR gi|27549162|gb|AAA3...    44  8e-04

>gb|AAF61923.1| SanE [Streptomyces ansochromogenes]
          Length = 189

 Score = 47.8 bits (112), Expect = 7e-05
 Identities = 47/127 (37%), Positives = 58/127 (45%), Gaps = 17/127 (13%)
 Frame = +3

Query: 135 RRTMTTLLPT----RSGRTSLMSPR--RTAGAIASSRGASGPCMTITLQTRRSPSFTSAQ 296
           R T +T +P     RS RT+  +PR  R   A  S+ G+S  C + +  TR S S   A 
Sbjct: 64  RWTRSTTVPAGPTGRSSRTTWSAPRGHRRGSATPSTTGSSATC-SASAPTRSSGSTCPAG 122

Query: 297 PGS---CGARWTPPARPRTATT-------RTCTT*RRLGTAATPG-ATPRSSRRRPPLLR 443
           P     CGARW+ P R     T       R C T  R    A PG +TP    RRP  L 
Sbjct: 123 PSCAACCGARWSGPPRAGNCGTATGRPGGRCCAT--RATRCAGPGPSTPPGGPRRP--LS 178

Query: 444 RASSPAS 464
            A +PAS
Sbjct: 179 SACTPAS 185

>emb|CAA52910.1| mucin [Homo sapiens]
          Length = 622

 Score = 44.7 bits (104), Expect = 6e-04
 Identities = 32/107 (29%), Positives = 44/107 (40%), Gaps = 8/107 (7%)
 Frame = +3

Query: 114 ISSRTCGRRTMTTLLPTRSGRTSLMSPRRTA--------GAIASSRGASGPCMTITLQTR 269
           +S  T    TM+T  P+ +  T   S   TA        G++A+     G   T  + T 
Sbjct: 368 LSQTTTPTATMSTATPSSTPETVHTSTVLTATATTTGATGSVATPSSTPGTAHTTKVPTT 427

Query: 270 RSPSFTSAQPGSCGARWTPPARPRTATTRTCTT*RRLGTAATPGATP 410
            +  FT+    S G   TPP    T TT T TT    G+  TP + P
Sbjct: 428 TTTGFTATPSSSPGTALTPPVWISTTTTPTTTTPTTSGSTVTPSSIP 474

 Score = 43.9 bits (102), Expect = 0.001
 Identities = 33/108 (30%), Positives = 51/108 (46%)
 Frame = +3

Query: 141 TMTTLLPTRSGRTSLMSPRRTAGAIASSRGASGPCMTITLQTRRSPSFTSAQPGSCGARW 320
           T TT  PT SG T  ++P    G   ++R  +    T+   +  +PS ++   G      
Sbjct: 455 TPTTTTPTTSGST--VTPSSIPGTTHTARVLTTTTTTVATGSMATPSSSTQTSG------ 506

Query: 321 TPPARPRTATTRTCTT*RRLGTAATPGATPRSSRRRPPLLRRASSPAS 464
           TPP+   TATT T T     G+   P +TP ++   P L   A++PA+
Sbjct: 507 TPPSLTTTATTITAT-----GSTTNPSSTPGTTPIPPVLTSTATTPAA 549

 Score = 34.7 bits (78), Expect = 0.65
 Identities = 32/116 (27%), Positives = 44/116 (37%), Gaps = 21/116 (18%)
 Frame = +3

Query: 126 TCGRRTMTTLLPTRSGRTSLMSPRRTAGAIASSRGASGPCMTITLQTRRSPSFTSAQPGS 305
           T G   ++T   T +  +S  +P  + G   +      P +  T  T  + SFT+    S
Sbjct: 306 TAGTPHVSTTATTPTVTSSKATPSSSPGTATAL-----PALRSTATTPTATSFTAIPSSS 360

Query: 306 CGARW-------TPPARPRTAT--------------TRTCTT*RRLGTAATPGATP 410
            G  W       TP A   TAT              T T TT    G+ ATP +TP
Sbjct: 361 LGTTWTRLSQTTTPTATMSTATPSSTPETVHTSTVLTATATTTGATGSVATPSSTP 416

