Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC000629A_C01 KCC000629A_c01
(1045 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|ZP_00007413.1| COG0337: 3-dehydroquinate synthetase [Rhodoba... 51 3e-05
ref|NP_780438.1| RIKEN cDNA 5033413A03 [Mus musculus] gi|2635495... 50 8e-05
ref|XP_128495.3| RIKEN cDNA 5033413A03 [Mus musculus] 50 8e-05
pir||T02345 hypothetical protein KIAA0324 - human (fragment) gi|... 47 7e-04
dbj|BAA83717.1| RNA binding protein [Homo sapiens] 47 7e-04
>ref|ZP_00007413.1| COG0337: 3-dehydroquinate synthetase [Rhodobacter sphaeroides]
Length = 617
Score = 51.2 bits (121), Expect = 3e-05
Identities = 53/156 (33%), Positives = 61/156 (38%), Gaps = 16/156 (10%)
Frame = -2
Query: 492 AEQQGHEHQADQAAEEAATDGHEDG--------HAEPEAEAAEGREAEGAEHG------- 358
A +QG +D AAEE DG DG A P +E A R G G
Sbjct: 58 AREQGGWPASDGAAEENRCDGGHDGGGKDGRGQRAGPGSERALSRFGRGDRAGRQPDHRR 117
Query: 357 GARRRPRWCCSR*GQPGSERCATGRAPCEQRSRWSHPRGHRSGRRQPEHPPASRHQR*GQ 178
R R R R G+PG AP Q R H R GR QP H P + Q
Sbjct: 118 NLRPRRRALLPREGEPGPR-----AAPARQPLRALHRRRRLHGRGQPPHDPRAGRVGLAQ 172
Query: 177 RRPSRPEA-GPSSG*GWESRPAEPCTTTARRATRGA 73
RP R A G + G A+P A RA+RGA
Sbjct: 173 GRPRRALAPGAAQGDAAAPAHAQPARDAA-RASRGA 207
>ref|NP_780438.1| RIKEN cDNA 5033413A03 [Mus musculus] gi|26354955|dbj|BAC41104.1|
unnamed protein product [Mus musculus]
Length = 2607
Score = 49.7 bits (117), Expect = 8e-05
Identities = 88/316 (27%), Positives = 116/316 (35%), Gaps = 8/316 (2%)
Frame = -1
Query: 946 QAHTAPSSKKQTSHR*HHCTHNFVIPAKRSGKSGAA-----GHSTPQ-PRPP*QPSADKR 785
++H K SH H PA + G+S + GHS + P+ SA +
Sbjct: 364 RSHGRAKRDKSHSHTPSHRAGRSRSPATKRGRSRSRTPTKRGHSRSRSPQWRRSRSAQRW 423
Query: 784 GP-RNPLLTHSSRIE*RSVYTVQACQHRPTRFVQRPLSASARRAAALAASTKRRPRIPAP 608
G R+P SR R ++ R +R S SARR + R PA
Sbjct: 424 GKSRSPQRRGRSRSPQRPGWS------RSRNTQRRGRSRSARRG-------RSHSRSPAT 470
Query: 607 HTLCSAAASALRGRPTGHPSCSEPSAKPTRRRG*R*RP-R*TAGSRTSGRSGR*RSRHRR 431
+ A RGR S P RRR P R + SRT R GR SR R
Sbjct: 471 RGRSRSRTPARRGRSR--------SRTPARRRSRSRTPARRRSRSRTPARRGR--SRSRT 520
Query: 430 A*RRACRTRSRSRRRARSRRG*TRGGEATTTVVLFTVGAAWV*TLRDGAGALRAEKPLEP 251
RR RTRS RRR+RSR R G + + G + T G R+ P
Sbjct: 521 PTRRRSRTRSPVRRRSRSRSQARRSGRSRSRTPARRSGRSRSRT-PARRGRSRSRTPARR 579
Query: 250 PTRPPEREEAARASSGIAAPAMRAAATIEARGRAIFWIGLGESSC*ALHHHRAASHAGGS 71
R R A R S PA R R R+ + G S H R G S
Sbjct: 580 SARSRSRTPARRGRSRSRTPARR-------RSRSRSLVRRGRS------HSRTPQRRGRS 626
