KCC000667A_c02
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC000667A_C02 KCC000667A_c02
CTCGACCCCAGTCGACTTTTCTCGTCGTTATAATCAAAATGACCAAGGAGGAGATCTGAG
GCTCAGGAGGGCGCCGTGGAGGAGTGTGGAGGACGACGAGGACGAGGAGCTCTCGGAGTG
ACGACGACGATGAGGACCTGGAGTGTGCGATGAGGAGGGTGGCTGCTGGCCTGCTGGCAA
GCAGAGCCCGCAGCGAGAAGAAGAGCCGCAAGGCCATGCAGAAGCTGGGCATGAAGCCCG
TCACTGGCGTGACTCGCGTGACCATCAAGAAGAGCAAGAACATTCTGTTCGTGATCCAGT
CGCCCGATGTCTTCAAGAGCCCCGCCTCGGACACCTACATCATCTTCGGCGAGGCCAAGA
TTGAGGACCTGAGCGCCCAGACCCAGGCCGCCGCCGCGGAGCAGTTCAAGATGCGCCCGG
AGGCCATGGCTGGTGCCGCCGCGCTGGCGGGCGAGGGCGTGCAGGGCTCTGCCGCCGCTG
CCGGCGGTGCGGCCGCGGACGACGACGACGAGGAGGTGGACGACAGCGGTGTGGAGCAGA
AGGACATTGAGCTGGTCATGACCCAGGCCAACGTGTCCCGCTCCAAGGCCGTCAAGGCGC
TCAAAAACGCGGAGGGCGACATCGTGTCCGCCATTATGGAGCTCACCATGTAACGCAGCC
CGCTGTTTGTCTAAATGTCTTTTTnTAATAAGAAAGAAAGACAAACAAACAGCAGAGTGT
TGTGTGCATTTGGTGGGGTGCCCGGTGGCGGGAGGATGCCCCGCCGGTGCACCGCCGTGG
TGGCGACCCGCCAAGGAACACGCCACCGGTGCGTGCCCAATGCTTGGGTGGAATAAAAGT
TTCCAGGGTTATAAAAATTGGGTAG


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC000667A_C02 KCC000667A_c02
         (865 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_187845.1| nascent polypeptide associated complex alpha ch...   200  3e-50
dbj|BAB89723.1| putative nascent polypeptide associated complex ...   197  1e-49
gb|AAK48972.1|AF370545_1 alpha NAC-like protein [Arabidopsis tha...   195  7e-49
gb|AAM52321.1|AC105363_10 Putative nascent polypeptide associate...   194  1e-48
ref|NP_190516.1| alpha NAC-related protein [Arabidopsis thaliana...   194  2e-48

>ref|NP_187845.1| nascent polypeptide associated complex alpha chain -related
           [Arabidopsis thaliana]
           gi|12321974|gb|AAG51031.1|AC069474_30 nascent
           polypeptide associated complex alpha chain, putative;
           85450-84199 [Arabidopsis thaliana]
           gi|15081680|gb|AAK82495.1| AT3g12390/T2E22_130
           [Arabidopsis thaliana] gi|15795158|dbj|BAB03146.1|
           contains similarity to alpha NAC~gene_id:MQC3.21
           [Arabidopsis thaliana] gi|20334844|gb|AAM16178.1|
           AT3g12390/T2E22_130 [Arabidopsis thaliana]
          Length = 203

 Score =  200 bits (508), Expect = 3e-50
 Identities = 115/176 (65%), Positives = 132/176 (74%)
 Frame = +3

Query: 120 DDDDEDLECAMRRVAAGLLASRARSEKKSRKAMQKLGMKPVTGVTRVTIKKSKNILFVIQ 299
           DDD +D E       AG  + ++RSEKKSRKAM KLGMKP+TGV+RVT+KKSKNILFVI 
Sbjct: 38  DDDKDDDEADGLDGEAGGKSKQSRSEKKSRKAMLKLGMKPITGVSRVTVKKSKNILFVIS 97

