KCC000615A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC000615A_C01 KCC000615A_c01
TGCAGACGTCAAGACCAAGACGAATGGCCGCAGACACCTTCGCCTTCAGGGGGACGTTCT
TCCACACACCCGCCTACGGCCAGCTCGAGGCGCTGCGCGACGCCGTGGTGGTCATTCAAG
ATGGCAAGATTGCTCGCCTCGGCACCAGTGGCGACGAGGCCGCCCTGATGCGCGAGTTCG
GCCTGTCCGAAGTGCGCCGACTGAAGGAGGGTCAATACTTTGTCCCGGGCTTTATTGATA
CCCACGTTCACGCTCCTCAGTACAAATTCACCGGCACCGGCACTGATATTGCGCTGATGG
ACTGGCTCAAAAAGTACACCTTCCCGGCCGAGGGCTCCTTCCGCGACCTCGACGCCGCGC
ACCATCGCTACGCGCTGCTGGTGAAGCGCTTCCTGGCCAACGGCACCACCACCGCCATGT
ACTACGGCTCGCTGCACCTGGAGCCCAACCTCATCCTGGTGGACACCATCGAGCGACTGG
GCCAGCGCGCCGTCGTGGGCAAGGTGAACATGGACCGCCACTCGCCAGATGACTACGTGG
AGGCCACGTCCGACGGCATCCGTGACGCCGAGGAGTTCATCAAGTACACGCAGGGCAAGA
AATGCACACGCATCGAGCCCTGCATCACCCCCCGCTTCATCCCCACATGCACCCCCGAGC
TCATGAAGGGCCTGGCGTCGCTGGCTCAGAAGTACGGCACACACA


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC000615A_C01 KCC000615A_c01
         (705 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_113964.1| guanine deaminase [Rattus norvegicus] gi|991070...   187  2e-46
gb|AAF63337.1|AF245172_1 guanine deaminase [Rattus norvegicus]        187  2e-46
gb|AAM18374.1|AF369885_1 guanine deaminase [Mus spretus]              186  2e-46
ref|NP_034396.1| guanine deaminase [Mus musculus] gi|9910725|sp|...   186  4e-46
gb|AAO50910.1| similar to Rattus norvegicus (Rat). Guanine deami...   184  9e-46

>ref|NP_113964.1| guanine deaminase [Rattus norvegicus] gi|9910706|sp|Q9WTT6|GUAD_RAT
           Guanine deaminase (Guanase) (Guanine aminase) (Guanine
           aminohydrolase) (GAH) gi|4731644|gb|AAD15629.2| guanine
           aminohydrolase [Rattus norvegicus]
          Length = 454

 Score =  187 bits (474), Expect = 2e-46
 Identities = 93/221 (42%), Positives = 137/221 (61%), Gaps = 4/221 (1%)
 Frame = +3

Query: 45  FRGTFFHTPAYGQLEALRDAVVVIQD-GKIARLGTSGDEAALMRE--FGLSEVRRLKEGQ 215
           FRGTF H+     +E LRD ++ + D GKI  L  S  +  L +E  F   E+R L   +
Sbjct: 13  FRGTFVHSTWTCPMEVLRDHLLGVSDSGKIVFLEESSQQEKLAKEWCFKPCEIRELSHHE 72

Query: 216 YFVPGFIDTHVHAPQYKFTGTGTDIALMDWLKKYTFPAEGSFRDLDAAHHRYALLVKRFL 395
           +F+PG +DTH+HAPQY F G+  D+ L+DWL KYTFP E  F+  D A   Y  +V+R L
Sbjct: 73  FFMPGLVDTHIHAPQYAFAGSNVDLPLLDWLNKYTFPTEKRFQSTDVAEEVYTRVVRRTL 132

Query: 396 ANGTTTAMYYGSLHLEPNLILVDTIERLGQRAVVGKVNMD-RHSPDDYVEATSDGIRDAE 572
            NGTTTA Y+G++H + +LIL +  ++ GQRA VGKV MD  ++  +Y E T + +++ E
Sbjct: 133 KNGTTTACYFGTIHTDSSLILAEITDKFGQRAFVGKVCMDLNNTVPEYKETTEESVKETE 192

Query: 573 EFIKYTQGKKCTRIEPCITPRFIPTCTPELMKGLASLAQKY 695
            F+     K  +R++P +TPRF  +CT  LM  L ++A+ +
Sbjct: 193 RFVSEMLQKNYSRVKPIVTPRFSLSCTETLMSELGNIAKTH 233

>gb|AAF63337.1|AF245172_1 guanine deaminase [Rattus norvegicus]
          Length = 454

