Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC000574A_C01 KCC000574A_c01
(1002 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_767161.1| blr0521 [Bradyrhizobium japonicum] gi|27348769|... 37 4e-05
ref|XP_305466.1| hypothetical protein XP_305466 [Homo sapiens] 50 5e-05
ref|NP_630763.1| conserved hypothetical protein [Streptomyces co... 49 1e-04
ref|NP_883796.1| flagellar hook-length control protein [Bordetel... 49 2e-04
sp|Q63537|SYN2_RAT Synapsin II gi|112349|pir||C30411 synapsin II... 47 4e-04
>ref|NP_767161.1| blr0521 [Bradyrhizobium japonicum] gi|27348769|dbj|BAC45786.1|
blr0521 [Bradyrhizobium japonicum USDA 110]
Length = 745
Score = 37.4 bits (85), Expect(2) = 4e-05
Identities = 26/66 (39%), Positives = 26/66 (39%), Gaps = 13/66 (19%)
Frame = -1
Query: 330 PARHLPSCPAFMPQSCTTPRCSLKAVPSSARRPPASA--------APTATPCP-----PP 190
PA P P P TTP A P S R PAS APTATP P PP
Sbjct: 265 PAAGSPPAPGATPAPTTTPAPGGTATPPSGRPGPASTPAPGAATPAPTATPAPGGALTPP 324
Query: 189 ASMPSA 172
P A
Sbjct: 325 PGRPGA 330
Score = 36.6 bits (83), Expect = 0.70
Identities = 25/76 (32%), Positives = 33/76 (42%), Gaps = 6/76 (7%)
Frame = -1
Query: 330 PARHLPSCPAFMPQSC----TTPRCSLKAVPSSARRPPA--SAAPTATPCPPPASMPSAK 169
P +H P+ P P + T P A P A PP +A PT TP PPP + P+A+
Sbjct: 129 PQQHAPTPPPPAPPAARPAPTPPAPPPAAAPQHAPPPPPPPAARPTPTPPPPPPAGPAAR 188
Query: 168 SQLHSSAARATAAAAP 121
+A A P
Sbjct: 189 PTPAPTATPTPVAPPP 204
Score = 36.2 bits (82), Expect = 0.91
Identities = 25/77 (32%), Positives = 33/77 (42%), Gaps = 1/77 (1%)
Frame = -1
Query: 348 SRALVTPARHLPSCPAFMPQSCTTPRCSLKAVPSSARRP-PASAAPTATPCPPPASMPSA 172
+R TP P+ PA P T + A P +A P S AP ATP P P P+A
Sbjct: 171 ARPTPTPPPPPPAGPAARPTPAPTATPTPVAPPPAAPTARPGSPAPAATPAPTPTPAPTA 230
Query: 171 KSQLHSSAARATAAAAP 121
++ A + AP
Sbjct: 231 TPAPTATPAPGSTPGAP 247
Score = 35.4 bits (80), Expect = 1.6
Identities = 21/60 (35%), Positives = 27/60 (45%), Gaps = 3/60 (5%)
Frame = -1
Query: 342 ALVTPARHLPSCPAFMPQS---CTTPRCSLKAVPSSARRPPASAAPTATPCPPPASMPSA 172
A TP P+ P P S TP + P++ P A+ AP +TP PPA P A
Sbjct: 195 ATPTPVAPPPAAPTARPGSPAPAATPAPTPTPAPTATPAPTATPAPGSTPGAPPAGRPGA 254
Score = 35.0 bits (79), Expect = 2.0
Identities = 25/78 (32%), Positives = 33/78 (42%), Gaps = 1/78 (1%)
Frame = -1
Query: 351 PSR-ALVTPARHLPSCPAFMPQSCTTPRCSLKAVPSSARRPPASAAPTATPCPPPASMPS 175
