Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC000692A_C01 KCC000692A_c01
(427 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_216317.2| similar to RPE-spondin [Rattus norvegicus] 35 0.24
gb|AAL55848.1|AF318341_1 unknown [Homo sapiens] 35 0.31
ref|NP_112250.1| thyroglobulin [Rattus norvegicus] gi|12643975|s... 34 0.54
gb|AAF34909.1| thyroglobulin [Rattus norvegicus] 34 0.54
ref|ZP_00014800.1| COG0683: ABC-type branched-chain amino acid t... 34 0.54
>ref|XP_216317.2| similar to RPE-spondin [Rattus norvegicus]
Length = 363
Score = 35.0 bits (79), Expect = 0.24
Identities = 22/62 (35%), Positives = 25/62 (39%), Gaps = 10/62 (16%)
Frame = +1
Query: 217 FWLIKTYGYRHVGKRFASTMPSCTSRAGATRARPGR----------ASAARRRSGAVQQH 366
FW + G +GK S RAGATR RPG A AAR R G +
Sbjct: 11 FWSLMDQGLGELGKSLEKASESFLERAGATRGRPGAQGLRFSDDFPARAARGRCGRAEGR 70
Query: 367 SR 372
R
Sbjct: 71 GR 72
>gb|AAL55848.1|AF318341_1 unknown [Homo sapiens]
Length = 103
Score = 34.7 bits (78), Expect = 0.31
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = -1
Query: 403 ACCWRSWRGVCGCVVEQPPSGGERRW 326
+CCWR+WRG CG P RRW
Sbjct: 36 SCCWRAWRGCCG--TSWPCEPWRRRW 59
>ref|NP_112250.1| thyroglobulin [Rattus norvegicus] gi|12643975|sp|P06882|THYG_RAT
Thyroglobulin precursor gi|8096462|dbj|BAA96132.1|
thyroglobulin [Rattus norvegicus]
Length = 2768
Score = 33.9 bits (76), Expect = 0.54
Identities = 27/94 (28%), Positives = 40/94 (41%), Gaps = 3/94 (3%)
Frame = +1
Query: 19 AWIPEVHSTYAVELSEPAISVCPTLLRTIIKPVRSIISCKISTEFTLVCTA---PWADRN 189
AW + S V + + + CP L + V +S K+ +T VC A ++
Sbjct: 1125 AWCVDPSSGEGVPTNTNSSAQCPGLCDALKSRV---LSRKVGLGYTPVCEALDGGFSPVQ 1181
Query: 190 CK*ELAVGSFWLIKTYGYRHVGKRFASTMPSCTS 291
C +LA GS W + G G R T P+C S
Sbjct: 1182 C--DLAQGSCWCVLASGEEVPGTRVVGTQPACES 1213
>gb|AAF34909.1| thyroglobulin [Rattus norvegicus]
Length = 2768
Score = 33.9 bits (76), Expect = 0.54
Identities = 27/94 (28%), Positives = 40/94 (41%), Gaps = 3/94 (3%)
Frame = +1
Query: 19 AWIPEVHSTYAVELSEPAISVCPTLLRTIIKPVRSIISCKISTEFTLVCTA---PWADRN 189
AW + S V + + + CP L + V +S K+ +T VC A ++
Sbjct: 1125 AWCVDPSSGEGVPTNTNSSAQCPGLCDALKSRV---LSRKVGLGYTPVCEALDGGFSPVQ 1181
Query: 190 CK*ELAVGSFWLIKTYGYRHVGKRFASTMPSCTS 291
C +LA GS W + G G R T P+C S
Sbjct: 1182 C--DLAQGSCWCVLASGEEVPGTRVVGTQPACES 1213
>ref|ZP_00014800.1| COG0683: ABC-type branched-chain amino acid transport systems,
periplasmic component [Rhodospirillum rubrum]
Length = 334
Score = 33.9 bits (76), Expect = 0.54
Identities = 21/45 (46%), Positives = 25/45 (54%), Gaps = 2/45 (4%)
Frame = -2
Query: 402 LVAG--VAGVAFAAVLLNSPRAAASGAGPPRPSPRRASPRGTRRH 274
+VAG VAG+A AA +PR +S PP P P RA G RH
Sbjct: 13 MVAGLVVAGLALAAC---APRFPSSAPPPPGPPPARAEGSGAERH 54