 Score = 33.5 bits (75), Expect = 1.5
 Identities = 30/93 (32%), Positives = 40/93 (42%)
 Frame = +3

Query: 141 TMTTLLPTRSGRTSLMSPRRTAGAIASSRGASGPCMTITLQTRRSPSFTSAQPGSCGARW 320
           T TT   T S  TS  SPR TA  +        P +T T     + SFT     +    W
Sbjct: 543 TATTPAATSSKATSSSSPR-TATTL--------PVLTSTATKSTATSFTPIPSSTLWTTW 593

Query: 321 TPPARPRTATTRTCTT*RRLGTAATPGATPRSS 419
           T PA+    TT   +T   + T++TP  T  S+
Sbjct: 594 TVPAQ----TTTPMSTMSTIHTSSTPETTHTST 622

 Score = 30.8 bits (68), Expect = 9.4
 Identities = 33/128 (25%), Positives = 51/128 (39%), Gaps = 10/128 (7%)
 Frame = +3

Query: 111 LISSRTCGRRTMTTLLPTRSGRTSLMSPRRTAGAIASS---RGASGP-------CMTITL 260
           L ++ T    T  T +P+ +  T+   P +T   +A+      +S P        +T   
Sbjct: 142 LTTTATKSTATSVTPIPSSTLGTTGTLPEQTTTPVATMSTIHPSSTPETTHTSTVLTTKA 201

Query: 261 QTRRSPSFTSAQPGSCGARWTPPARPRTATTRTCTT*RRLGTAATPGATPRSSRRRPPLL 440
            T R+ S TS    + G  W       T  T   TT    G  ATP +TP ++     L 
Sbjct: 202 TTTRATSSTSTPSSTPGTTWI-----LTELTTAATTTAGTGPTATPSSTPGTTWILTELT 256

Query: 441 RRASSPAS 464
             A++ AS
Sbjct: 257 TTATTTAS 264

 Score = 30.8 bits (68), Expect = 9.4
 Identities = 30/120 (25%), Positives = 47/120 (39%), Gaps = 4/120 (3%)
 Frame = +3

Query: 48  CCHAHRVPFRFCAAKPQWRTFLISSRTCGRRTMTTLLPTRSGRT----SLMSPRRTAGAI 215
           CC+     +  C + P   +  + S T G   + T L T +  T    S  +P  T G  
Sbjct: 53  CCN-----YGHCPSTPATSSTAMPSSTPGTTWILTELTTTATTTASTGSTATPSSTPGTA 107

Query: 216 ASSRGASGPCMTITLQTRRSPSFTSAQPGSCGARWTPPARPRTATTRTCTT*RRLGTAAT 395
              +  + P  T T  + ++ S +S +  +     T  A   TAT+ T      LGT  T
Sbjct: 108 PPPKVLTSPATTPTATSSKATSSSSPRTATTLPVLTTTATKSTATSVTPIPSSTLGTTGT 167

>ref|XP_039877.6| similar to Mucin 5B precursor (Mucin 5 subtype B, tracheobronchial)
            (High molecular weight salivary mucin MG1) (Sublingual
            gland mucin) [Homo sapiens]
          Length = 5858

 Score = 44.7 bits (104), Expect = 6e-04
 Identities = 32/107 (29%), Positives = 44/107 (40%), Gaps = 8/107 (7%)
 Frame = +3

Query: 114  ISSRTCGRRTMTTLLPTRSGRTSLMSPRRTA--------GAIASSRGASGPCMTITLQTR 269
            +S  T    TM+T  P+ +  T   S   TA        G++A+     G   T  + T 
Sbjct: 4633 LSQTTTPTATMSTATPSSTPETVHTSTVLTATATTTGATGSVATPSSTPGTAHTTKVPTT 4692

Query: 270  RSPSFTSAQPGSCGARWTPPARPRTATTRTCTT*RRLGTAATPGATP 410
             +  FT+    S G   TPP    T TT T TT    G+  TP + P
Sbjct: 4693 TTTGFTATPSSSPGTALTPPVWISTTTTPTTTTPTTSGSTVTPSSIP 4739

