KCC000765A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC000765A_C01 KCC000765A_c01
ggtagtcgtaacgtctcaagtatcggacgcactatttgcaactgcttattttcgcatggc
tcccccatcaatgaacttgcTTCGTCCCTATGGCCTCCCATCGAGCGTGCAAGGTATCAC
CGTGTATACACATGCTAAATATACTTCGTTAAATTGGAGTTCACCGCGGAGGCCTGAACA
TTTTGCCGAACCGCTCCTGAGGAAGCAGAACGAATAGCAGTGCATACAAATAGCCATGGC
GGACAGGGTACTTGCCCTGGTCCATTACTATGCTCGCGAGGGCTATTTTAGACATGTGCA
GACGGTGTGCAACGAAGTGCTCAAGAAGCGGCCGGGAGATGGCGTACTCACATTCTGGCG
TGCCTATGGACTGCTCATGGAGGGCAACACGGCGGACGCCATGCGTGACCTCTCCAGCAT
CCAGGGCAATTCTGACCTTGAGCTGGCGGTCGCAGCCGCGCAACTACTGGGTCACGAATC
CGCCAAGGTGCCCGACCACGATGCCATCATTGACCTCCAAGCCAAGCTGGAGATCGAGGA
GCGCACCGCCAGCGACCAGCCCTGCCTGCACCTGGCCTCCTTCTACCTGTATACCAAGTC
CAAGGAGCGCGCCCGCGGTCTGGTGGAGCGCGTGCTGCGCAACCAGCCCGACATGGTGCC
GGCGCAGGTTCTTCTGGGCTGGATCATCATCAG


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC000765A_C01 KCC000765A_c01
         (693 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_079029.2| hypothetical protein FLJ11457 [Homo sapiens] gi...    92  6e-18
dbj|BAB71404.1| unnamed protein product [Homo sapiens]                 92  6e-18
ref|XP_130319.2| RIKEN cDNA 2410066K11 [Mus musculus]                  91  2e-17
dbj|BAC26695.1| unnamed protein product [Mus musculus]                 84  3e-15
ref|XP_135216.1| RIKEN cDNA 4921538N17 [Mus musculus]                  84  3e-15

>ref|NP_079029.2| hypothetical protein FLJ11457 [Homo sapiens]
           gi|33417188|gb|AAH55424.1| FLJ11457 protein [Homo
           sapiens]
          Length = 1316

 Score = 92.4 bits (228), Expect = 6e-18
 Identities = 44/145 (30%), Positives = 79/145 (54%)
 Frame = +2

Query: 257 LVHYYAREGYFRHVQTVCNEVLKKRPGDGVLTFWRAYGLLMEGNTADAMRDLSSIQGNSD 436
           L++YY +E YF HV  V +E +K+   D V  F+ AYG LMEG T +A+R+  +I+   D
Sbjct: 9   LINYYCQERYFHHVLLVASEGIKRYGSDPVFRFYHAYGTLMEGKTQEALREFEAIKNKQD 68

Query: 437 LELAVAAAQLLGHESAKVPDHDAIIDLQAKLEIEERTASDQPCLHLASFYLYTKSKERAR 616
           + L    A +  H+ +  PD +AI++  A+++ + + A ++   H   F  +    ++AR
Sbjct: 69  VSLCSLLALIYAHKMSPNPDREAILESDARVKEQRKGAGEKALYHAGLFLWHIGRHDKAR 128

Query: 617 GLVERVLRNQPDMVPAQVLLGWIII 691
             ++R+++         VL  W+ I
Sbjct: 129 EYIDRMIKISDGSKQGHVLKAWLDI 153

>dbj|BAB71404.1| unnamed protein product [Homo sapiens]
          Length = 701

 Score = 92.4 bits (228), Expect = 6e-18
 Identities = 44/145 (30%), Positives = 79/145 (54%)
 Frame = +2

Query: 257 LVHYYAREGYFRHVQTVCNEVLKKRPGDGVLTFWRAYGLLMEGNTADAMRDLSSIQGNSD 436
           L++YY +E YF HV  V +E +K+   D V  F+ AYG LMEG T +A+R+  +I+   D
Sbjct: 9   LINYYCQERYFHHVLLVASEGIKRYGSDPVFRFYHAYGTLMEGKTQEALREFEAIKNKQD 68

Query: 437 LELAVAAAQLLGHESAKVPDHDAIIDLQAKLEIEERTASDQPCLHLASFYLYTKSKERAR 616
           + L    A +  H+ +  PD +AI++  A+++ + + A ++   H   F  +    ++AR
Sbjct: 69  VSLCSLLALIYAHKMSPNPDREAILESDARVKEQRKGAGEKALYHAGLFLWHIGRHDKAR 128

