KCC000493A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC000493A_C01 KCC000493A_c01
CTTATACATACGCGACTATTCTGCCGCTATACATAACCACTCAACTCGCTTAAGAGTCAG
TAAACATGGGCAAGGAGGCCCCCGCTATCGGTATTGACCTGGGCACCACGTACAGCTGCG
TGGGTGTCTGGCAGAATGACCGCGTGGAGATTATTGCCAACGATCAGGGCAACCGCACCA
CTCCCTCGTACGTGGCCTTCACGGACACTGAGCGTCTGATTGGTGATGCCGCCAAGAACC
AGGTCGCTATGAACCCGCGCCACACGGTGTTCGACGCCAAGCGCCTGATTGGCCGCAAGT
TCTCGGACCCCATTGTCCAGGCGGACATTAAGCTGTGGCCTTTCCAGGTTCGCGCCGGCG
CGCACGATGTGCCCGAGATCGTTGTCTCCTACAAGAACGAGGAGAAGGTCTTCAAGGCTG
AGGAGATCTCCTCGATGGTGCTTATCAAGATGAAGGAGACCGCTCAGGCTTTCCTGGGCG
CTGACCGCGAGGTCAAGAAGGCCGTGGTGACCGTGCCCGC


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC000493A_C01 KCC000493A_c01
         (520 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

sp|P25840|HS70_CHLRE Heat shock 70 kDa protein gi|22212947|gb|AA...   298  2e-80
pir||JQ1515 dnaK-type molecular chaperone HSP70 - Chlamydomonas ...   280  8e-75
gb|AAL79999.3| heat shock protein 70a [Dunaliella salina]             265  3e-70
gb|AAL68968.1| heat shock protein 70 [Chlorella zofingiensis]         238  3e-62
pir||JC4786 dnaK-type molecular chaperone hsc70-3 - tomato gi|76...   237  6e-62

>sp|P25840|HS70_CHLRE Heat shock 70 kDa protein gi|22212947|gb|AAB00730.2| 70 kDa heat
           shock protein [Chlamydomonas reinhardtii]
          Length = 650

 Score =  298 bits (764), Expect = 2e-80
 Identities = 150/151 (99%), Positives = 150/151 (99%)
 Frame = +3

Query: 66  MGKEAPAIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQV 245
           MGKEAPAIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQV
Sbjct: 1   MGKEAPAIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQV 60

Query: 246 AMNPRHTVFDAKRLIGRKFSDPIVQADIKLWPFQVRAGAHDVPEIVVSYKNEEKVFKAEE 425
           AMNPRHTVFDAKRLIGRKFSDPIVQADIKLWPFQVRAGAHDVPEIVVSYKNEEKVFKAEE
Sbjct: 61  AMNPRHTVFDAKRLIGRKFSDPIVQADIKLWPFQVRAGAHDVPEIVVSYKNEEKVFKAEE 120

Query: 426 ISSMVLIKMKETAQAFLGADREVKKAVVTVP 518
           ISSMVLIKMKETAQA LGADREVKKAVVTVP
Sbjct: 121 ISSMVLIKMKETAQASLGADREVKKAVVTVP 151

>pir||JQ1515 dnaK-type molecular chaperone HSP70 - Chlamydomonas reinhardtii
          Length = 649

 Score =  280 bits (716), Expect = 8e-75
 Identities = 143/151 (94%), Positives = 146/151 (95%)
 Frame = +3

Query: 66  MGKEAPAIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQV 245
           MGKEAPAIGIDLGTTYSCVG+WQNDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQV
Sbjct: 1   MGKEAPAIGIDLGTTYSCVGLWQNDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQV 60

Query: 246 AMNPRHTVFDAKRLIGRKFSDPIVQADIKLWPFQVRAGAHDVPEIVVSYKNEEKVFKAEE 425
           AMNPRHTVFDAKRLIGRKFSDPIVQ+DIKLWP QV A AHDVPEIVVSY+ EEKVFKAEE
Sbjct: 61  AMNPRHTVFDAKRLIGRKFSDPIVQSDIKLWPSQV-APAHDVPEIVVSYRTEEKVFKAEE 119