 Score = 44.3 bits (103), Expect = 8e-04
 Identities = 33/108 (30%), Positives = 51/108 (46%)
 Frame = +3

Query: 141  TMTTLLPTRSGRTSLMSPRRTAGAIASSRGASGPCMTITLQTRRSPSFTSAQPGSCGARW 320
            T TT  PT SG T  ++P    G   ++R  +    T+   +  +PS ++   G      
Sbjct: 4720 TPTTTTPTTSGST--VTPSSIPGTTHTARVLTTTTTTVATGSMATPSSSTQTSG------ 4771

Query: 321  TPPARPRTATTRTCTT*RRLGTAATPGATPRSSRRRPPLLRRASSPAS 464
            TPP+   TATT T T     G+   P +TP ++   P L   A++PA+
Sbjct: 4772 TPPSLTTTATTITAT-----GSTTNPSSTPGTTPITPVLTSTATTPAA 4814

 Score = 39.3 bits (90), Expect = 0.026
 Identities = 31/106 (29%), Positives = 48/106 (45%)
 Frame = +3

Query: 147  TTLLPTRSGRTSLMSPRRTAGAIASSRGASGPCMTITLQTRRSPSFTSAQPGSCGARWTP 326
            TT  PT SG T  ++P    G   +    +    T+   +  +PS ++   G      TP
Sbjct: 3989 TTTTPTTSGST--VTPSSVPGTTHTPTVLTTTTTTVATGSMATPSSSTQTSG------TP 4040

Query: 327  PARPRTATTRTCTT*RRLGTAATPGATPRSSRRRPPLLRRASSPAS 464
            P+   TATT T T     G+   P +TP ++   P L   A++PA+
Sbjct: 4041 PSLITTATTITAT-----GSTTNPSSTPGTTPIPPVLTTTATTPAA 4081

 Score = 38.9 bits (89), Expect = 0.035
 Identities = 31/125 (24%), Positives = 49/125 (38%), Gaps = 8/125 (6%)
 Frame = +3

Query: 114  ISSRTCGRRTMTTLLP--------TRSGRTSLMSPRRTAGAIASSRGASGPCMTITLQTR 269
            +S  T    TM+T  P        T +  T+  +  R  G++A+     G   T  + T 
Sbjct: 3403 LSQTTTPTATMSTATPSSTPETVHTSTVLTTTTTTTRATGSVATPSSTPGTAHTTKVPTT 3462

Query: 270  RSPSFTSAQPGSCGARWTPPARPRTATTRTCTT*RRLGTAATPGATPRSSRRRPPLLRRA 449
             +  FT+    S G   TPP    T TT T       G+  TP + P ++     L    
Sbjct: 3463 TTTGFTATPSSSPGTALTPPVWISTTTTPTTR-----GSTVTPSSIPGTTHTATVLTTTT 3517

Query: 450  SSPAS 464
            ++ A+
Sbjct: 3518 TTVAT 3522

 Score = 38.9 bits (89), Expect = 0.035
 Identities = 32/125 (25%), Positives = 50/125 (39%), Gaps = 8/125 (6%)
 Frame = +3

Query: 114  ISSRTCGRRTMTTLLPTRSGRTSLMSPRRTA--------GAIASSRGASGPCMTITLQTR 269
            +S  T    TM+T  P+ +  T+  S   TA        G++A+     G   T  + T 
Sbjct: 2146 LSQTTTPTATMSTATPSSTPETAHTSTVLTATATTTGATGSVATPSSTPGTAHTTKVPTT 2205

Query: 270  RSPSFTSAQPGSCGARWTPPARPRTATTRTCTT*RRLGTAATPGATPRSSRRRPPLLRRA 449
             +  FT+    S G   TPP    T TT T       G+  TP + P ++     L    
Sbjct: 2206 TTTGFTATPSSSPGTALTPPVWISTTTTPTTR-----GSTVTPSSIPGTTHTATVLTTTT 2260

Query: 450  SSPAS 464
            ++ A+
Sbjct: 2261 TTVAT 2265

 Score = 38.5 bits (88), Expect = 0.045
 Identities = 30/106 (28%), Positives = 48/106 (44%)
 Frame = +3