Query: 70 DNRSTLQQHFRFTEKK 23
+ S + R ++++
Sbjct: 627 GSSSERKNKSRTSQRR 642
Score = 42.4 bits (98), Expect = 0.013
Identities = 43/166 (25%), Positives = 66/166 (38%)
Frame = -1
Query: 871 PAKRSGKSGAAGHSTPQPRPP*QPSADKRGPRNPLLTHSSRIE*RSVYTVQACQHRPTRF 692
P R+ + G+ P+ + P + +P LT +R+ RS
Sbjct: 1523 PKSRTARRGSRSSIEPKTKSR-TPPRRRSSRSSPELTRKARVSRRS-------------- 1567
Query: 691 VQRPLSASARRAAALAASTKRRPRIPAPHTLCSAAASALRGRPTGHPSCSEPSAKPTRRR 512
R S+S + +R P + +P + +S R S S P K T RR
Sbjct: 1568 --RSASSSPEIRSRTPPRRRRSPSVSSPEPTEKSRSSRRRR------SVSSPRTKTTSRR 1619
Query: 511 G*R*RPR*TAGSRTSGRSGR*RSRHRRA*RRACRTRSRSRRRARSR 374
G P+ R+ RS R ++R R R+ ++S SRRR RSR
Sbjct: 1620 GRSPSPKPRGLQRSRSRSRREKTRTTRRRDRSGSSQSTSRRRQRSR 1665
Score = 37.7 bits (86), Expect = 0.33
Identities = 42/155 (27%), Positives = 60/155 (38%), Gaps = 7/155 (4%)
Frame = -1
Query: 817 RPP*QPSADKRGPR----NPLLTHSSRIE*RSVYTVQACQHRPTRFVQRPLSASARRAAA 650
RP P GP PLL R + + + Q P++ S+ +
Sbjct: 251 RPSPSPERSSTGPELPAPTPLLVEQHDDSPRPLAAIPSSQE--------PVNPSSEASPT 302
Query: 649 LAASTKRRPRIPAPHTLC-SAAASALRGRPTGHPSCSEPSAKPTRRRG*R*R--PR*TAG 479
S + P P T S S + + H S S S KPT G R T+
Sbjct: 303 RGCSPPKSPEKPPQSTSSESCPPSPQPTKVSRHASSSPESLKPTPAPGSRREISSSPTSK 362
Query: 478 SRTSGRSGR*RSRHRRA*RRACRTRSRSRRRARSR 374
+R+ GR+ R +S RA R+RS + +R RSR
Sbjct: 363 NRSHGRAKRDKSHSHTPSHRAGRSRSPATKRGRSR 397
>ref|XP_128495.3| RIKEN cDNA 5033413A03 [Mus musculus]
Length = 2607
Score = 49.7 bits (117), Expect = 8e-05
Identities = 88/316 (27%), Positives = 116/316 (35%), Gaps = 8/316 (2%)
Frame = -1
Query: 946 QAHTAPSSKKQTSHR*HHCTHNFVIPAKRSGKSGAA-----GHSTPQ-PRPP*QPSADKR 785
++H K SH H PA + G+S + GHS + P+ SA +
Sbjct: 364 RSHGRAKRDKSHSHTPSHRAGRSRSPATKRGRSRSRTPTKRGHSRSRSPQWRRSRSAQRW 423
Query: 784 GP-RNPLLTHSSRIE*RSVYTVQACQHRPTRFVQRPLSASARRAAALAASTKRRPRIPAP 608
G R+P SR R ++ R +R S SARR + R PA
Sbjct: 424 GKSRSPQRRGRSRSPQRPGWS------RSRNTQRRGRSRSARRG-------RSHSRSPAT 470
Query: 607 HTLCSAAASALRGRPTGHPSCSEPSAKPTRRRG*R*RP-R*TAGSRTSGRSGR*RSRHRR 431
+ A RGR S P RRR P R + SRT R GR SR R
Sbjct: 471 RGRSRSRTPARRGRSR--------SRTPARRRSRSRTPARRRSRSRTPARRGR--SRSRT 520
Query: 430 A*RRACRTRSRSRRRARSRRG*TRGGEATTTVVLFTVGAAWV*TLRDGAGALRAEKPLEP 251
RR RTRS RRR+RSR R G + + G + T G R+ P
Sbjct: 521 PARRRSRTRSPVRRRSRSRSQARRSGRSRSRTPARRSGRSRSRT-PARRGRSRSRTPARR 579
Query: 250 PTRPPEREEAARASSGIAAPAMRAAATIEARGRAIFWIGLGESSC*ALHHHRAASHAGGS 71
R R A R S PA R R R+ + G S H R G S
