KCC000559A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC000559A_C01 KCC000559A_c01
cgagtccgcgtcgagctgttAGCAACCATGGCTTTCACTATGCGCGCCCCCGCCCCCCGG
GCTACGGCCCAGAGCCGCGTGACTGCCAACCGGGCTCGTCGCAGCCTGGTTGTGCGCGCT
GATAAGGACAAGACCGTGGTGATCGGTCTGGCCGCTGACTCCGGCTGCGGCAAGTCCACC
TTCATGCGCCGCATGACCTCCATCTTCGGCGGTGTCCCCAAGCCCCCGGCTGGCGGCAAC
CCCGACTCCAACACCCTGATCTCGGACATGACCACCGTGATCTGCCTGGACGACTACCAC
TGCCTGGACCGCAACGGCCGCAAGGTCAAGGGCGTTACCGCCCTGGCCCCCGAGGCCCAG
AACTTCGACCTGATGTACAACCAGGTCAATGCCCTGAAGGAGGGCAAGTCGGTGGACAAG
CCCATCTACAACCACGTGTCCGGCCTGATCGACGCGCCCGAGAAGATCGAGTCGCCCCCG
ATCCTGGTCATTGAGGGCCTGCACCCCTTCTACGACAAGCGCGTGGCTGAGCTGCTGGAC
TTCAAGATCTACCTGGACATCTCCGACGACATCAAGTTCGCCTGGAAGATTCAGCGCGAC
ATGGCCGAGCGCGGCCACTCGCTGGAGTCGATCAAGAGCTCGATCGCGGCGCGCAAGCCC
GACTTCGATGCCTACATTGACCCCCAGAAGAAGGACGCTGACATGATCATCCAGGTTGCT
GCCCACCCAGCTGGTGCCTGACGACAAGGGCCAGTACCTGCGCGTGCGCCTGATCATGAA
GGAGGGCTCCAAGATGTTCGACCCCGTCTACCTGTTCGACGAGGGCTCGACCATCAGCTG
GATCCCCTGCGGCCGCAAGCTGACCTGCTCGTTCCCCGGCATCAAGATGTTCTACGGCCC
CGACACCTGGTACGGCCAGGAGGTGTCCGTCCTGGAGATGGACGGCCAGTTCGACAAGCT
GGAGGAGCTCATCTACGTGGAGAGCCACCTGTCCAACACCAGCGCCAAGTTCTACGGCGA
GATCACCCAGCAGATGCTCAAGAACAGCGGCTTCCCCGGCTCCAACAACGGCACTGGCCT
GTTCCAGACCATTGTGGGCCTGAAGGTGCGCGAGGTGTACGAGCGCATCGTCAAGAAGGA
CGTTGTGCCCGTGTAAATGGGTCCGTTCTACCGGCGTACATAGCGGCGGCGGGCGCAGCG
GGAGTGCTGGCGGCAGCGAGCGGGCCCCGCCCCTTGGAATGCCACGCGCCTGTCGAACCG
GCGGCGGTGCGCGAGCACTGCTGCTGGCGCCGACGGCTCGCGGCGGCGGGGGAGCAGTTG
CTTTGGCACCTCAGTCGCCTGATTGTTAGCTGTAGCTGTGGTGGACGACCTTCGAGCGGC
AGGTTGCTACTGTTGTTAAGCCTTTGCCTTGATTTTTTTCGTGGGCGAGGCCGGGGGCCG
GTGCCGGCCGCCGCCTAGCGTTTTGGCGGCCTGGCGCGTTTTTGCATTCGCGCGCCGGTT
GGCCTGCTGCTGGCGGTGGGCGGTGCCGGTTGTGGATTGTTGAGGGCCGGCCTGGCATTC
ACTGTCCGGCGGCTAGCAAGGTGGATGCGCGGGGAGCAGGAGGAGGTTTCAACTAGCCCG
GCTGTCGCGGGACTGGGTGTTGTACCAAACATGGCCGAAATGGCCCCCGTCAGGCGAGGG
GTGGTTTTGCCGCCGGCGGTTATCTGTATCGGGGAGGAACGCGTTGCGATGCGCTGTTGC
GCCCCTCGTGCCTCCGTCGTCGAGTGGAGATGGTGTTTGGTTTGTGTTCTGTCGGACCGT
GTGTGAGAGAAGAGGAGAGCTTGCATATCCCGAAGCGTCGTCAAGTAAGAaatttgacgt
gcgcaacatgtaaacttaaaatctgaaaaaaaaaaaaaaaaaaaaaaactcgagactagt
tctctcgtgc