P+R A PA P PA P + PR + P PP +A P P PPP + P
Sbjct: 64 PARPAAPPPAAAPPHPPAAPPPAAAPPRPAAPPPPP----PPPAARPAPPPPPPPPAAPK 119
Query: 174 AKSQLHSSAARATAAAAP 121
S ++A + A P
Sbjct: 120 QPSPPPAAAPQQHAPTPP 137
Score = 33.5 bits (75), Expect = 5.9
Identities = 31/87 (35%), Positives = 35/87 (39%), Gaps = 10/87 (11%)
Frame = -1
Query: 351 PSRALVTPARHLPSCPAFMPQSCTTPRCSLKAVPSSARRPPASA--------APTATPCP 196
P A P P PA PQ P A P+ PP A APTATP P
Sbjct: 141 PPAARPAPTPPAPP-PAAAPQHAPPPPPPPAARPTPTPPPPPPAGPAARPTPAPTATPTP 199
Query: 195 --PPASMPSAKSQLHSSAARATAAAAP 121
PP + P+A+ S A AT A P
Sbjct: 200 VAPPPAAPTARP--GSPAPAATPAPTP 224
Score = 32.7 bits (73), Expect(2) = 4e-05
Identities = 33/128 (25%), Positives = 39/128 (29%)
Frame = -3
Query: 697 QAARVPAFRPQYTCTNPPTPLSHSFRP*PALTAPQPRAAQVTRAQAAL*VSHGPSSQIVP 518
Q + PA PQ PP P + RP P AP P AA H P P
Sbjct: 120 QPSPPPAAAPQQHAPTPPPPAPPAARPAPTPPAPPPAAAP----------QHAPPPPPPP 169
Query: 517 DYQD*ARSLTRISTIPPQP*VQAECAQAANKLSGNLRFCFAAAASTAAPGAPLAVSQSGA 338
+ T PP P + AA TA PG+P +
Sbjct: 170 -------AARPTPTPPPPPPAGPAARPTPAPTATPTPVAPPPAAPTARPGSPAPAATPAP 222
Query: 337 CNTSTPPA 314
T P A
Sbjct: 223 TPTPAPTA 230
>ref|XP_305466.1| hypothetical protein XP_305466 [Homo sapiens]
Length = 331
Score = 50.4 bits (119), Expect = 5e-05
Identities = 40/118 (33%), Positives = 58/118 (48%), Gaps = 3/118 (2%)
Frame = -1
Query: 450 PSARKPQTS---SPATCASALLRQPARLLLGHHWQFPSRALVTPARHLPSCPAFMPQSCT 280
P+A P T+ S AT S + P +L P A + P LPS A +P + T
Sbjct: 54 PTATLPPTATLPSTATLPSTVTLPPTVVL-------PPTATLPPTATLPST-ATLPSTAT 105
Query: 279 TPRCSLKAVPSSARRPPASAAPTATPCPPPASMPSAKSQLHSSAARATAAAAPLMLAI 106
P S +PS+A PP + P PP A++PS + L S+AA + AA P ++A+
Sbjct: 106 LP--STATLPSTATLPPTATLPPTVALPPTATLPSTAALL-STAALLSTAALPSIVAL 160
Score = 36.2 bits (82), Expect = 0.91
Identities = 34/115 (29%), Positives = 51/115 (43%)
Frame = -1
Query: 450 PSARKPQTSSPATCASALLRQPARLLLGHHWQFPSRALVTPARHLPSCPAFMPQSCTTPR 271
P+A P T++ + A+ P+ L PS A + P LP A +P + T P
Sbjct: 84 PTATLPPTATLPSTATL----PSTATLPSTATLPSTATLPPTATLPPTVA-LPPTATLP- 137
Query: 270 CSLKAVPSSARRPPASAAPTATPCPPPASMPSAKSQLHSSAARATAAAAPLMLAI 106
S A+ S+A +A P+ PP PS + L S+ A AA P +A+
Sbjct: 138 -STAALLSTAALLSTAALPSIVALPPTVEQPST-ATLPSTVALPLTAALPSTVAL 190
Score = 35.0 bits (79), Expect = 2.0
Identities = 20/62 (32%), Positives = 27/62 (43%), Gaps = 3/62 (4%)
Frame = -1