Query: 147  TTLLPTRSGRTSLMSPRRTAGAIASSRGASGPCMTITLQTRRSPSFTSAQPGSCGARWTP 326
            TT  PT  G T  ++P    G   ++   +    T+   +  +PS ++   G      TP
Sbjct: 2230 TTTTPTTRGST--VTPSSIPGTTHTATVLTTTTTTVATGSMATPSSSTQTSG------TP 2281

Query: 327  PARPRTATTRTCTT*RRLGTAATPGATPRSSRRRPPLLRRASSPAS 464
            P+   TATT T T     G+   P +TP ++   P L   A++PA+
Sbjct: 2282 PSLTTTATTITAT-----GSTTNPSSTPGTTPIPPVLTTTATTPAA 2322

 Score = 38.1 bits (87), Expect = 0.059
 Identities = 36/111 (32%), Positives = 43/111 (38%), Gaps = 21/111 (18%)
 Frame = +3

Query: 141  TMTTLLPTRSGRTSLMSPRRTAGAIASSRGASGPCMTITLQTRRSPSFTSAQPGSCGARW 320
            T TT   T S  T   SP  TA A+        P +  T  T  + SFT+    S G  W
Sbjct: 3852 TATTPTVTSSKATPFSSPG-TATAL--------PALRSTATTPTATSFTAIPSSSLGTTW 3902

Query: 321  T----------------PPARPRTA-----TTRTCTT*RRLGTAATPGATP 410
            T                P + P TA      T T TT R  G+ ATP +TP
Sbjct: 3903 TRLSQTTTPTATMSTATPSSTPETAHTSTVLTTTATTTRATGSVATPSSTP 3953

 Score = 35.0 bits (79), Expect = 0.50
 Identities = 36/111 (32%), Positives = 42/111 (37%), Gaps = 21/111 (18%)
 Frame = +3

Query: 141  TMTTLLPTRSGRTSLMSPRRTAGAIASSRGASGPCMTITLQTRRSPSFTSAQPGSCGARW 320
            T TT   T S  T   SP  TA A+        P +  T  T  + SFT+    S G  W
Sbjct: 2650 TATTPTVTSSKATPFSSPG-TATAL--------PALRSTATTPTATSFTAIPSSSLGTTW 2700

Query: 321  -------TPPARPRTAT--------------TRTCTT*RRLGTAATPGATP 410
                   TP A   TAT              T T TT    G+ ATP +TP
Sbjct: 2701 TRLSQTTTPTATMSTATPSSTPETVHTSTVLTTTATTTGATGSVATPSSTP 2751

 Score = 34.7 bits (78), Expect = 0.65
 Identities = 32/116 (27%), Positives = 44/116 (37%), Gaps = 21/116 (18%)
 Frame = +3

Query: 126  TCGRRTMTTLLPTRSGRTSLMSPRRTAGAIASSRGASGPCMTITLQTRRSPSFTSAQPGS 305
            T G   ++T   T +  +S  +P  + G   +      P +  T  T  + SFT+    S
Sbjct: 4571 TAGTPHVSTTATTPTVTSSKATPSSSPGTATAL-----PALRSTATTPTATSFTAIPSSS 4625

Query: 306  CGARW-------TPPARPRTAT--------------TRTCTT*RRLGTAATPGATP 410
             G  W       TP A   TAT              T T TT    G+ ATP +TP
Sbjct: 4626 LGTTWTRLSQTTTPTATMSTATPSSTPETVHTSTVLTATATTTGATGSVATPSSTP 4681

 Score = 34.7 bits (78), Expect = 0.65
 Identities = 33/116 (28%), Positives = 50/116 (42%)
 Frame = +3

Query: 117  SSRTCGRRTMTTLLPTRSGRTSLMSPRRTAGAIASSRGASGPCMTITLQTRRSPSFTSAQ 296
            ++RT      TT  PT  G T  ++P    G   +    +    T+   +  +PS ++  
Sbjct: 2777 TARTLPVWISTTTTPTTRGST--VTPSSIPGTTHTPTVLTTTTTTVATGSMATPSSSTQT 2834

