Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC000463A_C01 KCC000463A_c01
(802 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|ZP_00091928.1| COG0489: ATPases involved in chromosome parti... 40 0.044
gb|EAA38771.1| GLP_47_31579_30914 [Giardia lamblia ATCC 50803] 40 0.044
ref|NP_822342.1| hypothetical protein [Streptomyces avermitilis ... 40 0.057
ref|NP_217355.1| infB [Mycobacterium tuberculosis H37Rv] gi|1584... 40 0.057
ref|NP_062081.1| multiple endocrine neoplasia 1 [Rattus norvegic... 40 0.057
>ref|ZP_00091928.1| COG0489: ATPases involved in chromosome partitioning [Azotobacter
vinelandii]
Length = 629
Score = 40.0 bits (92), Expect = 0.044
Identities = 33/80 (41%), Positives = 38/80 (47%), Gaps = 13/80 (16%)
Frame = -3
Query: 218 RHAYPAMRATQQASQS------VVEGIS------QPRDAAAIRPHRLGGG-ALTGPSPAR 78
RHA RA Q SQ+ + G+S P A R HRL G AL P+P R
Sbjct: 105 RHARQEWRARPQGSQACRRDMGALRGLSFGPCFGGPLHAGDERLHRLEGRPALFPPAPFR 164
Query: 77 PGPRPGGRPAEGAGRRRGTR 18
PGPRP R GRRR +R
Sbjct: 165 PGPRP--RTGPSCGRRRRSR 182
>gb|EAA38771.1| GLP_47_31579_30914 [Giardia lamblia ATCC 50803]
Length = 221
Score = 40.0 bits (92), Expect = 0.044
Identities = 30/111 (27%), Positives = 50/111 (45%), Gaps = 5/111 (4%)
Frame = -1
Query: 451 SHDTVRRVGLHSPAAHRLTQTSA-----MPHASQATPVHPATSHARGVPRAVTLQEPPLT 287
SH + R V SP A R T S + + ++ HP S R + ++T PP T
Sbjct: 91 SHGSARSV---SPLALRATSQSTYRLVPVDNTARLLRQHPPGSSFRPLTTSLTSMAPPST 147
Query: 286 KHTSESVVYCIITAHTSSTYNFVDTHTRPCVLRNKQASPLLKGSRNRETRL 134
T+E + + + TA S+ FV+ P + + P+ +G E+R+
Sbjct: 148 SSTTERLPHAVDTADASA--RFVEREPDPDIKSGQPTEPMAEGPEASESRM 196
>ref|NP_822342.1| hypothetical protein [Streptomyces avermitilis MA-4680]
gi|29604808|dbj|BAC68877.1| hypothetical protein
[Streptomyces avermitilis MA-4680]
Length = 305
Score = 39.7 bits (91), Expect = 0.057
Identities = 29/82 (35%), Positives = 39/82 (47%)
Frame = -3
Query: 251 HRTHILNIQLCRHAYPAMRATQQASQSVVEGISQPRDAAAIRPHRLGGGALTGPSPARPG 72
H ++ +L H +P +RA A + VE ++ D AA R R GP+ RPG
Sbjct: 177 HHYFLVAAELAAHCHPGLRAAGDAIRLAVERVA---DEAARRGRR-------GPAADRPG 226
Query: 71 PRPGGRPAEGAGRRRGTRRRPP 6
RP GRP R G +RPP
Sbjct: 227 DRP-GRPG-----RAGRPQRPP 242
>ref|NP_217355.1| infB [Mycobacterium tuberculosis H37Rv]
gi|15842380|ref|NP_337417.1| translation initiation
factor IF-2 [Mycobacterium tuberculosis CDC1551]
gi|31794016|ref|NP_856509.1| PROBABLE TRANSLATION
INITIATION FACTOR IF-2 INFB [Mycobacterium bovis subsp.
bovis AF2122/97] gi|7531140|sp|P71613|IF2_MYCTU
Translation initiation factor IF-2
gi|7478152|pir||B70694 probable infB - Mycobacterium
tuberculosis (strain H37RV) gi|1648881|emb|CAB03670.1|
infB [Mycobacterium tuberculosis H37Rv]
gi|13882679|gb|AAK47231.1| translation initiation factor
IF-2 [Mycobacterium tuberculosis CDC1551]
gi|31619610|emb|CAD95049.1| PROBABLE TRANSLATION
INITIATION FACTOR IF-2 INFB [Mycobacterium bovis subsp.
bovis AF2122/97]
Length = 900
Score = 39.7 bits (91), Expect = 0.057
Identities = 24/45 (53%), Positives = 28/45 (61%), Gaps = 2/45 (4%)
Frame = -3
Query: 161 GISQPRDAAAIRPHRLGGGALTGPSPARPG-PRPGGRP-AEGAGR 33
G+ +P + P R GGA+ G P RPG PRPGGRP A GAGR
Sbjct: 181 GVPRPGASPGSMPPR-PGGAVGGARPPRPGAPRPGGRPGAPGAGR 224
>ref|NP_062081.1| multiple endocrine neoplasia 1 [Rattus norvegicus]
gi|5360729|dbj|BAA82134.1| menin [Rattus norvegicus]
gi|6014461|gb|AAF01353.1|AF130369_1 MEN1 tumor
suppressor [Rattus norvegicus]
gi|6014463|gb|AAF01354.1|AF130370_1 MEN1 tumor
suppressor [Rattus norvegicus]
Length = 610
Score = 39.7 bits (91), Expect = 0.057
Identities = 24/60 (40%), Positives = 31/60 (51%), Gaps = 5/60 (8%)
Frame = +1
Query: 1 ARGGRRRVPRRRPAPSAGRPP-----GRGPGRAGLGPVSAPPPRR*GRMAAASRGCEIPS 165
AR GRRR PRR P PP +GPG +G S PP + G ++ +RG E+ S
Sbjct: 475 AREGRRRGPRRESKPEEPPPPKKPALDKGPG-SGQSAGSGPPRKTSGTVSGTARGTEVSS 533