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC000559A_C01 KCC000559A_c01
         (1930 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

gb|AAA34036.1| phosphoribulokinase precursor (EC 2.7.1.19)            329  e-150
sp|P09559|KPPR_SPIOL Phosphoribulokinase, chloroplast precursor ...   329  e-150
gb|AAM94337.2| phosphoribulokinase precursor [Oryza sativa (indi...   322  e-150
pir||S16585 phosphoribulokinase (EC 2.7.1.19) - wheat                 317  e-150
sp|P26302|KPPR_WHEAT Phosphoribulokinase, chloroplast precursor ...   317  e-150

>gb|AAA34036.1| phosphoribulokinase precursor (EC 2.7.1.19)
          Length = 407

 Score =  329 bits (844), Expect(2) = e-150
 Identities = 159/220 (72%), Positives = 185/220 (83%)
 Frame = +1

Query: 58  RATAQSRVTANRARRSLVVRADKDKTVVIGLAADSGCGKSTFMRRMTSIFGGVPKPPAGG 237
           + ++ S  T    R S V+   + +T+VIGLAADSGCGKSTFMRR+TS+FGG  +PP GG
Sbjct: 36  KRSSSSNNTLFTTRPSYVITCSQQQTIVIGLAADSGCGKSTFMRRLTSVFGGAAEPPKGG 95

Query: 238 NPDSNTLISDMTTVICLDDYHCLDRNGRKVKGVTALAPEAQNFDLMYNQVNALKEGKSVD 417
           NPDSNTLISD TTVICLDD+H LDRNGRKV+ VTAL P+A +FDLMY QV ALKEGK+VD
Sbjct: 96  NPDSNTLISDTTTVICLDDFHSLDRNGRKVEKVTALDPKANDFDLMYEQVKALKEGKAVD 155

Query: 418 KPIYNHVSGLIDAPEKIESPPILVIEGLHPFYDKRVAELLDFKIYLDISDDIKFAWKIQR 597
           KPIYNHVSGL+D PE I+ P ILVIEGLHP YD RV ELLDF IYLDIS+++KFAWKIQR
Sbjct: 156 KPIYNHVSGLLDPPELIQPPKILVIEGLHPMYDARVRELLDFSIYLDISNEVKFAWKIQR 215

Query: 598 DMAERGHSLESIKSSIAARKPDFDAYIDPQKKDADMIIQV 717
           DM ERGHSLESIK+SI +RKPDFDAYIDPQK+ AD++I+V
Sbjct: 216 DMKERGHSLESIKASIESRKPDFDAYIDPQKQHADVVIEV 255

 Score =  228 bits (582), Expect(2) = e-150
 Identities = 104/140 (74%), Positives = 126/140 (89%), Gaps = 1/140 (0%)
 Frame = +2

Query: 716  LLPTQLVPDD-KGQYLRVRLIMKEGSKMFDPVYLFDEGSTISWIPCGRKLTCSFPGIKMF 892
            +LPT+L+PDD +G+ LRVR+I KEG K F+PVYLFDEGSTISWIPCGRKLTCS+PGIK  
Sbjct: 255  VLPTELIPDDDEGKVLRVRMIQKEGVKFFNPVYLFDEGSTISWIPCGRKLTCSYPGIKFS 314