Query: 297  PGSCGARWTPPARPRTATTRTCTT*RRLGTAATPGATPRSSRRRPPLLRRASSPAS 464
             G      TPP+   TATT T T       ++TPG TP      P L   A++PA+
Sbjct: 2835 SG------TPPSLTTTATTITATG-STTNPSSTPGTTPIP----PVLTTTATTPAA 2879

 Score = 33.5 bits (75), Expect = 1.5
 Identities = 30/93 (32%), Positives = 40/93 (42%)
 Frame = +3

Query: 141  TMTTLLPTRSGRTSLMSPRRTAGAIASSRGASGPCMTITLQTRRSPSFTSAQPGSCGARW 320
            T TT   T S  TS  SPR TA  +        P +T T     + SFT     +    W
Sbjct: 4808 TATTPAATSSKATSSSSPR-TATTL--------PVLTSTATKSTATSFTPIPSSTLWTTW 4858

Query: 321  TPPARPRTATTRTCTT*RRLGTAATPGATPRSS 419
            T PA+    TT   +T   + T++TP  T  S+
Sbjct: 4859 TVPAQ----TTTPMSTMSTIHTSSTPETTHTST 4887

 Score = 33.1 bits (74), Expect = 1.9
 Identities = 32/115 (27%), Positives = 44/115 (37%), Gaps = 25/115 (21%)
 Frame = +3

Query: 141  TMTTLLPTRSGRTSLMSPRRTAG-AIASSRGASGPCMTITLQTRRSPSFTSAQP---GSC 308
            T+ T  P +   T+  +P  T+  A  SS   +   +     T  +P+ TS  P    S 
Sbjct: 2080 TLRTAPPPKVLTTTATTPTVTSSKATPSSSPGTATALPALRSTATTPTATSVTPIPSSSL 2139

Query: 309  GARWT----------------PPARPRTA-----TTRTCTT*RRLGTAATPGATP 410
            G  WT                P + P TA      T T TT    G+ ATP +TP
Sbjct: 2140 GTTWTRLSQTTTPTATMSTATPSSTPETAHTSTVLTATATTTGATGSVATPSSTP 2194

 Score = 32.7 bits (73), Expect = 2.5
 Identities = 34/128 (26%), Positives = 51/128 (39%), Gaps = 10/128 (7%)
 Frame = +3

Query: 111  LISSRTCGRRTMTTLLPTRSGRTSLMSPRRTAGAIASS---RGASGP-------CMTITL 260
            L S+ T    T  T +P+ +  T+   P +T   +A+      +S P        +T   
Sbjct: 4407 LTSTATKSTATSVTPIPSSTLGTTGTLPEQTTTPVATMSTIHPSSTPETTHTSTVLTTKA 4466

Query: 261  QTRRSPSFTSAQPGSCGARWTPPARPRTATTRTCTT*RRLGTAATPGATPRSSRRRPPLL 440
             T R+ S TS    + G  W        ATT   T     G  ATP +TP ++     L 
Sbjct: 4467 TTTRATSSTSTPSSTPGTTWILTELTTAATTTAAT-----GPTATPSSTPGTTWILTELT 4521

Query: 441  RRASSPAS 464
              A++ AS
Sbjct: 4522 TTATTTAS 4529

 Score = 32.3 bits (72), Expect = 3.2
 Identities = 31/123 (25%), Positives = 52/123 (42%), Gaps = 5/123 (4%)
 Frame = +3

Query: 111  LISSRTCGRRTMTTLLPTRSGRTSLMSPRRTAGAIASSRGASGPCMTITLQTRRSPSFTS 290
            L S+ T    T +    + S RT+   P  T+ A  S+  +  P  + TL T  +    +
Sbjct: 3176 LTSTATTPTATSSKATSSSSPRTATTLPVLTSTATKSTATSFTPIPSFTLGTTGTLPEQT 3235

Query: 291  AQPGSCGARWTPPARPRTATTRT-----CTT*RRLGTAATPGATPRSSRRRPPLLRRASS 455
              P +  +   P + P T  T T      TT R   + +TP +TP ++     L   A++
Sbjct: 3236 TTPMATMSTIHPSSTPETTHTSTVLTTKATTTRATSSMSTPSSTPGTTWILTELTTAATT 3295