Query: 300 SPDVFKSPASDTYIIFGEAKIEDLSAQTQAAAAEQFKMRPEAMAGAAALAGEGVQGSAAA 479
            PDVFKSPASDTY+IFGEAKIEDLS+Q Q+ AAEQFK        A  L+    +G +++
Sbjct: 98  KPDVFKSPASDTYVIFGEAKIEDLSSQIQSQAAEQFK--------APDLSNVISKGESSS 149

Query: 480 AGGAAADDDDEEVDDSGVEQKDIELVMTQANVSRSKAVKALKNAEGDIVSAIMELT 647
              AA   DDEEVD+ GVE KDIELVMTQA VSR  AVKALK A+GDIVSAIMELT
Sbjct: 150 ---AAVVQDDEEVDEEGVEPKDIELVMTQAGVSRPNAVKALKAADGDIVSAIMELT 202

>dbj|BAB89723.1| putative nascent polypeptide associated complex alpha chain [Oryza
           sativa (japonica cultivar-group)]
           gi|20161322|dbj|BAB90246.1| putative nascent polypeptide
           associated complex alpha chain [Oryza sativa (japonica
           cultivar-group)]
          Length = 202

 Score =  197 bits (502), Expect = 1e-49
 Identities = 116/179 (64%), Positives = 129/179 (71%), Gaps = 3/179 (1%)
 Frame = +3

Query: 120 DDDDEDLECAMRRVAAGLLASRA---RSEKKSRKAMQKLGMKPVTGVTRVTIKKSKNILF 290
           DDDDED +      A G  + R+   RSEKKSRKAMQKLGMK +TGV+RVTIKKSKNILF
Sbjct: 36  DDDDEDDKDDDVEGAGGDASGRSKQSRSEKKSRKAMQKLGMKTITGVSRVTIKKSKNILF 95

Query: 291 VIQSPDVFKSPASDTYIIFGEAKIEDLSAQTQAAAAEQFKMRPEAMAGAAALAGEGVQGS 470
           VI  PDVFKSP SDTY+IFGEAKIEDLS+Q Q  AAEQFK                +   
Sbjct: 96  VISKPDVFKSPNSDTYVIFGEAKIEDLSSQLQTQAAEQFK-------------APDLSNV 142

Query: 471 AAAAGGAAADDDDEEVDDSGVEQKDIELVMTQANVSRSKAVKALKNAEGDIVSAIMELT 647
            + A  +AA  DDEEVD+SGVE KDIELVMTQA VSRS+AVKALK A GDIV+AIMELT
Sbjct: 143 ISKAEPSAAAQDDEEVDESGVEPKDIELVMTQATVSRSRAVKALKAANGDIVTAIMELT 201

>gb|AAK48972.1|AF370545_1 alpha NAC-like protein [Arabidopsis thaliana]
           gi|18377570|gb|AAL66951.1| alpha NAC-like protein
           [Arabidopsis thaliana]
          Length = 217

 Score =  195 bits (496), Expect = 7e-49
 Identities = 110/176 (62%), Positives = 137/176 (77%)
 Frame = +3

Query: 120 DDDDEDLECAMRRVAAGLLASRARSEKKSRKAMQKLGMKPVTGVTRVTIKKSKNILFVIQ 299
           DDDDE+ E    +  +G  + ++RSEKKSRKAM KLGMKPVTGV+RVTIK++KN+LF I 
Sbjct: 49  DDDDEEEEDDDAQGVSGS-SKQSRSEKKSRKAMLKLGMKPVTGVSRVTIKRTKNVLFFIS 107

Query: 300 SPDVFKSPASDTYIIFGEAKIEDLSAQTQAAAAEQFKMRPEAMAGAAALAGEGVQGSAAA 479
            PDVFKSP S+TY+IFGEAKIEDLS+Q Q  AA+QFKM PE   GA +   E    ++ A
Sbjct: 108 KPDVFKSPHSETYVIFGEAKIEDLSSQLQTQAAQQFKM-PE--IGATSQRAE----ASTA 160