Query: 351 PSRALVTPARHLPSCPAFMPQSCTTPRCSL---KAVPSSARRPPASAAPTATPCPPPASM 181
P A + LPS P + P +L A+PS+ PP A P PP A++
Sbjct: 5 PPTATLPSTATLPSTATLPPTATLPPTATLLSTAALPSTVALPPTVALPPTATLPPTATL 64
Query: 180 PS 175
PS
Sbjct: 65 PS 66
>ref|NP_630763.1| conserved hypothetical protein [Streptomyces coelicolor A3(2)]
gi|7479699|pir||T35549 hypothetical protein SC6G3.05 -
Streptomyces coelicolor gi|5457290|emb|CAB46977.1|
conserved hypothetical protein [Streptomyces coelicolor
A3(2)]
Length = 588
Score = 49.3 bits (116), Expect = 1e-04
Identities = 38/117 (32%), Positives = 50/117 (42%)
Frame = -1
Query: 351 PSRALVTPARHLPSCPAFMPQSCTTPRCSLKAVPSSARRPPASAAPTATPCPPPASMPSA 172
PS + +P + C + C +L A P + PPA A P PA PSA
Sbjct: 71 PSGTITSPDQ--AHCTCLLSPRCLHRAAALGAAPVADPAPPAGTALPTAPVALPARGPSA 128
Query: 171 KSQLHSSAARATAAAAPLMLAILQSGVAAGLQLVDQTHVACLHDLAGLHDVHEVGLD 1
Q+ ++ TAAAA L I +G A +L+ H A LAGLH LD
Sbjct: 129 -GQVRAAEGLWTAAAAVLAAGITAAGAVARAELLRAAHTA---RLAGLHRAEGAALD 181
>ref|NP_883796.1| flagellar hook-length control protein [Bordetella parapertussis]
gi|33573156|emb|CAE36807.1| flagellar hook-length
control protein [Bordetella parapertussis]
Length = 438
Score = 48.5 bits (114), Expect = 2e-04
Identities = 48/150 (32%), Positives = 61/150 (40%), Gaps = 7/150 (4%)
Frame = -1
Query: 480 PRYRLSRRSRPSARKPQTSSPATCASALLRQPARL-LLGHHWQFPSRALVTPARHLPSCP 304
P L + +A Q ++ A A RQPA LL P+ A PA P+ P
Sbjct: 125 PLQALEIAAEAAAVNAQVAAATQAAGAAARQPAHAALLAGQPAAPAAAGAPPADTAPAMP 184
Query: 303 AFMPQSCTTPRCSLKAVPSSARRPPA---SAAPTATP-CPPPASMPSAKSQLHSSAAR-- 142
+PQ+ + AV +SA PA +A P A P P P Q AA
Sbjct: 185 PALPQAAQPAVAAQAAVAASAPNAPAAETAATPPAAPSLPHPLPSTGGTPQDGGEAAEPP 244
Query: 141 ATAAAAPLMLAILQSGVAAGLQLVDQTHVA 52
ATA A P LA + G A L Q H+A
Sbjct: 245 ATAPAQPQPLAAAEHG--AALHAAAQAHIA 272
>sp|Q63537|SYN2_RAT Synapsin II gi|112349|pir||C30411 synapsin IIa - rat
gi|206834|gb|AAA42100.1| synapsin 2a
Length = 586
Score = 47.4 bits (111), Expect = 4e-04
Identities = 34/89 (38%), Positives = 42/89 (46%), Gaps = 6/89 (6%)
Frame = -1
Query: 306 PAFMPQSCTTPRCSLKAVPSSARRPPASAAPTATPCPPPASMPSAKSQLHSS---AARAT 136
PA P + T + A P RRPP + AP P P PA PS S SS A + T
Sbjct: 36 PAPGPGTATASAATSAASPGPERRPPPAQAPAPQPAPQPAPTPSVGSSFFSSLSQAVKQT 95
Query: 135 AAAAPLMLAILQSGV---AAGLQLVDQTH 58
AA+A L+ A S A L +VD+ H
Sbjct: 96 AASAGLVDAPAPSAASRKAKVLLVVDEPH 124
