Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC000683A_C01 KCC000683A_c01
(1318 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|P12356|PSAF_CHLRE PHOTOSYSTEM I REACTION CENTRE SUBUNIT III P... 296 7e-79
sp|P46486|PSAF_FLATR Photosystem I reaction centre subunit III, ... 169 1e-40
gb|AAD27880.2|AF139468_1 photosystem I reaction center subunit I... 168 2e-40
sp|P12355|PSAF_SPIOL Photosystem I reaction centre subunit III, ... 166 1e-39
gb|AAP03872.1| putative photosystem I subunit III precursor [Nic... 164 2e-39
>sp|P12356|PSAF_CHLRE PHOTOSYSTEM I REACTION CENTRE SUBUNIT III PRECURSOR
(LIGHT-HARVESTING COMPLEX I 17 KDA PROTEIN) (PSI-F) (P21
PROTEIN) gi|81244|pir||S04133 photosystem I chain III
precursor - Chlamydomonas reinhardtii
gi|18184|emb|CAA31849.1| P21 precursor protein
[Chlamydomonas reinhardtii]
gi|4689368|gb|AAD27871.1|AF135791_1 photosystem I
subunit F precursor [Chlamydomonas reinhardtii]
gi|226938|prf||1611462A photosystem I protein P21
Length = 227
Score = 296 bits (757), Expect = 7e-79
Identities = 150/167 (89%), Positives = 153/167 (90%)
Frame = +2
Query: 200 ADIAGLTPCSESKGLRPSWRRRS*RPWRSGLKQYEADSAPAVALKATMERTKARFANYAK 379
ADIAGLTPCSESK ++ + LKQYEADSAPAVALKATMERTKARFANYAK
Sbjct: 62 ADIAGLTPCSESKAYA-KLEKKELKTLEKRLKQYEADSAPAVALKATMERTKARFANYAK 120
Query: 380 AGLLCGNDGLPHLIADPGLALKYGHAGEVFIPTFGFLYVAGYIGYVGRQYLIAVKGEAKP 559
AGLLCGNDGLPHLIADPGLALKYGHAGEVFIPTFGFLYVAGYIGYVGRQYLIAVKGEAKP
Sbjct: 121 AGLLCGNDGLPHLIADPGLALKYGHAGEVFIPTFGFLYVAGYIGYVGRQYLIAVKGEAKP 180
Query: 560 TDKEIIIDVPLATKLAWQGAGWPLAAVQELQRGTLLEKEENITVSPR 700
TDKEIIIDVPLATKLAWQGAGWPLAAVQELQRGTLLEKEENITVSPR
Sbjct: 181 TDKEIIIDVPLATKLAWQGAGWPLAAVQELQRGTLLEKEENITVSPR 227
Score = 109 bits (273), Expect = 9e-23
Identities = 62/79 (78%), Positives = 66/79 (83%)
Frame = +3
Query: 15 MALTMRNPAVKASSRVAPSSRRALRVACQAQKNETASKVGTALAASALAAAVSLSAPSGG 194
MALTMRNPAVKASSRVAPSSRRALRVACQAQKNETASKVGTALAASALAAAVSLSAPS
Sbjct: 1 MALTMRNPAVKASSRVAPSSRRALRVACQAQKNETASKVGTALAASALAAAVSLSAPSAA 60
Query: 195 DGPTSRA*PPAPRARAYAQ 251
+ P ++AYA+
Sbjct: 61 MADIAGL-TPCSESKAYAK 78
>sp|P46486|PSAF_FLATR Photosystem I reaction centre subunit III, chloroplast precursor
(Light-harvesting complex I 17 kDa protein) (PSI-F)
gi|419791|pir||S31165 photosystem I chain III precursor
- Flaveria trinervia gi|168173|gb|AAA33344.1|
photosystem I subunit III gi|298482|gb|AAB25669.1|
photosystem I reaction center subunit III, PSI-RC PsaF
[Flaveria trinervia, Peptide, 232 aa]
Length = 232
Score = 169 bits (428), Expect = 1e-40
Identities = 89/157 (56%), Positives = 108/157 (68%)
Frame = +2
Query: 200 ADIAGLTPCSESKGLRPSWRRRS*RPWRSGLKQYEADSAPAVALKATMERTKARFANYAK 379
ADI+GLTPC ESK ++S + S LK Y DSAPA+A+KATME+TK RF NY K
Sbjct: 78 ADISGLTPCKESKQFAKR-EKQSLKKLESSLKLYAPDSAPALAIKATMEKTKRRFDNYGK 136
