KCC000639A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC000639A_C01 KCC000639A_c01
gcaggatcaacgtatGCTGAACAAATCAGCAGGGCCTCGCGTGCAACACCCCATCCGAAA
GCAGAATGCAGGAGTGCCCGAATAGCCCACGGGCTATGCCAAATGGCGTTAGCCCCAGGG
AAAATGCTGTCCAGATACTGCTGCATCATAACAGCCGCGAGAATTTGGAGCAGCAGAGCC
CGGGTTCTCAAGCTGGCTCGGCTCCGGGGTCACCTCGGCCCAGCCTGCGTGCGAGTGTTG
AGCTGGACCCGCTTAACAAGCTACTGCGGAAGAACAAGGCCTGGTCCGCCGCTCGACTGG
CCGAGGACCCCGGCTACTTCCAGCGCCTCATTGCGCAGCAGGCGCCCGAGTACCTGTGGA
TCGGCTGCTCCGACTCGCGCGTGCCGGCCAACGCCAT


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC000639A_C01 KCC000639A_c01
         (397 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|ZP_00032564.1| COG0288: Carbonic anhydrase [Burkholderia fun...    75  2e-13
ref|NP_422363.1| carbonic anhydrase family protein [Caulobacter ...    72  2e-12
ref|ZP_00068960.1| COG0288: Carbonic anhydrase [Microbulbifer de...    70  5e-12
ref|ZP_00064759.1| COG0288: Carbonic anhydrase [Microbulbifer de...    70  5e-12
ref|NP_641936.1| carbonic anhydrase [Xanthomonas axonopodis pv. ...    70  7e-12

>ref|ZP_00032564.1| COG0288: Carbonic anhydrase [Burkholderia fungorum]
          Length = 258

 Score = 75.1 bits (183), Expect = 2e-13
 Identities = 35/54 (64%), Positives = 40/54 (73%)
 Frame = +3

Query: 231 ASVELDPLNKLLRKNKAWSAARLAEDPGYFQRLIAQQAPEYLWIGCSDSRVPAN 392
           AS   +PL+ L   N+AW A +L+EDP YF RL  QQ PEYLWIGCSDSRVPAN
Sbjct: 5   ASPPDNPLSHLFDNNEAWVARKLSEDPEYFSRLAHQQTPEYLWIGCSDSRVPAN 58

>ref|NP_422363.1| carbonic anhydrase family protein [Caulobacter crescentus CB15]
           gi|25291482|pir||G87691 carbonic anhydrase family
           protein [imported] - Caulobacter crescentus
           gi|13425309|gb|AAK25531.1| carbonic anhydrase family
           protein [Caulobacter crescentus CB15]
          Length = 222

 Score = 71.6 bits (174), Expect = 2e-12
 Identities = 32/47 (68%), Positives = 36/47 (76%)
 Frame = +3

Query: 252 LNKLLRKNKAWSAARLAEDPGYFQRLIAQQAPEYLWIGCSDSRVPAN 392
           L  L  KN AWS ++ AEDP +F RL  QQ+PEYLWIGCSDSRVPAN
Sbjct: 2   LEDLKAKNAAWSKSKTAEDPDFFTRLAKQQSPEYLWIGCSDSRVPAN 48

>ref|ZP_00068960.1| COG0288: Carbonic anhydrase [Microbulbifer degradans 2-40]
          Length = 50

 Score = 70.5 bits (171), Expect = 5e-12
 Identities = 31/50 (62%), Positives = 39/50 (78%)
 Frame = +3

Query: 243 LDPLNKLLRKNKAWSAARLAEDPGYFQRLIAQQAPEYLWIGCSDSRVPAN 392
           ++ L+ L + NK W+ A  AEDP +F++L AQQ PEYLWIGCSDSRVPAN
Sbjct: 1   MNDLDNLFQSNKDWAEAIKAEDPHFFEKLSAQQFPEYLWIGCSDSRVPAN 50

>ref|ZP_00064759.1| COG0288: Carbonic anhydrase [Microbulbifer degradans 2-40]
          Length = 209

 Score = 70.5 bits (171), Expect = 5e-12
 Identities = 31/50 (62%), Positives = 39/50 (78%)
 Frame = +3

Query: 243 LDPLNKLLRKNKAWSAARLAEDPGYFQRLIAQQAPEYLWIGCSDSRVPAN 392
           ++ L+ L + NK W+ A  AEDP +F++L AQQ PEYLWIGCSDSRVPAN
Sbjct: 1   MNDLDNLFQSNKDWAEAIKAEDPHFFEKLSAQQFPEYLWIGCSDSRVPAN 50

>ref|NP_641936.1| carbonic anhydrase [Xanthomonas axonopodis pv. citri str. 306]
           gi|21107790|gb|AAM36472.1| carbonic anhydrase
           [Xanthomonas axonopodis pv. citri str. 306]
          Length = 220

 Score = 70.1 bits (170), Expect = 7e-12
 Identities = 31/50 (62%), Positives = 36/50 (72%)
 Frame = +3

Query: 243 LDPLNKLLRKNKAWSAARLAEDPGYFQRLIAQQAPEYLWIGCSDSRVPAN 392
           ++ LN LL  N+AWS     EDP +F +L  QQ PEYLWIGCSDSRVPAN
Sbjct: 1   MNELNHLLENNRAWSERIRREDPEFFSKLSTQQTPEYLWIGCSDSRVPAN 50



EST assemble image


clone accession position
1 CL51b06_r AV395894 1 259
2 MXL069e11_r BP097071 16 398
3 LCL093g05_r AV631428 28 198




Chlamydomonas reinhardtii
Kazusa DNA Research Institute