Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC000677A_C01 KCC000677A_c01
(518 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_739323.1| conserved hypothetical protein [Corynebacterium... 46 3e-04
gb|AAC33839.1| 2-aminomuconic acid semialdehyde dehydrogenase [P... 43 0.002
pir||JQ0406 hypothetical protein 1246 (uvrA region) - Micrococcu... 40 0.018
ref|ZP_00088573.1| COG3228: Uncharacterized protein conserved in... 40 0.023
gb|AAK49004.1| USC3-5p [Myxococcus xanthus] 39 0.040
>ref|NP_739323.1| conserved hypothetical protein [Corynebacterium efficiens YS-314]
gi|23494557|dbj|BAC19523.1| conserved hypothetical
protein [Corynebacterium efficiens YS-314]
Length = 307
Score = 46.2 bits (108), Expect = 3e-04
Identities = 32/91 (35%), Positives = 41/91 (44%), Gaps = 6/91 (6%)
Frame = +3
Query: 210 PRWPANPPRR--PARTGAGRW---RLVCQW-RGTYTPAAGKQRTSARTSMPSSRRPSRLA 371
P PA P RR P RT W R +C W RG+ TP G+ R + R P+SRR
Sbjct: 9 PSCPAPPARRVYPPRTSVAAWPLSRRLCGWPRGSSTPCPGRTRPTTRCPRPTSRR----- 63
Query: 372 LLAAGPWAAACRADPLTPSSETRARRWTHAT 464
+ P +A R PS A W+ A+
Sbjct: 64 ---SRPAGSASRVSTAPPSPPPTAAGWSTAS 91
>gb|AAC33839.1| 2-aminomuconic acid semialdehyde dehydrogenase [Pseudomonas
pseudoalcaligenes]
Length = 542
Score = 43.1 bits (100), Expect = 0.002
Identities = 43/140 (30%), Positives = 55/140 (38%), Gaps = 4/140 (2%)
Frame = -1
Query: 512 QPHRACCRPGSYR----SQVGCVCPPPRPRFGRRRQWVRSAGRRPRAGCQ*SQPARAP*R 345
+P CRPG R +Q GC RP G QW R+ RR A + + P
Sbjct: 347 RPRAGRCRPGDLRRIPRAQPGC-----RPSPGADSQWPRTVARR--AAAESAGDVGDPGG 399
Query: 344 RHRCPCARPLLSGRGSIGTTPLAHQPPAPSASTRWTSWRVRRPSRSAGVKEGAGPGPRRA 165
R C AR R + G H P T + RV R + +AG GAG G R+
Sbjct: 400 RASCGAAR-----RSAGGAQRGPHVPGGYPLGTAGATRRVHRAAGAAGGAPGAGGGKRQR 454
Query: 164 VRLDAYGATSNSTRSDRRTR 105
G +S R R+R
Sbjct: 455 A-----GLSSRPGRDPPRSR 469
>pir||JQ0406 hypothetical protein 1246 (uvrA region) - Micrococcus luteus
(fragment)
Length = 1246
Score = 40.0 bits (92), Expect = 0.018
Identities = 40/120 (33%), Positives = 52/120 (43%), Gaps = 6/120 (5%)
Frame = -1
Query: 512 QPHRACCRPGSYRSQVGCVCPPPR-PRFGRRRQWVRSAGRRPRAGCQ*SQPARAP*RRHR 336
+PHR G R GC CPP R R GR + R RPR +PAR P R R
Sbjct: 6 RPHRCGRGRGGRR---GCGCPPGRCRRPGRTQAGARGTRARPR-----RRPAR-PGGRGR 56
Query: 335 CPCARPLLSGRGSIGTTPLAHQPPAPSASTRWT-----SWRVRRPSRSAGVKEGAGPGPR 171
P R +GRG P+ + S + +WT +WR+ S++ E GPR
Sbjct: 57 SPRTRRSAAGRGPRRPVPVKYS----SLAKKWTGRGARAWRITE-SKNDRWLEAMTKGPR 111
>ref|ZP_00088573.1| COG3228: Uncharacterized protein conserved in bacteria [Azotobacter
vinelandii]
Length = 488
Score = 39.7 bits (91), Expect = 0.023
Identities = 44/150 (29%), Positives = 56/150 (37%), Gaps = 4/150 (2%)
Frame = -1
Query: 512 QPHRACCRPGSYRSQVGCVCPPPRPRFGRRRQWVRSAGRRPRAGCQ*SQPARAP*RRHRC 333
QPH C RPG P P G RR R+ RR G + + P P RRHR
Sbjct: 44 QPHGQCPRPG----------PDGLPAQGNRRHARRAGHRRLAEGLR-AGPGHGPPRRHR- 91
Query: 332 PCARPLLSGRGSIGTTPLAHQPPAPSASTRWTSWRVRR----PSRSAGVKEGAGPGPRRA 165
RP + L H A +W RR P+ SAG++ +G GPR
Sbjct: 92 ---RPQRPAARRVQPVDLRH-----GAQRHHGAWLHRRHPPGPAGSAGLRR-SGQGPR-- 140
Query: 164 VRLDAYGATSNSTRSDRRTR*SEMGQESRA 75
+G + R R G + RA
Sbjct: 141 -----HGRQRTAGEHQRHLRPHAQGADRRA 165
Score = 33.1 bits (74), Expect = 2.2
Identities = 35/97 (36%), Positives = 40/97 (41%), Gaps = 3/97 (3%)
Frame = +1
Query: 169 RRGPGPAPSLTPADRDGRRTRQDVQRVLALGAG-GWCASGVVPILPRPESRGRAH--GHR 339
R+G GP R GRR RQ R A G C LP +R A GHR
Sbjct: 18 RQGHGPERR-----RRGRRRRQAGTRPAARRQPHGQCPRPGPDGLPAQGNRRHARRAGHR 72
Query: 340 CLLQGARAGWLYWQPARGRRPAERTH*RLLPKRGRGG 450
L +G RAG + P R RRP R+ P R G
Sbjct: 73 RLAEGLRAGPGHGPPRRHRRPQRPAARRVQPVDLRHG 109
>gb|AAK49004.1| USC3-5p [Myxococcus xanthus]
Length = 575
Score = 38.9 bits (89), Expect = 0.040
Identities = 35/91 (38%), Positives = 40/91 (43%), Gaps = 7/91 (7%)
Frame = +3
Query: 165 SASRARSRALFNACGPRWPANPPRRPAR-----TGAGRWRLVCQWRGTYTPAAGKQRTSA 329
+ASRA AL AC PP PAR RWRL C R PA T+
Sbjct: 101 NASRADRGALRRACAAGTARVPPAGPARRRSPSRSRNRWRLRCGTRP--APAPWAAMTTV 158
Query: 330 RTSMPSSRRPSRLALLAAGPW--AAACRADP 416
S P+ RP+R A+L P AA RA P
Sbjct: 159 AGSAPAPARPAR-AVLPRAPLQRTAAPRAGP 188