Query: 617 GLVERVLRNQPDMVPAQVLLGWIII 691
             ++R+++         VL  W+ I
Sbjct: 129 EYIDRMIKISDGSKQGHVLKAWLDI 153

>ref|XP_130319.2| RIKEN cDNA 2410066K11 [Mus musculus]
          Length = 515

 Score = 90.5 bits (223), Expect = 2e-17
 Identities = 44/145 (30%), Positives = 77/145 (52%)
 Frame = +2

Query: 257 LVHYYAREGYFRHVQTVCNEVLKKRPGDGVLTFWRAYGLLMEGNTADAMRDLSSIQGNSD 436
           L++YY +E Y+ HV  V +E +KK   D V  F+ AYG LMEG   +A+R+  +I+   D
Sbjct: 9   LINYYCQERYYHHVLLVASEGMKKYSSDPVFRFYHAYGTLMEGKAQEALREFEAIKNKQD 68

Query: 437 LELAVAAAQLLGHESAKVPDHDAIIDLQAKLEIEERTASDQPCLHLASFYLYTKSKERAR 616
           + L    A +  H+ +  PD +AI++L  K++ + + A  +   H   F  +    ++AR
Sbjct: 69  VSLCSLMALMYVHKMSPNPDREAILELDTKMKEQRKEAGRKALYHAGLFLWHIGRHDKAR 128

Query: 617 GLVERVLRNQPDMVPAQVLLGWIII 691
             ++R+ +   D     +L  W+ I
Sbjct: 129 EYIDRMSKMPHDSNEGPILKAWLDI 153

>dbj|BAC26695.1| unnamed protein product [Mus musculus]
          Length = 1314

 Score = 83.6 bits (205), Expect = 3e-15
 Identities = 46/146 (31%), Positives = 76/146 (51%)
 Frame = +2

Query: 248 VLALVHYYAREGYFRHVQTVCNEVLKKRPGDGVLTFWRAYGLLMEGNTADAMRDLSSIQG 427
           ++A + YY++E YF HV    N  L++   D  L F+RAYG+L E +  DA+ +L  IQ 
Sbjct: 8   LMASIIYYSQEKYFHHVLQAANVGLERYSSDPALQFFRAYGILGEDHIHDAISELEGIQS 67

Query: 428 NSDLELAVAAAQLLGHESAKVPDHDAIIDLQAKLEIEERTASDQPCLHLASFYLYTKSKE 607
           + D  L    A L  H+S    D +A+ +L++ L+   R+AS     + + F  +    +
Sbjct: 68  HPDTSLCAVIALLSAHKSCDTIDIEAVQELESSLKEIRRSASSTALYYASLFLWFMGHHD 127

Query: 608 RARGLVERVLRNQPDMVPAQVLLGWI 685
           +AR  V+ +L+         VL GW+
Sbjct: 128 KAREYVDHMLKVSSGSKEGYVLKGWV 153

>ref|XP_135216.1| RIKEN cDNA 4921538N17 [Mus musculus]
          Length = 1314

 Score = 83.6 bits (205), Expect = 3e-15
 Identities = 46/146 (31%), Positives = 76/146 (51%)
 Frame = +2

Query: 248 VLALVHYYAREGYFRHVQTVCNEVLKKRPGDGVLTFWRAYGLLMEGNTADAMRDLSSIQG 427
           ++A + YY++E YF HV    N  L++   D  L F+RAYG+L E +  DA+ +L  IQ 
Sbjct: 8   LMASIIYYSQEKYFHHVLQAANVGLERYSSDPALQFFRAYGILGEDHIHDAISELEGIQS 67

Query: 428 NSDLELAVAAAQLLGHESAKVPDHDAIIDLQAKLEIEERTASDQPCLHLASFYLYTKSKE 607
           + D  L    A L  H+S    D +A+ +L++ L+   R+AS     + + F  +    +
Sbjct: 68  HPDTSLCAVIALLSAHKSCDTIDIEAVQELESSLKEIRRSASSTALYYASLFLWFMGHHD 127

Query: 608 RARGLVERVLRNQPDMVPAQVLLGWI 685
           +AR  V+ +L+         VL GW+
Sbjct: 128 KAREYVDHMLKVSSGSKEGYVLKGWV 153



EST assemble image


clone accession position
1 HCL031e11_r AV641320 1 510
2 CL63b06_r AV396532 151 693




Chlamydomonas reinhardtii
Kazusa DNA Research Institute