Query: 480 AGGAAADDDDEEVDDSGVEQKDIELVMTQANVSRSKAVKALKNAEGDIVSAIMELT 647
              A  ++D+EE+D++GVE +DI+LVMTQA VSRSKAVKALK+ +GDIVSAIMELT
Sbjct: 161 TVEAQVEEDEEEIDETGVEARDIDLVMTQAGVSRSKAVKALKSHDGDIVSAIMELT 216

>gb|AAM52321.1|AC105363_10 Putative nascent polypeptide associated complex alpha chain [Oryza
           sativa (japonica cultivar-group)]
           gi|29367555|gb|AAO72639.1| putative nascent
           polypeptide-associated complex alpha chain [Oryza sativa
           (japonica cultivar-group)]
          Length = 221

 Score =  194 bits (494), Expect = 1e-48
 Identities = 108/177 (61%), Positives = 134/177 (75%), Gaps = 1/177 (0%)
 Frame = +3

Query: 120 DDDDEDLECAMRRVAAGLLASR-ARSEKKSRKAMQKLGMKPVTGVTRVTIKKSKNILFVI 296
           DDDDED +    + A G   S+ +RSEKKSRKAM KLGMKPVTGV+R+TIK++KNILFV+
Sbjct: 55  DDDDEDEDEDGEQGAIGNEGSKQSRSEKKSRKAMMKLGMKPVTGVSRITIKRAKNILFVV 114

Query: 297 QSPDVFKSPASDTYIIFGEAKIEDLSAQTQAAAAEQFKMRPEAMAGAAALAGEGVQGSAA 476
             PDVFKSP S+TY+IFGEAKIEDLS+Q QA AA+QF+M+  +              S  
Sbjct: 115 SKPDVFKSPTSETYVIFGEAKIEDLSSQLQAQAAQQFRMQDLSKV-----------MSKP 163

Query: 477 AAGGAAADDDDEEVDDSGVEQKDIELVMTQANVSRSKAVKALKNAEGDIVSAIMELT 647
            A  AA  D++EEVD++G+E +DI+LVMTQA+VSR+KAVKALK  +GDIVSAIMELT
Sbjct: 164 DAAAAAPADEEEEVDETGIEPRDIDLVMTQASVSRAKAVKALKAHDGDIVSAIMELT 220

>ref|NP_190516.1| alpha NAC-related protein [Arabidopsis thaliana]
           gi|11281614|pir||T46225 alpha NAC-like protein -
           Arabidopsis thaliana gi|6561948|emb|CAB62452.1| alpha
           NAC-like protein [Arabidopsis thaliana]
           gi|12324452|gb|AAG52192.1|AC012329_19 putative alpha
           NAC; 61864-63065 [Arabidopsis thaliana]
          Length = 217

 Score =  194 bits (493), Expect = 2e-48
 Identities = 109/176 (61%), Positives = 137/176 (76%)
 Frame = +3

Query: 120 DDDDEDLECAMRRVAAGLLASRARSEKKSRKAMQKLGMKPVTGVTRVTIKKSKNILFVIQ 299
           DDDDE+ E    +  +G  + ++RSEKKSRKAM KLGMKPVTGV+RVTIK++KN+LF I 
Sbjct: 49  DDDDEEEEDDDAQGVSGS-SKQSRSEKKSRKAMLKLGMKPVTGVSRVTIKRTKNVLFFIS 107

Query: 300 SPDVFKSPASDTYIIFGEAKIEDLSAQTQAAAAEQFKMRPEAMAGAAALAGEGVQGSAAA 479
            PDVFKSP S+TY+IFGEAKIEDLS+Q Q  AA+QF+M PE   GA +   E    ++ A
Sbjct: 108 KPDVFKSPHSETYVIFGEAKIEDLSSQLQTQAAQQFRM-PE--IGATSQRAE----ASTA 160