Query: 893  YGPDTWYGQEVSVLEMDGQFDKLEELIYVESHLSNTSAKFYGEITQQMLKNSGFPGSNNG 1072
            YGPDT+YG EV+V+EMDG FD+L+ELIYVESHLSN S KFYGE+TQQMLK+  FPGSNNG
Sbjct: 315  YGPDTFYGNEVTVVEMDGMFDRLDELIYVESHLSNLSTKFYGEVTQQMLKHQNFPGSNNG 374

Query: 1073 TGLFQTIVGLKVREVYERIV 1132
            TG FQTI+GLK+R+++E++V
Sbjct: 375  TGFFQTIIGLKIRDLFEQLV 394

>sp|P09559|KPPR_SPIOL Phosphoribulokinase, chloroplast precursor (Phosphopentokinase)
           (PRKASE) (PRK) gi|81469|pir||S02099 phosphoribulokinase
           (EC 2.7.1.19) precursor - spinach
           gi|21279|emb|CAA30499.1| phosphoribulokinase [Spinacia
           oleracea] gi|226109|prf||1410321A phosphoribulokinase
          Length = 402

 Score =  329 bits (844), Expect(2) = e-150
 Identities = 159/220 (72%), Positives = 185/220 (83%)
 Frame = +1

Query: 58  RATAQSRVTANRARRSLVVRADKDKTVVIGLAADSGCGKSTFMRRMTSIFGGVPKPPAGG 237
           + ++ S  T    R S V+   + +T+VIGLAADSGCGKSTFMRR+TS+FGG  +PP GG
Sbjct: 31  KRSSSSNNTLFTTRPSYVITCSQQQTIVIGLAADSGCGKSTFMRRLTSVFGGAAEPPKGG 90

Query: 238 NPDSNTLISDMTTVICLDDYHCLDRNGRKVKGVTALAPEAQNFDLMYNQVNALKEGKSVD 417
           NPDSNTLISD TTVICLDD+H LDRNGRKV+ VTAL P+A +FDLMY QV ALKEGK+VD
Sbjct: 91  NPDSNTLISDTTTVICLDDFHSLDRNGRKVEKVTALDPKANDFDLMYEQVKALKEGKAVD 150

Query: 418 KPIYNHVSGLIDAPEKIESPPILVIEGLHPFYDKRVAELLDFKIYLDISDDIKFAWKIQR 597
           KPIYNHVSGL+D PE I+ P ILVIEGLHP YD RV ELLDF IYLDIS+++KFAWKIQR
Sbjct: 151 KPIYNHVSGLLDPPELIQPPKILVIEGLHPMYDARVRELLDFSIYLDISNEVKFAWKIQR 210

Query: 598 DMAERGHSLESIKSSIAARKPDFDAYIDPQKKDADMIIQV 717
           DM ERGHSLESIK+SI +RKPDFDAYIDPQK+ AD++I+V
Sbjct: 211 DMKERGHSLESIKASIESRKPDFDAYIDPQKQHADVVIEV 250

 Score =  228 bits (582), Expect(2) = e-150
 Identities = 104/140 (74%), Positives = 126/140 (89%), Gaps = 1/140 (0%)
 Frame = +2

Query: 716  LLPTQLVPDD-KGQYLRVRLIMKEGSKMFDPVYLFDEGSTISWIPCGRKLTCSFPGIKMF 892
            +LPT+L+PDD +G+ LRVR+I KEG K F+PVYLFDEGSTISWIPCGRKLTCS+PGIK  
Sbjct: 250  VLPTELIPDDDEGKVLRVRMIQKEGVKFFNPVYLFDEGSTISWIPCGRKLTCSYPGIKFS 309

Query: 893  YGPDTWYGQEVSVLEMDGQFDKLEELIYVESHLSNTSAKFYGEITQQMLKNSGFPGSNNG 1072
            YGPDT+YG EV+V+EMDG FD+L+ELIYVESHLSN S KFYGE+TQQMLK+  FPGSNNG
Sbjct: 310  YGPDTFYGNEVTVVEMDGMFDRLDELIYVESHLSNLSTKFYGEVTQQMLKHQNFPGSNNG 369

