KCC000722A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC000722A_C01 KCC000722A_c01
cttaactaccgcctccagcaagaactatgcagcccgaacgcgttgaccggcttcacatcc
tgacaactgaaccctgatttGAATCGAGTCCACAACAAGCAATAAAACTGGAGGAGCTGC
CTAGCTCCCCTGAGCACTCGCGAAAGGCGCTACTCTGGACGCCGCTTTCGGAGAGGGGCG
ACGGCCATCGTCACGACGCCGACTCACGCGGGCGCCAGTACAAAAAGCAAGGTGGACTCC
GAGGCTTCATTGGAAAAATGACAGCAGGGCCTCCCGAGTTCCTTAAGGCCTGCTTGGGGT
TCTGCTGGGGGCCCTTGGACGCGGTGCCGCCAAGCGCGAAGAAGCCGGCAACTAAGCCAG
CAGAGAAGGTGGAGGCGCAGAAGGTCGAGCGGAAAGCCACTTGGCGCAACAGCCCTCTGG
TGCAGCAGTACAACCTCATCAAGCAGATTGGAAAGGGCGGCTTCAGTGAAATTTGGCTGG
GCGAGCACAAGGAGAGCGGGCAGCAGGTGGCGGTCAAAGTTGTGGACCTGAAGAATGAGG
ACCTGGAGCAGAGTGAGATTGCAAACCTGATTGCGGAGGCCAAGTTCCTTCGGACCATGG
ACTGCCCCTTCCTGCTCAAGTGCCTTGAAACCGCACAAGATGACGATTGGCTGGTTCTCA
TCCTGGAGTATCTGTCGGGCGGAGAGATGCTCGAGCACCTGCACAAGGTGAAGAAGTACA
CGGAGGTGGAGGCGGCAAAGCTCTTCGCGCAGGTGGTGTCGGCCATCTCCTACCTGCACA
ACCTCAACTTGATGCACCGCGATATCAAGCCCGAGAACGTCATGTTCACACATCCGGTGG
AGGCGTTTGAGGCCGATGGCAAGCCGCTGCGAGTGAAAGTCATCGACATGGGCATGTCAG
CGCTCTTTGACCCAAACAAGGAGGTGCGGGGCTGCATTGGCACGCCAGGGTTTGTGTCAC
CAGAGATTTGGAACGATGCGCCGCACATGCCCTCCGGCGACGTGTACACGCTGGGGGTGA
TGCTCTTCATCATGCTGACCGG


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC000722A_C01 KCC000722A_c01
         (1042 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_496679.1| serine threonine kinase (2M829) [Caenorhabditis...   139  1e-31
emb|CAB04433.2| Hypothetical protein F49C5.4 [Caenorhabditis ele...   139  1e-31
gb|AAM73857.1|AF457198_1 putative serine/threonine protein kinas...   134  3e-30
gb|AAM73860.1|AF457201_1 putative serine/threonine protein kinas...   134  3e-30
gb|AAM73861.1|AF457202_1 putative serine/threonine protein kinas...   134  3e-30

>ref|NP_496679.1| serine threonine kinase (2M829) [Caenorhabditis elegans]
            gi|7503817|pir||T22427 hypothetical protein F49C5.4 -
            Caenorhabditis elegans
          Length = 334

 Score =  139 bits (349), Expect = 1e-31
 Identities = 77/204 (37%), Positives = 124/204 (60%), Gaps = 1/204 (0%)
 Frame = +3

Query: 429  YNLIKQIGKGGFSEIWLGEHKESGQQVAVKVVDLKNEDLEQSEIANLIAEAKFLRTMDCP 608
            Y L K++G G FS++ LG H+ + ++VAVK++D    D +  ++  L  E + +  M+ P
Sbjct: 49   YRLGKELGAGNFSKVKLGVHQLTKEKVAVKIMDKAKMDAKAQKL--LSREIQAMEEMNHP 106

Query: 609  FLLKCLETAQDDDWLVLILEYLSGGEMLEHLHKVKKYTEVEAAKLFAQVVSAISYLHNLN 788
             ++K  E  +    + L++EY SGGE+  ++H+  K TE +A  LFAQ+VSA+S++H+ N
Sbjct: 107  NIVKLFEVVETLTRVHLVIEYASGGELYTYVHERGKLTEGDAKPLFAQIVSAVSHMHSRN 166

