KCC000721A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC000721A_C01 KCC000721A_c01
TTGTGGGCTGCTCTTATTGAAGCGCCTAACAAGTGTCTGTCCTGAAAATCCCGGCAAAAT
CATCCTACAACACCGCGAGCTCGCTTAGTCGCACAAGGCAACTGAATCTTAAGGATACGA
CTCGCGCTACGCTTCGCGACTAATTCTGGTCGTTTTGTGACGAGAACGCACGCCGCGAGT
TGACAACATCCGCGCCCATCACCACCGTGCCTTAACTCCCTGGACCCTCTGGACAAGCAT
TTATGGCTGCGTCAATGAAATGGCACCTGCCCGGCCGGGCCCAAGTGCAGCAGCGTCAGC
GGAGTGTCGTCTCTGCTGGCTGGCAGACAGTCCGTGATGTGGTGCGCGCCTCTGCTTCGG
GCGGCAGCGCGGCTGTCACGGCCGGATCTCTCAAGGCCGCCGCGACCGCCCGTGGCGCGG
CGCTGGTCGCGCGCTACGCCACCTCCACGCCCGCCACATCGACCACGCTGCCGCTGGACG
GCCCCGCCCTGACCGTGCGCACACGTGTGGTGGTGCCGTACCACCCCACCAGCCACGGCC
AGCAGCTGGTGCTGGTGGGCAGCTGCGAGGAGCTTGGCAACTGGGACCCCAAAAAGGGCG
TCAAGTTCACCTGGTGCGAGGGCCACAGTCACGAGGTGGAGCTGGAGCTGCCGGTGCACA
CCAACGTGGCGTGCAAGCTGGTGGTGCTGGGAGAGAACGACAGCAGCTCCTGGGAGCCGG
AGGCCAACCGTGAGCTGCTGCTGGCGCCGGCCTCGCTGGCCAGCCGCGCCGCCGGCTACA
CCATGCTCATGCACTGGGGCT


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC000721A_C01 KCC000721A_c01
         (801 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

gb|AAP04499.1| glucoamylase [Aspergillus niger]                        64  4e-09
sp|P04064|AMYG_ASPNG Glucoamylase G1 and G2 precursor (Glucan 1,...    62  8e-09
sp|P22832|AMYG_ASPSH GLUCOAMYLASE PRECURSOR (GLUCAN 1,4-ALPHA-GL...    62  8e-09
prf||1008149A glucoamylase G1                                          62  8e-09
prf||1508161A glucoamylase I                                           61  2e-08

>gb|AAP04499.1| glucoamylase [Aspergillus niger]
          Length = 639

 Score = 63.5 bits (153), Expect = 4e-09
 Identities = 63/248 (25%), Positives = 104/248 (41%), Gaps = 14/248 (5%)
 Frame = +3

Query: 69   NTASSLSRTRQLNLKDTTRATLRD*FWSFC---DENARRELTTSAPI--TTVP*LPGPSG 233
            + AS+ S + Q +  D  + + RD  WS+      N RR +  SA    T+   +PG   
Sbjct: 414  HAASNGSMSEQYDKSDGEQLSARDLTWSYAALLTANNRRNVVPSASWGETSASSVPGTCA 473

Query: 234  QAFMAASMKWHLPGRAQVQQRQRSVVSAGWQTVRDVVRASASGGSA--AVTAGSLKAAAT 407
                  +                SV    W ++       A+GG+   A   GS    +T
Sbjct: 474  ATSAIGTYS--------------SVTVTSWPSI------VATGGTTTTATPTGSGSVTST 513

Query: 408  ARGAALVARYATSTPATSTTLPLDGPALTVRTRVVVPYH---PTSHGQQLVLVGSCEELG 578
            ++  A  ++ +TST +TS T P         T V V +     T++G+ + LVGS  +LG
Sbjct: 514  SKTTATASKTSTSTSSTSCTTP---------TAVAVTFDLTATTTYGENIYLVGSISQLG 564

Query: 579  NWDPKKGVKFTWCEGHSHE----VELELPVHTNVACKLVVLGENDSSSWEPEANRELLLA 746
            +W+   G+  +  +  S +    V + LP   +   K + +  +DS  WE + NRE  + 
Sbjct: 565  DWETSDGIALSADKYTSSDPLWYVTVTLPAGESFEYKFIRIESDDSVEWESDPNREYTVP 624