Query: 1073 TGLFQTIVGLKVREVYERIV 1132
            TG FQTI+GLK+R+++E++V
Sbjct: 370  TGFFQTIIGLKIRDLFEQLV 389

>gb|AAM94337.2| phosphoribulokinase precursor [Oryza sativa (indica
           cultivar-group)] gi|23305934|gb|AAN17353.1|
           phosphoribulokinase precursor [Oryza sativa (indica
           cultivar-group)]
          Length = 403

 Score =  322 bits (826), Expect(2) = e-150
 Identities = 154/206 (74%), Positives = 176/206 (84%)
 Frame = +1

Query: 100 RSLVVRADKDKTVVIGLAADSGCGKSTFMRRMTSIFGGVPKPPAGGNPDSNTLISDMTTV 279
           R+  V    DK VVIGLAADSGCGKSTFMRR+TS+FGG  +PP GGNPDSNTLISD TTV
Sbjct: 46  RTFQVSCSVDKPVVIGLAADSGCGKSTFMRRLTSVFGGAAEPPKGGNPDSNTLISDTTTV 105

Query: 280 ICLDDYHCLDRNGRKVKGVTALAPEAQNFDLMYNQVNALKEGKSVDKPIYNHVSGLIDAP 459
           ICLDDYH LDR GRK KGVTAL P A +FDLMY QV A+KEGK+++KPIYNHV+GL+D P
Sbjct: 106 ICLDDYHSLDRTGRKEKGVTALDPRANDFDLMYEQVKAIKEGKAIEKPIYNHVTGLLDPP 165

Query: 460 EKIESPPILVIEGLHPFYDKRVAELLDFKIYLDISDDIKFAWKIQRDMAERGHSLESIKS 639
           E I+ P I VIEGLHP +D+RV +LLDF IYLDISD++KFAWKIQRDMAERGHSLESIK+
Sbjct: 166 ELIQPPKIFVIEGLHPMFDERVRDLLDFSIYLDISDEVKFAWKIQRDMAERGHSLESIKA 225

Query: 640 SIAARKPDFDAYIDPQKKDADMIIQV 717
           SI ARKPDFDA+IDPQK+ AD +I+V
Sbjct: 226 SIEARKPDFDAFIDPQKQYADAVIEV 251

 Score =  234 bits (597), Expect(2) = e-150
 Identities = 108/140 (77%), Positives = 130/140 (92%), Gaps = 1/140 (0%)
 Frame = +2

Query: 716  LLPTQLVPDD-KGQYLRVRLIMKEGSKMFDPVYLFDEGSTISWIPCGRKLTCSFPGIKMF 892
            +LPTQL+PDD +G+ LRV+LIMKEG K F+PVYLFDEGS+I+W+PCGRKLTCS+PGIK  
Sbjct: 251  VLPTQLIPDDNEGKVLRVKLIMKEGVKNFNPVYLFDEGSSITWVPCGRKLTCSYPGIKFA 310

Query: 893  YGPDTWYGQEVSVLEMDGQFDKLEELIYVESHLSNTSAKFYGEITQQMLKNSGFPGSNNG 1072
            YGPDT++G EVSVLEMDGQFD+L+ELIYVESHLSN S KFYGE+TQQMLK++ FPGSNNG
Sbjct: 311  YGPDTYFGHEVSVLEMDGQFDRLDELIYVESHLSNLSTKFYGEVTQQMLKHADFPGSNNG 370

Query: 1073 TGLFQTIVGLKVREVYERIV 1132
            TGLFQTIVGLK+R++YE+I+
Sbjct: 371  TGLFQTIVGLKIRDLYEQII 390

>pir||S16585 phosphoribulokinase (EC 2.7.1.19) - wheat
          Length = 404

 Score =  317 bits (812), Expect(2) = e-150
 Identities = 152/214 (71%), Positives = 177/214 (82%)
 Frame = +1