Query: 789  LMHRDIKPENVMFTHPVEAFEADGKPLRVKVIDMGMSALFDPNKEVRGCIGTPGFVSPEI 968
            ++HRDIK ENVMF+           P  VK++D G S L D  + +R   G+P + +PE+
Sbjct: 167  IVHRDIKAENVMFS----------SPNTVKLVDFGFSCLVDREQMLRTFCGSPPYAAPEL 216

Query: 969  WNDAPHMPS-GDVYTLGVMLFIML 1037
            + D  +     DV+ LGV+LF ML
Sbjct: 217  FQDTSYAGELVDVWALGVLLFFML 240

>emb|CAB04433.2| Hypothetical protein F49C5.4 [Caenorhabditis elegans]
          Length = 318

 Score =  139 bits (349), Expect = 1e-31
 Identities = 77/204 (37%), Positives = 124/204 (60%), Gaps = 1/204 (0%)
 Frame = +3

Query: 429  YNLIKQIGKGGFSEIWLGEHKESGQQVAVKVVDLKNEDLEQSEIANLIAEAKFLRTMDCP 608
            Y L K++G G FS++ LG H+ + ++VAVK++D    D +  ++  L  E + +  M+ P
Sbjct: 33   YRLGKELGAGNFSKVKLGVHQLTKEKVAVKIMDKAKMDAKAQKL--LSREIQAMEEMNHP 90

Query: 609  FLLKCLETAQDDDWLVLILEYLSGGEMLEHLHKVKKYTEVEAAKLFAQVVSAISYLHNLN 788
             ++K  E  +    + L++EY SGGE+  ++H+  K TE +A  LFAQ+VSA+S++H+ N
Sbjct: 91   NIVKLFEVVETLTRVHLVIEYASGGELYTYVHERGKLTEGDAKPLFAQIVSAVSHMHSRN 150

Query: 789  LMHRDIKPENVMFTHPVEAFEADGKPLRVKVIDMGMSALFDPNKEVRGCIGTPGFVSPEI 968
            ++HRDIK ENVMF+           P  VK++D G S L D  + +R   G+P + +PE+
Sbjct: 151  IVHRDIKAENVMFS----------SPNTVKLVDFGFSCLVDREQMLRTFCGSPPYAAPEL 200

Query: 969  WNDAPHMPS-GDVYTLGVMLFIML 1037
            + D  +     DV+ LGV+LF ML
Sbjct: 201  FQDTSYAGELVDVWALGVLLFFML 224

>gb|AAM73857.1|AF457198_1 putative serine/threonine protein kinase; HcSTK [Haemonchus
            contortus]
          Length = 444

 Score =  134 bits (337), Expect = 3e-30
 Identities = 72/212 (33%), Positives = 126/212 (58%), Gaps = 1/212 (0%)
 Frame = +3

Query: 408  NSPLVQQYNLIKQIGKGGFSEIWLGEHKESGQQVAVKVVDLKNEDLEQSEIANLIAEAKF 587
            + P V +Y L+K IGKG F+++ L +H  +GQ+VA+K++D     L  S +  L  E K 
Sbjct: 117  DDPHVGKYKLLKTIGKGNFAKVKLAKHTITGQEVAIKIID--KTALNPSSLQKLFREVKI 174

Query: 588  LRTMDCPFLLKCLETAQDDDWLVLILEYLSGGEMLEHLHKVKKYTEVEAAKLFAQVVSAI 767
            ++ +D P ++K  +  +++  L L+LEY SGGE+ ++L    +  E EA   F Q+VSA+
Sbjct: 175  MKQLDHPNIVKLYQVMENEQTLYLVLEYASGGEVFDYLVAHGRMKEKEARVKFRQIVSAV 234

Query: 768  SYLHNLNLMHRDIKPENVMFTHPVEAFEADGKPLRVKVIDMGMSALFDPNKEVRGCIGTP 947
             YLH+ N++HRD+K EN++        +AD   + +K+ D G S  F    ++    G+P
Sbjct: 235  QYLHSKNIIHRDLKAENLL-------LDAD---MNIKIADFGFSNQFTLGNKLDTFCGSP 284

Query: 948  GFVSPEIWNDAPH-MPSGDVYTLGVMLFIMLT 1040
             + +PE++    +  P  DV++LGV+L+ +++
Sbjct: 285  PYAAPELFQGKKYDGPEVDVWSLGVILYTLVS 316