 Score =  187 bits (474), Expect = 2e-46
 Identities = 93/221 (42%), Positives = 137/221 (61%), Gaps = 4/221 (1%)
 Frame = +3

Query: 45  FRGTFFHTPAYGQLEALRDAVVVIQD-GKIARLGTSGDEAALMRE--FGLSEVRRLKEGQ 215
           FRGTF H+     +E LRD ++ + D GKI  L  S  +  L +E  F   E+R L   +
Sbjct: 13  FRGTFVHSTWTCPMEVLRDHLLGVSDSGKIVFLEESSQQEKLAKEWCFKPCEIRELSHHE 72

Query: 216 YFVPGFIDTHVHAPQYKFTGTGTDIALMDWLKKYTFPAEGSFRDLDAAHHRYALLVKRFL 395
           +F+PG +DTH+HAPQY F G+  D+ L+DWL KYTFP E  F+  D A   Y  +V+R L
Sbjct: 73  FFMPGLVDTHIHAPQYAFAGSNVDLPLLDWLNKYTFPTEKRFQSTDVAEEVYTRVVRRTL 132

Query: 396 ANGTTTAMYYGSLHLEPNLILVDTIERLGQRAVVGKVNMD-RHSPDDYVEATSDGIRDAE 572
            NGTTTA Y+G++H + +LIL +  ++ GQRA VGKV MD  ++  +Y E T + +++ E
Sbjct: 133 KNGTTTACYFGTIHTDSSLILAEITDKFGQRAFVGKVCMDLNNTVPEYKETTEESVKETE 192

Query: 573 EFIKYTQGKKCTRIEPCITPRFIPTCTPELMKGLASLAQKY 695
            F+     K  +R++P +TPRF  +CT  LM  L ++A+ +
Sbjct: 193 RFVSEMLQKNYSRVKPIVTPRFSLSCTETLMSELGNIAKTH 233

>gb|AAM18374.1|AF369885_1 guanine deaminase [Mus spretus]
          Length = 454

 Score =  186 bits (473), Expect = 2e-46
 Identities = 93/221 (42%), Positives = 136/221 (61%), Gaps = 4/221 (1%)
 Frame = +3

Query: 45  FRGTFFHTPAYGQLEALRDAVVVIQD-GKIARLGTSGDEAALMRE--FGLSEVRRLKEGQ 215
           FRGTF H+     +E LRD ++ + D GKI  L  S  +  L +E  F   E+R L   +
Sbjct: 13  FRGTFVHSTWTCPMEVLRDHLLGVSDSGKIVFLEESSQQEKLAKEWCFKPCEIRELSHHE 72

Query: 216 YFVPGFIDTHVHAPQYKFTGTGTDIALMDWLKKYTFPAEGSFRDLDAAHHRYALLVKRFL 395
           +F+PG +DTH+HAPQY F G+  D+ L++WL KYTFP E  FR  D A   Y  +V+R L
Sbjct: 73  FFMPGLVDTHIHAPQYAFAGSNVDLPLLEWLNKYTFPTEQRFRSTDVAEEVYTRVVRRTL 132

Query: 396 ANGTTTAMYYGSLHLEPNLILVDTIERLGQRAVVGKVNMD-RHSPDDYVEATSDGIRDAE 572
            NGTTTA Y+G++H + +LIL +  ++ GQRA VGKV MD  ++  +Y E T + +++ E
Sbjct: 133 KNGTTTACYFGTIHTDSSLILAEITDKFGQRAFVGKVCMDLNNTVPEYKETTEESVKETE 192

Query: 573 EFIKYTQGKKCTRIEPCITPRFIPTCTPELMKGLASLAQKY 695
            F+     K   R++P +TPRF  +CT  LM  L ++A+ +
Sbjct: 193 RFVSEMLQKNYPRVKPIVTPRFTLSCTETLMSELGNIAKTH 233

>ref|NP_034396.1| guanine deaminase [Mus musculus] gi|9910725|sp|Q9R111|GUAD_MOUSE
           Guanine deaminase (Guanase) (Guanine aminase) (Guanine
           aminohydrolase) (GAH)
           gi|5738216|gb|AAD50297.1|AF174583_1 guanine deaminase
           [Mus musculus] gi|20270686|gb|AAM18369.1|AF369880_1
           guanine deaminase [Mus musculus]
           gi|20270688|gb|AAM18370.1|AF369881_1 guanine deaminase
           [Mus musculus] gi|20270690|gb|AAM18371.1|AF369882_1
           guanine deaminase [Mus musculus]
           gi|20270692|gb|AAM18372.1|AF369883_1 guanine deaminase
           [Mus musculus molossinus]
           gi|20270694|gb|AAM18373.1|AF369884_1 guanine deaminase
           [Mus musculus castaneus] gi|26334169|dbj|BAC30802.1|
           unnamed protein product [Mus musculus]
          Length = 454