Query: 456  PAS 464
             A+
Sbjct: 3296 TAA 3298

 Score = 31.6 bits (70), Expect = 5.5
 Identities = 32/103 (31%), Positives = 44/103 (42%), Gaps = 1/103 (0%)
 Frame = +3

Query: 105  TFLISSRTCGRRTMTTLLPTRS-GRTSLMSPRRTAGAIASSRGASGPCMTITLQTRRSPS 281
            T L +  T  R T +T  P+ + G T +++   TA   A++  A+GP  T        PS
Sbjct: 4460 TVLTTKATTTRATSSTSTPSSTPGTTWILTELTTA---ATTTAATGPTAT--------PS 4508

Query: 282  FTSAQPGSCGARWTPPARPRTATTRTCTT*RRLGTAATPGATP 410
             T       G  W       TATT   T     G+ ATP +TP
Sbjct: 4509 STP------GTTWILTELTTTATTTAST-----GSTATPSSTP 4540

 Score = 30.8 bits (68), Expect = 9.4
 Identities = 30/120 (25%), Positives = 47/120 (39%), Gaps = 4/120 (3%)
 Frame = +3

Query: 48   CCHAHRVPFRFCAAKPQWRTFLISSRTCGRRTMTTLLPTRSGRT----SLMSPRRTAGAI 215
            CC+     +  C + P   +  + S T G   + T L T +  T    S  +P  T G  
Sbjct: 4318 CCN-----YGHCPSTPATSSTAMPSSTPGTTWILTELTTTATTTASTGSTATPSSTPGTA 4372

Query: 216  ASSRGASGPCMTITLQTRRSPSFTSAQPGSCGARWTPPARPRTATTRTCTT*RRLGTAAT 395
               +  + P  T T  + ++ S +S +  +     T  A   TAT+ T      LGT  T
Sbjct: 4373 PPPKVLTSPATTPTATSSKATSSSSPRTATTLPVLTSTATKSTATSVTPIPSSTLGTTGT 4432

>pir||S14292 transcription activator - Emericella nidulans
          Length = 119

 Score = 44.3 bits (103), Expect = 8e-04
 Identities = 25/74 (33%), Positives = 32/74 (42%), Gaps = 15/74 (20%)
 Frame = -3

Query: 197 SRRHQGSPATPCRKQSRHCSSP---------------TCTRGNQECTPLWLSSAKSKGYT 63
           +RR Q     PCRK  R C +P                C R N++CT  WLSS +SK   
Sbjct: 4   TRRRQNHSCDPCRKGKRRCDAPENRNEANENGWVSCSNCKRWNKDCTFNWLSSQRSKAKG 63

Query: 62  MGVATRSRNAPQAT 21
                R++ A  AT
Sbjct: 64  AAPRARTKKARTAT 77

>sp|P21228|ALCR_EMENI Regulatory protein alcR gi|27549162|gb|AAA33292.2| AlcR [Emericella
           nidulans]
          Length = 821

 Score = 44.3 bits (103), Expect = 8e-04
 Identities = 25/74 (33%), Positives = 32/74 (42%), Gaps = 15/74 (20%)
 Frame = -3

Query: 197 SRRHQGSPATPCRKQSRHCSSP---------------TCTRGNQECTPLWLSSAKSKGYT 63
           +RR Q     PCRK  R C +P                C R N++CT  WLSS +SK   
Sbjct: 4   TRRRQNHSCDPCRKGKRRCDAPENRNEANENGWVSCSNCKRWNKDCTFNWLSSQRSKAKG 63

Query: 62  MGVATRSRNAPQAT 21
                R++ A  AT
Sbjct: 64  AAPRARTKKARTAT 77



EST assemble image


clone accession position
1 MX024h01_r BP087089 1 428
2 MX228b11_r BP090728 7 300
3 CL71a04_r AV396876 10 493
4 CL74f09_r AV396473 96 493




Chlamydomonas reinhardtii
Kazusa DNA Research Institute