Query: 747  PASLASRA 770
             A   S A
Sbjct: 625  QACGTSTA 632

>sp|P04064|AMYG_ASPNG Glucoamylase G1 and G2 precursor (Glucan 1,4-alpha-glucosidase)
            (1,4-alpha-D-glucan glucohydrolase) gi|67393|pir||ALASGR
            glucan 1,4-alpha-glucosidase (EC 3.2.1.3) precursor -
            Aspergillus niger gi|83649|pir||A29166 glucan
            1,4-alpha-glucosidase (EC 3.2.1.3) precursor -
            Aspergillus awamori gi|2343|emb|CAA25303.1|
            preproglucoamylase G1 [Aspergillus niger]
            gi|166505|gb|AAB59296.1| preproglucoamylase G1
            gi|732556|emb|CAA25219.1| glucoamylase G1 [Aspergillus
            niger]
          Length = 640

 Score = 62.4 bits (150), Expect = 8e-09
 Identities = 54/212 (25%), Positives = 85/212 (39%), Gaps = 32/212 (15%)
 Frame = +3

Query: 231  GQAFMAASMKWHLPGRAQVQQRQRSVVSAGWQ-----------------------TVRDV 341
            G+   A  + W          R+ SVV A W                        TV   
Sbjct: 431  GEQLSARDLTWSYAALLTANNRRNSVVPASWGETSASSVPGTCAATSAIGTYSSVTVTSW 490

Query: 342  VRASASGGSA--AVTAGSLKAAATARGAALVARYATSTPATSTTLPLDGPALTVRTRVVV 515
                A+GG+   A   GS    +T++  A  ++ +TST +TS T P         T V V
Sbjct: 491  PSIVATGGTTTTATPTGSGSVTSTSKTTATASKTSTSTSSTSCTTP---------TAVAV 541

Query: 516  PYH---PTSHGQQLVLVGSCEELGNWDPKKGVKFTWCEGHSHE----VELELPVHTNVAC 674
             +     T++G+ + LVGS  +LG+W+   G+  +  +  S +    V + LP   +   
Sbjct: 542  TFDLTATTTYGENIYLVGSISQLGDWETSDGIALSADKYTSSDPLWYVTVTLPAGESFEY 601

Query: 675  KLVVLGENDSSSWEPEANRELLLAPASLASRA 770
            K + +  +DS  WE + NRE  +  A   S A
Sbjct: 602  KFIRIESDDSVEWESDPNREYTVPQACGTSTA 633

>sp|P22832|AMYG_ASPSH GLUCOAMYLASE PRECURSOR (GLUCAN 1,4-ALPHA-GLUCOSIDASE)
            (1,4-ALPHA-D-GLUCAN GLUCOHYDROLASE) gi|83686|pir||JQ0607
            glucan 1,4-alpha-glucosidase (EC 3.2.1.3) precursor -
            Aspergillus sp gi|217817|dbj|BAA01254.1| glucoamylase
            [Aspergillus shirousami]
          Length = 639

 Score = 62.4 bits (150), Expect = 8e-09
 Identities = 49/203 (24%), Positives = 80/203 (39%), Gaps = 23/203 (11%)
 Frame = +3

Query: 231  GQAFMAASMKWHLPGRAQVQQRQRSVVSAGW-----QTVRDVVRASASGG---------- 365
            G    A  + W          R+ SVV   W      +V     A+++ G          
Sbjct: 430  GDELSARDLTWSYAALLTANNRRNSVVPPSWGETSASSVPGTCAATSASGTYSSVTVTSW 489

Query: 366  -SAAVTAGSLKAAATARGAALVARYATSTPATSTTLPLDGPALTVRTRVVVPYH---PTS 533
             S   T G+   A T     + +   T+T A+ T+      + T  T V V +     T+
Sbjct: 490  PSIVATGGTTTTATTTGSGGVTSTSKTTTTASKTSTTTSSTSCTTPTAVAVTFDLTATTT 549

Query: 534  HGQQLVLVGSCEELGNWDPKKGVKFTWCEGHSHE----VELELPVHTNVACKLVVLGEND 701
            +G+ + LVGS  +LG+W+   G+  +  +  S      V + LP   +   K + +  +D
Sbjct: 550  YGENIYLVGSISQLGDWETSDGIALSADKYTSSNPPWYVTVTLPAGESFEYKFIRVESDD 609

Query: 702  SSSWEPEANRELLLAPASLASRA 770
            S  WE + NRE  +  A   S A
Sbjct: 610  SVEWESDPNREYTVPQACGESTA 632

>prf||1008149A glucoamylase G1
          Length = 614

 Score = 62.4 bits (150), Expect = 8e-09
 Identities = 54/212 (25%), Positives = 85/212 (39%), Gaps = 32/212 (15%)
 Frame = +3

Query: 231  GQAFMAASMKWHLPGRAQVQQRQRSVVSAGWQ-----------------------TVRDV 341
            G+   A  + W          R+ SVV A W                        TV   
Sbjct: 405  GEQLSARDLTWSYAALLTANNRRNSVVPASWGETSASSVPGTCAATSAIGTYSSVTVTSW 464