 Score =  186 bits (471), Expect = 4e-46
 Identities = 93/221 (42%), Positives = 135/221 (61%), Gaps = 4/221 (1%)
 Frame = +3

Query: 45  FRGTFFHTPAYGQLEALRDAVVVIQD-GKIARLGTSGDEAALMRE--FGLSEVRRLKEGQ 215
           FRGTF H+     +E LRD ++ + D GKI  L  S  +  L +E  F   E+R L   +
Sbjct: 13  FRGTFVHSTWTCPMEVLRDHLLGVSDSGKIVFLEESSQQEKLAKEWCFKPCEIRELSHHE 72

Query: 216 YFVPGFIDTHVHAPQYKFTGTGTDIALMDWLKKYTFPAEGSFRDLDAAHHRYALLVKRFL 395
           +F+PG +DTH+HAPQY F G+  D+ L++WL KYTFP E  FR  D A   Y  +V+R L
Sbjct: 73  FFMPGLVDTHIHAPQYAFAGSNVDLPLLEWLNKYTFPTEQRFRSTDVAEEVYTRVVRRTL 132

Query: 396 ANGTTTAMYYGSLHLEPNLILVDTIERLGQRAVVGKVNMD-RHSPDDYVEATSDGIRDAE 572
            NGTTTA Y+G++H + +LIL +  ++ GQRA VGKV MD   +  +Y E T + +++ E
Sbjct: 133 KNGTTTACYFGTIHTDSSLILAEITDKFGQRAFVGKVCMDLNDTVPEYKETTEESVKETE 192

Query: 573 EFIKYTQGKKCTRIEPCITPRFIPTCTPELMKGLASLAQKY 695
            F+     K   R++P +TPRF  +CT  LM  L ++A+ +
Sbjct: 193 RFVSEMLQKNYPRVKPIVTPRFTLSCTETLMSELGNIAKTH 233

>gb|AAO50910.1| similar to Rattus norvegicus (Rat). Guanine deaminase (EC 3.5.4.3)
           (Guanase) (Guanine aminase) (Guanine aminohydrolase)
           (GAH) [Dictyostelium discoideum]
          Length = 450

 Score =  184 bits (468), Expect = 9e-46
 Identities = 94/230 (40%), Positives = 140/230 (60%), Gaps = 11/230 (4%)
 Frame = +3

Query: 45  FRGTFFHTPAYGQLEALRDAVVVI-QDGKIARLGTS--------GDEAALMREFGLSEVR 197
           F+GT  H+   G++E L ++++ I +DG I  + ++         D   +  + G++E  
Sbjct: 11  FKGTVIHSIEIGKVEILPNSLIGIDEDGVIQHMKSNYEDLKQLEKDVTMICTDNGINEQE 70

Query: 198 RLKE--GQYFVPGFIDTHVHAPQYKFTGTGTDIALMDWLKKYTFPAEGSFRDLDAAHHRY 371
            + +   ++ +PGFIDTH HAPQY   GTGTD+ L+ WL+KYTFP E  F+DL  A + Y
Sbjct: 71  SVIDMGNKFLIPGFIDTHAHAPQYHNAGTGTDLPLLKWLEKYTFPVESKFKDLIFAENVY 130

Query: 372 ALLVKRFLANGTTTAMYYGSLHLEPNLILVDTIERLGQRAVVGKVNMDRHSPDDYVEATS 551
             +V R L +GTTT  YY ++HLE + +L + + + GQRA +GKV MDRHSPD YVE T 
Sbjct: 131 GKVVDRMLRHGTTTCCYYATIHLEASELLAEIVSKRGQRAFIGKVCMDRHSPDHYVETTE 190

Query: 552 DGIRDAEEFIKYTQGKKCTRIEPCITPRFIPTCTPELMKGLASLAQKYGT 701
             I + +EF+     K    ++P +TPRF P+CT ELM  L +L+ +  T
Sbjct: 191 QSISNTKEFVDRILAKGNPLVQPIVTPRFAPSCTDELMVALGNLSHEKQT 240



EST assemble image


clone accession position
1 LC083c03_r AV624823 1 445
2 LCL077a02_r AV630305 1 438
3 MXL054b03_r BP096178 1 463
4 LCL033f04_r AV627900 12 538
5 HCL086c05_r AV644319 19 488
6 LCL013b07_r AV626660 31 245
7 CL48d07_r AV395813 35 547
8 MXL078a12_r BP097584 162 379
9 LCL054h04_r AV629230 222 705




Chlamydomonas reinhardtii
Kazusa DNA Research Institute