Query: 76  RVTANRARRSLVVRADKDKTVVIGLAADSGCGKSTFMRRMTSIFGGVPKPPAGGNPDSNT 255
           R       R+  V    ++ +VIGLAADSGCGKSTFMRR+TS+FGG  +PP GGNPDSNT
Sbjct: 39  RSNTRHGARTFQVSCAVEQPIVIGLAADSGCGKSTFMRRLTSVFGGAAEPPKGGNPDSNT 98

Query: 256 LISDMTTVICLDDYHCLDRNGRKVKGVTALAPEAQNFDLMYNQVNALKEGKSVDKPIYNH 435
           LISD TTVICLDDYH LDR GRK KGVTAL P+A +FDLMY QV A+KEGK+++KPIYNH
Sbjct: 99  LISDTTTVICLDDYHSLDRTGRKEKGVTALDPKANDFDLMYEQVKAIKEGKAIEKPIYNH 158

Query: 436 VSGLIDAPEKIESPPILVIEGLHPFYDKRVAELLDFKIYLDISDDIKFAWKIQRDMAERG 615
           V+GL+D  E I+ P I VIEGLHP YD+RV ELLDF IYLDIS+++KFAWKIQRDMAERG
Sbjct: 159 VTGLLDPAELIQPPKIFVIEGLHPMYDERVRELLDFSIYLDISNEVKFAWKIQRDMAERG 218

Query: 616 HSLESIKSSIAARKPDFDAYIDPQKKDADMIIQV 717
           HSLESIK+SI ARKPDFDA+IDPQK+ AD +I+V
Sbjct: 219 HSLESIKASIEARKPDFDAFIDPQKQYADAVIEV 252

 Score =  239 bits (609), Expect(2) = e-150
 Identities = 111/140 (79%), Positives = 131/140 (93%), Gaps = 1/140 (0%)
 Frame = +2

Query: 716  LLPTQLVPDD-KGQYLRVRLIMKEGSKMFDPVYLFDEGSTISWIPCGRKLTCSFPGIKMF 892
            +LPTQL+PDD +G+ LRV+LIMKEG K F+PVYLFDEGSTI+WIPCGRKLTCS+PGIK  
Sbjct: 252  VLPTQLIPDDNEGKVLRVKLIMKEGIKFFNPVYLFDEGSTINWIPCGRKLTCSYPGIKFS 311

Query: 893  YGPDTWYGQEVSVLEMDGQFDKLEELIYVESHLSNTSAKFYGEITQQMLKNSGFPGSNNG 1072
            YGPDT++GQEVSVLEMDGQFD+L+ELIYVESHLSN S KFYGE+TQQMLK++ FPGSNNG
Sbjct: 312  YGPDTYFGQEVSVLEMDGQFDRLDELIYVESHLSNLSTKFYGEVTQQMLKHADFPGSNNG 371

Query: 1073 TGLFQTIVGLKVREVYERIV 1132
            TGLFQTIVGLK+R++YE+I+
Sbjct: 372  TGLFQTIVGLKIRDLYEQII 391

>sp|P26302|KPPR_WHEAT Phosphoribulokinase, chloroplast precursor (Phosphopentokinase)
           (PRKASE) (PRK) gi|100839|pir||S15743 phosphoribulokinase
           (EC 2.7.1.19) - wheat gi|5924030|emb|CAB56544.1|
           phosphoribulokinase [Triticum aestivum]
          Length = 404

 Score =  317 bits (812), Expect(2) = e-150
 Identities = 152/214 (71%), Positives = 177/214 (82%)
 Frame = +1

Query: 76  RVTANRARRSLVVRADKDKTVVIGLAADSGCGKSTFMRRMTSIFGGVPKPPAGGNPDSNT 255
           R       R+  V    ++ +VIGLAADSGCGKSTFMRR+TS+FGG  +PP GGNPDSNT
Sbjct: 39  RSNTRHGARTFQVSCAVEQPIVIGLAADSGCGKSTFMRRLTSVFGGAAEPPKGGNPDSNT 98