Query: 342  VRASASGGSA--AVTAGSLKAAATARGAALVARYATSTPATSTTLPLDGPALTVRTRVVV 515
                A+GG+   A   GS    +T++  A  ++ +TST +TS T P         T V V
Sbjct: 465  PSIVATGGTTTTATPTGSGSVTSTSKTTATASKTSTSTSSTSCTTP---------TAVAV 515

Query: 516  PYH---PTSHGQQLVLVGSCEELGNWDPKKGVKFTWCEGHSHE----VELELPVHTNVAC 674
             +     T++G+ + LVGS  +LG+W+   G+  +  +  S +    V + LP   +   
Sbjct: 516  TFDLTATTTYGENIYLVGSISQLGDWETSDGIALSADKYTSSDPLWYVTVTLPAGESFEY 575

Query: 675  KLVVLGENDSSSWEPEANRELLLAPASLASRA 770
            K + +  +DS  WE + NRE  +  A   S A
Sbjct: 576  KFIRIESDDSVEWESDPNREYTVPQACGTSTA 607

>prf||1508161A glucoamylase I
          Length = 640

 Score = 61.2 bits (147), Expect = 2e-08
 Identities = 50/203 (24%), Positives = 79/203 (38%), Gaps = 23/203 (11%)
 Frame = +3

Query: 231  GQAFMAASMKWHLPGRAQVQQRQRSVVSAGWQTVR------DVVRASASGGSAAVTA--- 383
            G    A  + W          R+ SVV   W               SASG  ++VT    
Sbjct: 431  GDELSARDLTWSYAALLTANNRRNSVVPPSWGETSASSWPGTCAATSASGTYSSVTVTSW 490

Query: 384  -------GSLKAAATARGAALVARYATSTPATSTTLPLDGPALTVRTRVVVPYH---PTS 533
                   G+   A T     + +   T+T A+ T+      + T  T V V +     T+
Sbjct: 491  PSIVATGGTTTTATTTGSGGVTSTSKTTTTASKTSTTTSSTSCTTPTAVAVTFDLTATTT 550

Query: 534  HGQQLVLVGSCEELGNWDPKKGVKFTWCEGHSHE----VELELPVHTNVACKLVVLGEND 701
            +G+ + LVGS  +LG+W+   G+  +  +  S      V + LP   +   K + +  +D
Sbjct: 551  YGENIYLVGSISQLGDWETSDGIALSADKYTSSNPLWYVTVTLPAGESFEYKFIRVESDD 610

Query: 702  SSSWEPEANRELLLAPASLASRA 770
            S  WE + NRE  +  A   S A
Sbjct: 611  SVEWESDPNREYTVPQACGESTA 633



EST assemble image


clone accession position
1 MXL085g04_r BP098038 1 430
2 LCL077g12_r AV630363 21 529
3 LCL027f04_r AV627497 21 440
4 LCL090b12_r AV631205 23 269
5 MXL013f10_r BP093781 27 391
6 LCL022b06_r AV627169 28 361
7 MXL068f12_r BP097014 28 392
8 LCL050h08_r AV629048 31 370
9 MXL008f08_r BP093458 31 313
10 MXL005d04_r BP093231 31 462
11 LCL086f11_r AV630945 31 400
12 HCL086d08_r AV644327 32 508
13 MXL052g04_r BP096104 33 431
14 MXL091c09_r BP098311 33 406
15 MXL060g11_r BP096563 33 494
16 MXL028f04_r BP094744 36 295
17 CL73a11_r AV396961 37 558
18 MXL089d12_r BP098213 38 474
19 MXL086f02_r BP098078 38 403
20 CL57h05_r AV396256 40 582
21 HCL046a08_r AV642127 42 515
22 MXL065d08_r BP096819 43 444
23 HCL048g03_r AV642269 75 370
24 LCL083a06_r AV630709 126 567
25 LCL076g12_r AV630295 143 463
26 MXL022d04_r BP094387 144 557
27 LCL032e12_r AV627824 155 618
28 HCL030b12_r AV641232 158 526
29 HCL034b10_r AV641471 165 688
30 MXL096c03_r BP098610 177 556
31 MXL096c12_r BP098616 178 633
32 LCL063a11_r AV629665 251 682
33 MXL099h12_r BP098835 319 687
34 LCL092f03_r AV631360 424 700
35 LCL079e05_r AV630481 535 729
36 LCL016a01_r AV626819 539 687
37 LCL007g06_r AV626358 560 822




Chlamydomonas reinhardtii
Kazusa DNA Research Institute