KCC000658A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC000658A_C01 KCC000658A_c01
cacacgtgtgCTATATATCTACCTCCCATGTTCAGGGCTGCACCAAAAGCACGGCCTGCG
AATTCTATGTAGAACGAGCACATACTCGCAGCCCTCGCAGCCATGGCTGATTCCCGCTCC
TCGAGGTTTAAAGTCTATGTTCGTCTTCGACCATCTCCTGGTGCAAGCGGAACCGATGTC
GTCCAAGCGGAGCACCGAGTCCTCACCCTGAAGGACCCGGTGAAGGGACACAGCAGCGAG
TTTGTCTTCGATAAAGTATTTGATGCAGAGGCGCGCCAGGAGAGCGTGTTTGCGGACGTC
GGCGTGCCCCTCGTCGAGCATGTTATACAGGGGTACAACGCGTGCTGCTTTGCCTACGGG
CAAACTGGTGCGGGAAAGACTCACAGCATGTATGGGCGCGAGGGCTGCTCCGTCTTTGCC
CAGCCCGGCACCCCCGAACACGGCGACCTGGGCGTCATACCGCGCGCGTGTGAGCTGCTA
TGGAAGGCCGCCAGTCAGGTGAACCGGAAGGCGGAGGCAGCAGCGGCCACCGGGGGCGGC
AACAGCGCCCCGCGCATCAAGCTCTTTGTTAGCTTCATGGAGATCTACCTGGACCAGATT
CGCGACCTGGGCGCAGCGGCGCAAGCGCACCTCAAGGCCACCGCGGCCCGCTCGCCGCCG
CCCATTCCTGGTGACGCCGCCGCCAGCGCGGGGCTGGGCCTGTCGGCGTATGCGGCTGAC
GGCGGCGGTGCGCCGGGCCGCTCCACAGCCACTTCGCTGGGCGCGGCTGCCGACTACGTG
CGCACCAACCTGGATGTGTTGGAAGACTCGTCGGGCATGACGTTCGTGAAGGACCTCACC
TTTATGGAGGTGTCGTGTGTGGAGGACATGCTGGCAGTGCTGCGGGCGGGCTACGCACTG
CGCGCCACGT


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC000658A_C01 KCC000658A_c01
         (910 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|XP_314218.1| ENSANGP00000014462 [Anopheles gambiae] gi|21297...    91  2e-17
emb|CAC24682.1| kinesin [Leishmania major]                             91  3e-17
ref|XP_319556.1| ENSANGP00000017737 [Anopheles gambiae] gi|21302...    88  2e-16
gb|AAK93514.1| SD04054p [Drosophila melanogaster]                      87  3e-16
ref|NP_064627.1| kinesin-like 7; kinesin-like protein 2 [Homo sa...    87  4e-16

>ref|XP_314218.1| ENSANGP00000014462 [Anopheles gambiae] gi|21297483|gb|EAA09628.1|
           ENSANGP00000014462 [Anopheles gambiae str. PEST]
          Length = 362

 Score = 91.3 bits (225), Expect = 2e-17
 Identities = 68/224 (30%), Positives = 108/224 (47%), Gaps = 9/224 (4%)
 Frame = +1

Query: 130 KVYVRLRP----SPGASGTDVVQAEHRVLTLKDPVKGHSSE--FVFDKVFDAEARQESVF 291
           KV VR RP       ++   V+Q ++ ++ L +P   ++S+  F FD  +   A  E+++
Sbjct: 6   KVVVRCRPMNKREQQSNCKSVIQIDNSLVNLDNPNDPNASQKSFQFDNAYGYAATTENIY 65

Query: 292 ADVGVPLVEHVIQGYNACCFAYGQTGAGKTHSMYGREGCSVFAQPGTPEHGDLGVIPRAC 471
           +D+   LVE V++GYNA  FAYGQTG GK+H+M G       A P      ++G+IPR+ 
Sbjct: 66  SDICYSLVESVLEGYNATIFAYGQTGCGKSHTMQGTTYNLSAADPNNA--NNIGIIPRSF 123

Query: 472 ELLWKAASQVNRKAEAAAATGGGNSAPRIKLFVSFMEIYLDQIRDLGAAAQAHLKATAAR 651
           E +++A S                S  R  + VS++EIY + IRDL    Q+     +  
Sbjct: 124 EHIFEAISLA--------------SEVRYLVLVSYLEIYNETIRDL-LQPQSPAATASTL 168

Query: 652 SPPPIPGDAAASAGLGLSAYAADGG---GAPGRSTATSLGAAAD 774
               +PG+      L L   A D G    A GR +   +  + +
Sbjct: 169 QIKEVPGEGVMVQNLSLPHGARDEGVHRAAGGRISLEQMSTSVE 212

>emb|CAC24682.1| kinesin [Leishmania major]
          Length = 1315

 Score = 90.5 bits (223), Expect = 3e-17
 Identities = 49/125 (39%), Positives = 71/125 (56%)
 Frame = +1

Query: 235 SEFVFDKVFDAEARQESVFADVGVPLVEHVIQGYNACCFAYGQTGAGKTHSMYGREGCSV 414
           SE   ++   AEA Q +++  + +PLV+  +QGYN C FAYGQTG+GKT++M        
Sbjct: 247 SEHTPEQERQAEAEQVAIYEQLAIPLVDAALQGYNTCMFAYGQTGSGKTYTMM------- 299

Query: 415 FAQPGTPEHGDLGVIPRACELLWKAASQVNRKAEAAAATGGGNSAPRIKLFVSFMEIYLD 594
               GT +H   G+IPR C+LL    +  N +A    A      A  + L +S+MEIY +
Sbjct: 300 ----GTAQHP--GLIPRLCQLLLSQVAMRNAEAHDGCAVSPSTRAAAVVLQLSYMEIYNE 353