Query: 480 AGGAAADDDDEEVDDSGVEQKDIELVMTQANVSRSKAVKALKNAEGDIVSAIMELT 647
              A  ++D+EE+D++GVE +DI+LVMTQA VSRSKAVKALK+ +GDIVSAIMELT
Sbjct: 161 TVEAQVEEDEEEIDETGVEARDIDLVMTQAGVSRSKAVKALKSHDGDIVSAIMELT 216



EST assemble image


clone accession position
1 HC013f06_r AV632863 1 577
2 HCL077d02_r AV643861 6 589
3 LC042d01_r AV621896 22 581
4 CM022c10_r AV387873 87 670
5 CM022g06_r AV387864 87 571
6 CM005d04_r AV386864 90 665
7 LC003b01_r AV619050 93 280
8 LC017d10_r AV620089 95 628
9 LC057c02_r AV622972 95 570
10 LC057a10_r AV622958 95 643
11 CM097a10_r AV393206 95 567
12 LC036h08_r AV621496 95 628
13 CM020b06_r AV397491 98 723
14 HC027e05_r AV633967 99 579
15 CM026f06_r AV387536 99 718
16 MXL019a08_r BP094171 99 586
17 CM036e05_r AV388784 99 436
18 HC008d07_r AV632452 99 628
19 HC086d04_r AV638437 99 505
20 CM021g03_r AV387956 99 741
21 LCL083f11_r AV630747 99 534
22 HC099h07_r AV639481 99 597
23 LC002b11_r AV618982 100 475
24 CM097h09_r AV393244 100 651
25 LC005h04_r AV619264 100 628
26 HC061f02_r AV636594 101 552
27 MXL061g11_r BP096616 101 505
28 HC081a12_r AV638040 101 551
29 LC053h08_r AV622744 101 547
30 LC008a04_r AV619411 102 625
31 LC033a12_r AV621231 103 628
32 MX043f10_r BP087790 104 480
33 HC100a03_r AV639487 104 539
34 HC057h01_r AV636312 104 611
35 CM002a07_r AV397833 104 490
36 MX050c08_r BP088053 104 477
37 HC089e07_r AV638693 104 535
38 HC055a08_r AV636090 105 569
39 HC092c04_r AV638897 105 560
40 LC046h06_r AV622232 105 597
41 HC070c07_r AV637217 105 558
42 CM093d10_r AV393006 106 661
43 HC099c09_r AV639432 108 610
44 HC096h09_r AV639250 109 462
45 LC042a02_r AV621868 110 663
46 CM082b05_r AV392133 119 675
47 MX032f08_r BP087349 119 437
48 HC062g03_r AV636678 119 553
49 CM047g12_r AV388606 119 490
50 LC027c12_r AV620823 119 627
51 LC006a06_r AV619277 119 673
52 CM088d09_r AV393052 119 711
53 MXL015h10_r BP093936 120 476
54 HC081c03_r AV638052 124 499
55 HC019e07_r AV633327 135 552
56 HC040c12_r AV634974 172 651
57 CM011h11_r AV386949 173 737
58 HC075e11_r AV637630 193 658
59 CM075d01_r AV391587 200 760
60 CM046c10_r AV388032 202 779
61 CM030a02_r AV397359 204 444
62 CM056e05_r AV390292 205 697
63 CM080h06_r AV392034 206 709
64 CM030h11_r AV397378 207 718
65 CL53c12_r AV395987 208 473
66 CM067b03_r AV390914 225 805
67 HC038b06_r AV634807 226 593
68 MX018h01_r BP086861 249 657
69 LC070b07_r AV623895 304 746
70 CM031c10_r AV388358 471 984




Chlamydomonas reinhardtii
Kazusa DNA Research Institute