Sbjct: 580 SARSRSRTPARRGRSRSRTPARR-------RSRSRSLVRRGRS------HSRTPQRRGRS 626
Query: 70 DNRSTLQQHFRFTEKK 23
+ S + R ++++
Sbjct: 627 GSSSERKNKSRTSQRR 642
Score = 42.4 bits (98), Expect = 0.013
Identities = 43/166 (25%), Positives = 66/166 (38%)
Frame = -1
Query: 871 PAKRSGKSGAAGHSTPQPRPP*QPSADKRGPRNPLLTHSSRIE*RSVYTVQACQHRPTRF 692
P R+ + G+ P+ + P + +P LT +R+ RS
Sbjct: 1523 PKSRTARRGSRSSIEPKTKSH-TPPRRRSSRSSPELTRKARVSRRS-------------- 1567
Query: 691 VQRPLSASARRAAALAASTKRRPRIPAPHTLCSAAASALRGRPTGHPSCSEPSAKPTRRR 512
R S+S + +R P + +P + +S R S S P K T RR
Sbjct: 1568 --RSASSSPEIRSRTPPRRRRSPSVSSPEPTEKSRSSRRRR------SVSSPRTKTTSRR 1619
Query: 511 G*R*RPR*TAGSRTSGRSGR*RSRHRRA*RRACRTRSRSRRRARSR 374
G P+ R+ RS R ++R R R+ ++S SRRR RSR
Sbjct: 1620 GRSPSPKPRGLQRSRSRSRREKTRTTRRRDRSGSSQSTSRRRQRSR 1665
Score = 37.4 bits (85), Expect = 0.43
Identities = 33/108 (30%), Positives = 48/108 (43%), Gaps = 3/108 (2%)
Frame = -1
Query: 688 QRPLSASARRAAALAASTKRRPRIPAPHTLC-SAAASALRGRPTGHPSCSEPSAKPTRRR 512
Q P++ S+ + S + P P T S S + + H S S S KPT
Sbjct: 290 QEPVNPSSEASPTRGCSPPKSPEKPPQSTSSESCPPSPQPTKGSRHASSSPESLKPTPAP 349
Query: 511 G*R*R--PR*TAGSRTSGRSGR*RSRHRRA*RRACRTRSRSRRRARSR 374
G R T+ +R+ GR+ R +S RA R+RS + +R RSR
Sbjct: 350 GSRREISSSPTSKNRSHGRAKRDKSHSHTPSHRAGRSRSPATKRGRSR 397
>pir||T02345 hypothetical protein KIAA0324 - human (fragment)
gi|2996650|gb|AAC08453.1| KIAA0324 [Homo sapiens]
Length = 1791
Score = 46.6 bits (109), Expect = 7e-04
Identities = 46/167 (27%), Positives = 71/167 (41%), Gaps = 1/167 (0%)
Frame = -1
Query: 871 PAKRSGKSGAAGHSTPQPRPP*QPSADKRGPRN-PLLTHSSRIE*RSVYTVQACQHRPTR 695
P R+ + G+ S+P+P+ + +R R+ P LT +R+ RS
Sbjct: 695 PKSRTARRGS--RSSPEPKTKSRTPPRRRSSRSSPELTRKARLSRRS------------- 739
Query: 694 FVQRPLSASARRAAALAASTKRRPRIPAPHTLCSAAASALRGRPTGHPSCSEPSAKPTRR 515
R S+S + +R P + +P + +S R S S P K T R
Sbjct: 740 ---RSASSSPETRSRTPPRHRRSPSVSSPEPAEKSRSSRRRR------SASSPRTKTTSR 790
Query: 514 RG*R*RPR*TAGSRTSGRSGR*RSRHRRA*RRACRTRSRSRRRARSR 374
RG P+ R+ RS R ++R R R+ ++S SRRR RSR
Sbjct: 791 RGRSPSPKPRGLQRSRSRSRREKTRTTRRRDRSGSSQSTSRRRQRSR 837
Score = 34.3 bits (77), Expect = 3.7
Identities = 52/170 (30%), Positives = 66/170 (38%), Gaps = 18/170 (10%)
Frame = -1
Query: 832 STPQPRPP*QPSADKRGP-RNPLLTHSSRIE*RSVYTVQACQHRPTRFVQRPLSASARRA 656
++PQ R S D + R PL S V + R +R P RA
Sbjct: 583 ASPQERSESDSSPDSKAKTRTPLRQRSRSGSSPEVDSKSRLSPRRSRSGSSPEVKDKPRA 642
Query: 655 AALAAS---TKRRPRIPAPHTLC--SAAASALRGR---PTGHPSC-SEPSAKP---TRRR 512