Query: 595 QIRDL 609
           Q+RDL
Sbjct: 354 QVRDL 358

>ref|XP_319556.1| ENSANGP00000017737 [Anopheles gambiae] gi|21302508|gb|EAA14653.1|
           ENSANGP00000017737 [Anopheles gambiae str. PEST]
          Length = 670

 Score = 88.2 bits (217), Expect = 2e-16
 Identities = 62/197 (31%), Positives = 98/197 (49%), Gaps = 6/197 (3%)
 Frame = +1

Query: 130 KVYVRLRP----SPGASGTDVVQAEHRVLTLKDPVKGHSSE--FVFDKVFDAEARQESVF 291
           KV VR RP       ++   V+Q ++ ++ L +P   ++S+  F FD  +   A  E+++
Sbjct: 6   KVVVRCRPMNKREQQSNCKSVIQIDNSLVNLDNPNDPNASQKSFQFDNAYGYAATTENIY 65

Query: 292 ADVGVPLVEHVIQGYNACCFAYGQTGAGKTHSMYGREGCSVFAQPGTPEHGDLGVIPRAC 471
           +D+   LVE V++GYNA  FAYGQTG GK+H+M G       A P      ++G+IPR+ 
Sbjct: 66  SDICYSLVESVLEGYNATIFAYGQTGCGKSHTMQGTTYNLSAADPNNA--NNIGIIPRSF 123

Query: 472 ELLWKAASQVNRKAEAAAATGGGNSAPRIKLFVSFMEIYLDQIRDLGAAAQAHLKATAAR 651
           E +++A S                S  R  + VS++EIY + IRDL    Q+     +  
Sbjct: 124 EHIFEAISLA--------------SEVRYLVLVSYLEIYNETIRDL-LQPQSPAATASTL 168

Query: 652 SPPPIPGDAAASAGLGL 702
               +PG+      L L
Sbjct: 169 QIKEVPGEGVMVQNLSL 185

>gb|AAK93514.1| SD04054p [Drosophila melanogaster]
          Length = 1013

 Score = 87.4 bits (215), Expect = 3e-16
 Identities = 67/207 (32%), Positives = 99/207 (47%), Gaps = 19/207 (9%)
 Frame = +1

Query: 97  AAMADSRSSRFKVYVRLRPSPG-----ASGTDVVQAE--HRVLTLK-----DPVKGHSSE 240
           + ++ S  S   V VR+RP           T+VVQ       LT++     D   G +  
Sbjct: 3   SCLSVSEESNMIVAVRVRPLNALECTRGQVTNVVQVHGNSNELTVQAGSSADASAGVTHF 62

Query: 241 FVFDKVF---DAEAR----QESVFADVGVPLVEHVIQGYNACCFAYGQTGAGKTHSMYGR 399
           F +D+V+   D E +    Q  VF     PL++   +GYNAC FAYGQTG+GK++SM G 
Sbjct: 63  FSYDQVYYSCDPERKNFACQAKVFEGTARPLIDTAFEGYNACLFAYGQTGSGKSYSMMGI 122

Query: 400 EGCSVFAQPGTPEHGDLGVIPRACELLWKAASQVNRKAEAAAATGGGNSAPRIKLFVSFM 579
           E     A  G P H + G+IPR C  L++    V  + +            ++++ VS+ 
Sbjct: 123 EALDDAALDGGPPHYEAGIIPRFCHELFRRIEAVKSQQQL-----------QVEVEVSYF 171

Query: 580 EIYLDQIRDLGAAAQAHLKATAARSPP 660
           EIY ++I DL   +  H  AT   S P
Sbjct: 172 EIYNEKIHDL--LSVQHAAATTGESTP 196

>ref|NP_064627.1| kinesin-like 7; kinesin-like protein 2 [Homo sapiens]
           gi|9501797|dbj|BAB03309.1| kinesin-like protein 2 [Homo
           sapiens]
          Length = 1388

 Score = 87.0 bits (214), Expect = 4e-16
 Identities = 69/173 (39%), Positives = 90/173 (51%), Gaps = 5/173 (2%)
 Frame = +1

Query: 130 KVYVRLRPSPGASGT-DVVQAEHRVLTLKDPVKGHSSE----FVFDKVFDAEARQESVFA 294
           KV+VR+RP    SG+ D  Q     +     ++ HS+     F FD V D +  QESVFA
Sbjct: 28  KVFVRIRPPAERSGSADGEQNLCLSVLSSTSLRLHSNPEPKTFTFDHVADVDTTQESVFA 87

Query: 295 DVGVPLVEHVIQGYNACCFAYGQTGAGKTHSMYGREGCSVFAQPGTPEHGDLGVIPRACE 474
            V   +VE  + GYN   FAYGQTG+GKT +M G      F+      H   GVIPR+ E
Sbjct: 88  TVAKSIVESCMSGYNGTIFAYGQTGSGKTFTMMGPSESDNFS------HNLRGVIPRSFE 141

Query: 475 LLWKAASQVNRKAEAAAATGGGNSAPRIKLFVSFMEIYLDQIRDLGAAAQAHL 633
            L+   S ++R+ E A   G G S        SF+EIY +QI DL  +A A L
Sbjct: 142 YLF---SLIDREKEKA---GAGKS---FLCKCSFIEIYNEQIYDLLDSASAGL 185



EST assemble image


clone accession position
1 HCL033d12_r AV641428 1 476
2 CL54g05_r AV396176 11 509
3 MXL081d11_r BP097793 186 546
4 HCL047f12_r AV642220 260 537
5 CL52c05_r AV395869 393 910




Chlamydomonas reinhardtii
Kazusa DNA Research Institute