>gb|AAM73860.1|AF457201_1 putative serine/threonine protein kinase; HcSTK [Haemonchus
            contortus]
          Length = 834

 Score =  134 bits (337), Expect = 3e-30
 Identities = 72/212 (33%), Positives = 126/212 (58%), Gaps = 1/212 (0%)
 Frame = +3

Query: 408  NSPLVQQYNLIKQIGKGGFSEIWLGEHKESGQQVAVKVVDLKNEDLEQSEIANLIAEAKF 587
            + P V +Y L+K IGKG F+++ L +H  +GQ+VA+K++D     L  S +  L  E K 
Sbjct: 46   DDPHVGKYKLLKTIGKGNFAKVKLAKHTITGQEVAIKIID--KTALNPSSLQKLFREVKI 103

Query: 588  LRTMDCPFLLKCLETAQDDDWLVLILEYLSGGEMLEHLHKVKKYTEVEAAKLFAQVVSAI 767
            ++ +D P ++K  +  +++  L L+LEY SGGE+ ++L    +  E EA   F Q+VSA+
Sbjct: 104  MKQLDHPNIVKLYQVMENEQTLYLVLEYASGGEVFDYLVAHGRMKEKEARVKFRQIVSAV 163

Query: 768  SYLHNLNLMHRDIKPENVMFTHPVEAFEADGKPLRVKVIDMGMSALFDPNKEVRGCIGTP 947
             YLH+ N++HRD+K EN++        +AD   + +K+ D G S  F    ++    G+P
Sbjct: 164  QYLHSKNIIHRDLKAENLL-------LDAD---MNIKIADFGFSNQFTLGNKLDTFCGSP 213

Query: 948  GFVSPEIWNDAPH-MPSGDVYTLGVMLFIMLT 1040
             + +PE++    +  P  DV++LGV+L+ +++
Sbjct: 214  PYAAPELFQGKKYDGPEVDVWSLGVILYTLVS 245

>gb|AAM73861.1|AF457202_1 putative serine/threonine protein kinase; HcSTK [Haemonchus
            contortus]
          Length = 1066

 Score =  134 bits (337), Expect = 3e-30
 Identities = 72/212 (33%), Positives = 126/212 (58%), Gaps = 1/212 (0%)
 Frame = +3

Query: 408  NSPLVQQYNLIKQIGKGGFSEIWLGEHKESGQQVAVKVVDLKNEDLEQSEIANLIAEAKF 587
            + P V +Y L+K IGKG F+++ L +H  +GQ+VA+K++D     L  S +  L  E K 
Sbjct: 115  DDPHVGKYKLLKTIGKGNFAKVKLAKHTITGQEVAIKIID--KTALNPSSLQKLFREVKI 172

Query: 588  LRTMDCPFLLKCLETAQDDDWLVLILEYLSGGEMLEHLHKVKKYTEVEAAKLFAQVVSAI 767
            ++ +D P ++K  +  +++  L L+LEY SGGE+ ++L    +  E EA   F Q+VSA+
Sbjct: 173  MKQLDHPNIVKLYQVMENEQTLYLVLEYASGGEVFDYLVAHGRMKEKEARVKFRQIVSAV 232

Query: 768  SYLHNLNLMHRDIKPENVMFTHPVEAFEADGKPLRVKVIDMGMSALFDPNKEVRGCIGTP 947
             YLH+ N++HRD+K EN++        +AD   + +K+ D G S  F    ++    G+P
Sbjct: 233  QYLHSKNIIHRDLKAENLL-------LDAD---MNIKIADFGFSNQFTLGNKLDTFCGSP 282

Query: 948  GFVSPEIWNDAPH-MPSGDVYTLGVMLFIMLT 1040
             + +PE++    +  P  DV++LGV+L+ +++
Sbjct: 283  PYAAPELFQGKKYDGPEVDVWSLGVILYTLVS 314



EST assemble image


clone accession position
1 HCL051a02_r AV642388 1 489
2 CL58a01_r AV396186 282 815
3 CL73c06_r AV396997 408 840
4 HCL035g02_r AV641534 507 889
5 LCL076b12_r AV630257 582 1041
6 HCL022b01_r AV640769 672 1044




Chlamydomonas reinhardtii
Kazusa DNA Research Institute