A A S + P+ PAP L S + S+ +GR P G S S P P T RR
Sbjct: 643 APRAQSGSDSSPEPKAPAPRALPRRSRSGSSSKGRGPSPEGSSSTESSPEHPPKSRTARR 702
Query: 511 G*R*RPR*TAGSRT-----SGRSGR*RSRHRRA*RRACRTRSRSRRRARS 377
G R P SRT S RS +R R RR+ S R+R+
Sbjct: 703 GSRSSPEPKTKSRTPPRRRSSRSSPELTRKARLSRRSRSASSSPETRSRT 752
Score = 33.9 bits (76), Expect = 4.8
Identities = 21/69 (30%), Positives = 27/69 (38%)
Frame = -2
Query: 285 RAPCEQRSRWSHPRGHRSGRRQPEHPPASRHQR*GQRRPSRPEAGPSSG*GWESRPAEPC 106
R+ + R P G S PEHPP SR R G R P+ + S + P
Sbjct: 669 RSGSSSKGRGPSPEGSSSTESSPEHPPKSRTARRGSRSSPEPKTKSRTPPRRRSSRSSPE 728
Query: 105 TTTARRATR 79
T R +R
Sbjct: 729 LTRKARLSR 737
>dbj|BAA83717.1| RNA binding protein [Homo sapiens]
Length = 1275
Score = 46.6 bits (109), Expect = 7e-04
Identities = 46/167 (27%), Positives = 71/167 (41%), Gaps = 1/167 (0%)
Frame = -1
Query: 871 PAKRSGKSGAAGHSTPQPRPP*QPSADKRGPRN-PLLTHSSRIE*RSVYTVQACQHRPTR 695
P R+ + G+ S+P+P+ + +R R+ P LT +R+ RS
Sbjct: 186 PKSRTARRGS--RSSPEPKTKSRTPPRRRSSRSSPELTRKARLSRRS------------- 230
Query: 694 FVQRPLSASARRAAALAASTKRRPRIPAPHTLCSAAASALRGRPTGHPSCSEPSAKPTRR 515
R S+S + +R P + +P + +S R S S P K T R
Sbjct: 231 ---RSASSSPETRSRTPPRHRRSPSVSSPEPAEKSRSSRRRR------SASSPRTKTTSR 281
Query: 514 RG*R*RPR*TAGSRTSGRSGR*RSRHRRA*RRACRTRSRSRRRARSR 374
RG P+ R+ RS R ++R R R+ ++S SRRR RSR
Sbjct: 282 RGRSPSPKPRGLQRSRSRSRREKTRTTRRRDRSGSSQSTSRRRQRSR 328
Score = 34.3 bits (77), Expect = 3.7
Identities = 52/170 (30%), Positives = 66/170 (38%), Gaps = 18/170 (10%)
Frame = -1
Query: 832 STPQPRPP*QPSADKRGP-RNPLLTHSSRIE*RSVYTVQACQHRPTRFVQRPLSASARRA 656
++PQ R S D + R PL S V + R +R P RA
Sbjct: 74 ASPQERSESDSSPDSKAKTRTPLRQRSRSGSSPEVDSKSRLSPRRSRSGSSPEVKDKPRA 133
Query: 655 AALAAS---TKRRPRIPAPHTLC--SAAASALRGR---PTGHPSC-SEPSAKP---TRRR 512
A A S + P+ PAP L S + S+ +GR P G S S P P T RR
Sbjct: 134 APRAQSGSDSSPEPKAPAPRALPRRSRSGSSSKGRGPSPEGSSSTESSPEHPPKSRTARR 193
Query: 511 G*R*RPR*TAGSRT-----SGRSGR*RSRHRRA*RRACRTRSRSRRRARS 377
G R P SRT S RS +R R RR+ S R+R+
Sbjct: 194 GSRSSPEPKTKSRTPPRRRSSRSSPELTRKARLSRRSRSASSSPETRSRT 243
Score = 33.9 bits (76), Expect = 4.8
Identities = 21/69 (30%), Positives = 27/69 (38%)
Frame = -2
Query: 285 RAPCEQRSRWSHPRGHRSGRRQPEHPPASRHQR*GQRRPSRPEAGPSSG*GWESRPAEPC 106
R+ + R P G S PEHPP SR R G R P+ + S + P
Sbjct: 160 RSGSSSKGRGPSPEGSSSTESSPEHPPKSRTARRGSRSSPEPKTKSRTPPRRRSSRSSPE 219
Query: 105 TTTARRATR 79
T R +R
Sbjct: 220 LTRKARLSR 228