Query: 256 LISDMTTVICLDDYHCLDRNGRKVKGVTALAPEAQNFDLMYNQVNALKEGKSVDKPIYNH 435
           LISD TTVICLDDYH LDR GRK KGVTAL P+A +FDLMY QV A+KEGK+++KPIYNH
Sbjct: 99  LISDTTTVICLDDYHSLDRTGRKEKGVTALDPKANDFDLMYEQVKAIKEGKAIEKPIYNH 158

Query: 436 VSGLIDAPEKIESPPILVIEGLHPFYDKRVAELLDFKIYLDISDDIKFAWKIQRDMAERG 615
           V+GL+D  E I+ P I VIEGLHP YD+RV ELLDF IYLDIS+++KFAWKIQRDMAERG
Sbjct: 159 VTGLLDPAELIQPPKIFVIEGLHPMYDERVRELLDFSIYLDISNEVKFAWKIQRDMAERG 218

Query: 616 HSLESIKSSIAARKPDFDAYIDPQKKDADMIIQV 717
           HSLESIK+SI ARKPDFDA+IDPQK+ AD +I+V
Sbjct: 219 HSLESIKASIEARKPDFDAFIDPQKQYADAVIEV 252

 Score =  239 bits (609), Expect(2) = e-150
 Identities = 111/140 (79%), Positives = 131/140 (93%), Gaps = 1/140 (0%)
 Frame = +2

Query: 716  LLPTQLVPDD-KGQYLRVRLIMKEGSKMFDPVYLFDEGSTISWIPCGRKLTCSFPGIKMF 892
            +LPTQL+PDD +G+ LRV+LIMKEG K F+PVYLFDEGSTI+WIPCGRKLTCS+PGIK  
Sbjct: 252  VLPTQLIPDDNEGKVLRVKLIMKEGIKFFNPVYLFDEGSTINWIPCGRKLTCSYPGIKFS 311

Query: 893  YGPDTWYGQEVSVLEMDGQFDKLEELIYVESHLSNTSAKFYGEITQQMLKNSGFPGSNNG 1072
            YGPDT++GQEVSVLEMDGQFD+L+ELIYVESHLSN S KFYGE+TQQMLK++ FPGSNNG
Sbjct: 312  YGPDTYFGQEVSVLEMDGQFDRLDELIYVESHLSNLSTKFYGEVTQQMLKHADFPGSNNG 371

Query: 1073 TGLFQTIVGLKVREVYERIV 1132
            TGLFQTIVGLK+R++YE+I+
Sbjct: 372  TGLFQTIVGLKIRDLYEQII 391



EST assemble image


clone accession position
1 MXL034e04_r BP095016 1 410
2 CM029e09_r AV389337 14 579
3 MX253f10_r BP092401 270 780
4 CM076g08_r AV391701 326 916
5 HC090d05_r AV638756 358 789
6 CM065b04_r AV391109 370 950
7 CM041e04_r AV389413 370 924
8 MX060f09_r BP088444 384 848
9 HC068c09_r AV637072 431 945
10 LC027h03_r AV620865 464 842
11 MX224g02_r BP090491 486 786
12 MX249a09_r BP092049 488 1059
13 HC003e09_r AV632072 563 1090
14 CM039b02_r AV388936 569 892
15 HC057a11_r AV636252 571 988
16 MX223e05_r BP090405 598 880
17 LC009f06_r AV619534 599 1075
18 CM087h08_r AV392451 685 1238
19 CM089d11_r AV392278 692 1245
20 MXL075e08_r BP097426 700 1080
21 CM071e01_r AV391354 704 1030
22 CM057f01_r AV390467 713 1309
23 CM056a09_r AV390320 791 1403
24 HCL047d09_r AV642207 871 1077
25 MXL051a07_r BP096012 879 1373
26 MX201d01_r BP089131 923 1299
27 MXL092b07_r BP098357 1034 1455
28 MXL094b02_r BP098487 1183 1663
29 CL42b09_r AV395485 1332 1786
30 CM068c07_r AV391049 1384 1951




Chlamydomonas reinhardtii
Kazusa DNA Research Institute