Query: 426 ISSMVLIKMKETAQAFLGADREVKKAVVTVP 518
           ISSMVLIKMKETAQA LGADREVKKAVVTVP
Sbjct: 120 ISSMVLIKMKETAQASLGADREVKKAVVTVP 150

>gb|AAL79999.3| heat shock protein 70a [Dunaliella salina]
          Length = 650

 Score =  265 bits (677), Expect = 3e-70
 Identities = 133/151 (88%), Positives = 141/151 (93%)
 Frame = +3

Query: 66  MGKEAPAIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQV 245
           M +EAPAIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTD ERLIGDAAKNQV
Sbjct: 1   MPREAPAIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDAERLIGDAAKNQV 60

Query: 246 AMNPRHTVFDAKRLIGRKFSDPIVQADIKLWPFQVRAGAHDVPEIVVSYKNEEKVFKAEE 425
           AMNP +TVFDAKRLIGRKF+D  VQ D KLWPFQVR+G  D+PEIVVSYK E+KVFKAEE
Sbjct: 61  AMNPFNTVFDAKRLIGRKFADQNVQNDAKLWPFQVRSGPGDIPEIVVSYKGEKKVFKAEE 120

Query: 426 ISSMVLIKMKETAQAFLGADREVKKAVVTVP 518
           ISSMVLIKMKETAQA+LG+DREVKKAVVTVP
Sbjct: 121 ISSMVLIKMKETAQAYLGSDREVKKAVVTVP 151

>gb|AAL68968.1| heat shock protein 70 [Chlorella zofingiensis]
          Length = 636

 Score =  238 bits (608), Expect = 3e-62
 Identities = 118/147 (80%), Positives = 131/147 (88%)
 Frame = +3

Query: 78  APAIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP 257
           +PAIGIDLGTTYSCVG+WQ+DRVEIIAN+QGNRTTPSYVAFTDTERLIGDAAKNQVAMNP
Sbjct: 3   SPAIGIDLGTTYSCVGLWQHDRVEIIANEQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP 62

Query: 258 RHTVFDAKRLIGRKFSDPIVQADIKLWPFQVRAGAHDVPEIVVSYKNEEKVFKAEEISSM 437
            +TVFDAKRLIGRKFSDP +Q DI  WPF+V AG  D P I V+YK E+K F  EEISSM
Sbjct: 63  INTVFDAKRLIGRKFSDPTIQHDISHWPFKVVAGPGDKPMIQVNYKGEDKTFAPEEISSM 122

Query: 438 VLIKMKETAQAFLGADREVKKAVVTVP 518
           VL+KMKE AQA++GAD+EVKKAVVTVP
Sbjct: 123 VLVKMKEIAQAYVGADKEVKKAVVTVP 149

>pir||JC4786 dnaK-type molecular chaperone hsc70-3 - tomato
           gi|762844|gb|AAB42159.1| Hsc70
          Length = 651

 Score =  237 bits (605), Expect = 6e-62
 Identities = 121/148 (81%), Positives = 130/148 (87%)
 Frame = +3

Query: 75  EAPAIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMN 254
           E PAIGIDLGTTYSCVGVWQ+DRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMN
Sbjct: 6   EGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMN 65

Query: 255 PRHTVFDAKRLIGRKFSDPIVQADIKLWPFQVRAGAHDVPEIVVSYKNEEKVFKAEEISS 434
           P +TVFDAKRLIGR+FSDP VQ+D+KLWPF+V  G  D P IVV+YK EEK F AEEISS
Sbjct: 66  PTNTVFDAKRLIGRRFSDPSVQSDMKLWPFKVIPGPADKPMIVVNYKGEEKQFSAEEISS 125

Query: 435 MVLIKMKETAQAFLGADREVKKAVVTVP 518
           MVLIKMKE A+AFLG    +K AVVTVP
Sbjct: 126 MVLIKMKEIAEAFLGT--TIKNAVVTVP 151



EST assemble image


clone accession position
1 HCL054e09_r AV642602 1 520
2 MX233d03_r BP091071 1 395
3 CL34b12_r AV394938 2 520
4 MXL008e10_r BP093449 7 377




Chlamydomonas reinhardtii
Kazusa DNA Research Institute