Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC000671A_C01 KCC000671A_c01
(462 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|P40265|H13_GLYBA HISTONE H1-III gi|457122|gb|AAA62322.1| hist... 38 0.063
sp|P40264|H12_GLYBA HISTONE H1-II gi|457120|gb|AAA62321.1| histo... 35 0.31
ref|XP_314277.1| ENSANGP00000018697 [Anopheles gambiae] gi|30176... 35 0.41
ref|ZP_00059613.1| COG4581: Superfamily II RNA helicase [Thermob... 34 0.70
ref|ZP_00047912.1| COG0477: Permeases of the major facilitator s... 33 1.2
>sp|P40265|H13_GLYBA HISTONE H1-III gi|457122|gb|AAA62322.1| histone H1-III
gi|1093320|prf||2103263C histone H1:ISOTYPE=III
Length = 228
Score = 37.7 bits (86), Expect = 0.063
Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 2/86 (2%)
Frame = +2
Query: 200 MLRAASGCASGLFGLPAAAPKEPTSRSCRLADGDSAP--VSSPYVAVWRNNELYVSPRRT 373
+L+ ASG F LPAAA KE +++ + A G+ P + P A+ + + P+
Sbjct: 97 LLQTKGKGASGSFKLPAAAKKEKVAKTPKKAAGEKKPQAAAKPKKALEKKKSIAKKPKAA 156
Query: 374 NNITPRNMKSPTPRGLRRFATVGPSA 451
T +K P + ++ A V P+A
Sbjct: 157 ---TATKVKKPVAKSTKKPAAVKPAA 179
>sp|P40264|H12_GLYBA HISTONE H1-II gi|457120|gb|AAA62321.1| histone H1-II
gi|1093319|prf||2103263B histone H1:ISOTYPE=II
Length = 232
Score = 35.4 bits (80), Expect = 0.31
Identities = 25/86 (29%), Positives = 39/86 (45%), Gaps = 2/86 (2%)
Frame = +2
Query: 200 MLRAASGCASGLFGLPAAAPKEPTSRSCRLADGDSAP--VSSPYVAVWRNNELYVSPRRT 373
+L+ ASG F LPAAA KE ++ A G+ P + P A + + P+
Sbjct: 98 LLQTKGKGASGSFKLPAAAKKEKVAKKPMKATGEKKPKAAAKPKKAGEKKKSIAKKPKAA 157
Query: 374 NNITPRNMKSPTPRGLRRFATVGPSA 451
T +K P + ++ A V P+A
Sbjct: 158 ---TATKVKKPVAKSTKKQAAVKPAA 180
>ref|XP_314277.1| ENSANGP00000018697 [Anopheles gambiae] gi|30176595|gb|EAA09590.2|
ENSANGP00000018697 [Anopheles gambiae str. PEST]
Length = 202
Score = 35.0 bits (79), Expect = 0.41
Identities = 23/70 (32%), Positives = 27/70 (37%), Gaps = 5/70 (7%)
Frame = -2
Query: 461 CWRPRWGPPL-----RTAAGRAELGSSCCVALCCLCAWAIRTAHCCARPQRTAS*PELNR 297
CWR R PP RTAA RA ++ AWA+R A RP R
Sbjct: 42 CWRVRPAPPAPSRSARTAAARARAAAAA--------AWAVRAAASTVRPCRRTGGRAART 93
Query: 296 RQLTDTTCWS 267
R T W+
Sbjct: 94 RSAARCTAWT 103
>ref|ZP_00059613.1| COG4581: Superfamily II RNA helicase [Thermobifida fusca]
Length = 947
Score = 34.3 bits (77), Expect = 0.70
Identities = 30/96 (31%), Positives = 43/96 (44%), Gaps = 6/96 (6%)
Frame = -3
Query: 355 VQLIVAPDRNVRRADRS*IAVS*PTRPAGRLL--RCSSRKPEQPR----SATRSGSEHES 194
V L++ +R V+R + + P P GRL + S + Q R SA RS E
Sbjct: 634 VPLVLTVNRQVKRVSANDFPI--PVEPTGRLRIPKSFSARSAQARRDLASALRSKLETLP 691
Query: 193 EAP*WHRYCRIKPQPPQVQRYRHRQRQNA*KHSSRR 86
AP HR P+ P++ R R R++ HS R
Sbjct: 692 TAPIRHRVRDGAPEDPEIAELRARIREHPCHHSEGR 727
>ref|ZP_00047912.1| COG0477: Permeases of the major facilitator superfamily
[Magnetospirillum magnetotacticum]
Length = 151
Score = 33.5 bits (75), Expect = 1.2
Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 5/82 (6%)
Frame = +2
Query: 107 RVLALPVTVPLYLWWLWLNAAIAVPLWGFTFMLRAAS--GCASGLFGLPAAAPKEPTSRS 280
R L L + VP +LW L A A+ ++ TF+L A S A+ + G+P + P+ S
Sbjct: 27 RALILALAVPAFLW--MLRAPDALSVYAVTFLLSALSSINAAAIIVGIPESLPRAVRSAG 84
Query: 281 CRLADGDSAPV---SSPYVAVW 337
+ S V S+ Y+ W
Sbjct: 85 LSIVYALSVSVFGGSTNYLVNW 106