Query: 380 AGLLCGNDGLPHLIADPGLALKYGHAGEVFIPTFGFLYVAGYIGYVGRQYLIAVKGEAKP 559
GLLCG+DGLPHLI H GE P FLY+AG+IG+VGR YLIA++ E KP
Sbjct: 137 QGLLCGSDGLPHLIVSGDQR----HWGEFITPGILFLYIAGWIGWVGRSYLIAIRDEKKP 192
Query: 560 TDKEIIIDVPLATKLAWQGAGWPLAAVQELQRGTLLE 670
T KEIIIDVPLATKL ++G WP+AA +E G L++
Sbjct: 193 TQKEIIIDVPLATKLLFRGFSWPVAAYREYLNGELID 229
>gb|AAD27880.2|AF139468_1 photosystem I reaction center subunit III [Vigna radiata]
Length = 223
Score = 168 bits (425), Expect = 2e-40
Identities = 89/159 (55%), Positives = 111/159 (68%)
Frame = +2
Query: 200 ADIAGLTPCSESKGLRPSWRRRS*RPWRSGLKQYEADSAPAVALKATMERTKARFANYAK 379
ADI+GLTPC ESK ++S + S LK Y DSAPA+A+KA++E+TK RF NYAK
Sbjct: 69 ADISGLTPCKESKQFAKR-EKQSIKKLESSLKLYAPDSAPALAIKASVEKTKRRFDNYAK 127
Query: 380 AGLLCGNDGLPHLIADPGLALKYGHAGEVFIPTFGFLYVAGYIGYVGRQYLIAVKGEAKP 559
GLLCG DGLPHLI H GE P F FLY+AG+IG+VGR YLIA++ E KP
Sbjct: 128 QGLLCGADGLPHLIVSGDQR----HWGEFITPGFLFLYIAGWIGWVGRSYLIAIRDEKKP 183
Query: 560 TDKEIIIDVPLATKLAWQGAGWPLAAVQELQRGTLLEKE 676
T KEIIIDVPLA++L ++G WP+AA +EL G L+ K+
Sbjct: 184 TMKEIIIDVPLASRLLFRGFSWPVAAYRELINGDLIAKD 222
>sp|P12355|PSAF_SPIOL Photosystem I reaction centre subunit III, chloroplast precursor
(Light-harvesting complex I 17 kDa protein) (PSI-F)
gi|72681|pir||F1SP3 photosystem I chain III precursor -
spinach gi|21303|emb|CAA31523.1| PSI subunit IV
preprotein (AA -77 to 154) [Spinacia oleracea]
gi|226166|prf||1413236A photosystem I reaction center IV
Length = 231
Score = 166 bits (419), Expect = 1e-39
Identities = 87/157 (55%), Positives = 109/157 (69%)
Frame = +2
Query: 200 ADIAGLTPCSESKGLRPSWRRRS*RPWRSGLKQYEADSAPAVALKATMERTKARFANYAK 379
ADIAGLTPC ESK +++ + ++ LK Y DSAPA+A+KATME+TK RF NY K
Sbjct: 77 ADIAGLTPCKESKQFAKR-EKQALKKLQASLKLYADDSAPALAIKATMEKTKKRFDNYGK 135
Query: 380 AGLLCGNDGLPHLIADPGLALKYGHAGEVFIPTFGFLYVAGYIGYVGRQYLIAVKGEAKP 559
GLLCG+DGLPHLI H GE P FLY+AG+IG+VGR YLIA++ E KP
Sbjct: 136 YGLLCGSDGLPHLIVSGDQR----HWGEFITPGILFLYIAGWIGWVGRSYLIAIRDEKKP 191
Query: 560 TDKEIIIDVPLATKLAWQGAGWPLAAVQELQRGTLLE 670
T KEIIIDVPLA+ L ++G WP+AA +EL G L++
Sbjct: 192 TQKEIIIDVPLASSLLFRGFSWPVAAYRELLNGELVD 228
>gb|AAP03872.1| putative photosystem I subunit III precursor [Nicotiana tabacum]
Length = 222
Score = 164 bits (416), Expect = 2e-39
Identities = 86/157 (54%), Positives = 107/157 (67%)
Frame = +2
Query: 200 ADIAGLTPCSESKGLRPSWRRRS*RPWRSGLKQYEADSAPAVALKATMERTKARFANYAK 379
ADI+GLTPC ESK +++ + S LK Y DSAPA+A++AT+E+TK RF NY K
Sbjct: 68 ADISGLTPCKESKQFAKREKQQI-KKLESSLKLYAPDSAPALAIQATVEKTKRRFDNYGK 126
Query: 380 AGLLCGNDGLPHLIADPGLALKYGHAGEVFIPTFGFLYVAGYIGYVGRQYLIAVKGEAKP 559
GLLCG+DGLPHLI H GE P FLY+AG+IG+VGR YLIAV+ + KP
Sbjct: 127 QGLLCGSDGLPHLIVSGDQR----HWGEFITPGILFLYIAGWIGWVGRSYLIAVRDDKKP 182
Query: 560 TDKEIIIDVPLATKLAWQGAGWPLAAVQELQRGTLLE 670
T KEIIIDVPLA KL W+G WP+AA +E G L++
Sbjct: 183 TMKEIIIDVPLANKLIWRGFSWPVAAYREYLNGELID 219
