Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC000411A_C01 KCC000411A_c01
(507 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pdb|1FLO|A Chain A, Flp Recombinase-Holliday Junction Complex I ... 329 1e-89
pir||PDBYA site-specific recombinase FLP - yeast (Saccharomyces ... 329 1e-89
gb|AAC53669.1| Flp recombinase 329 1e-89
ref|NP_040488.1| FLP recombinase [Saccharomyces cerevisiae] gi|1... 329 1e-89
pdb|1M6X|A Chain A, Flpe-Holliday Junction Complex gi|28373602|p... 327 5e-89
>pdb|1FLO|A Chain A, Flp Recombinase-Holliday Junction Complex I
gi|10120586|pdb|1FLO|B Chain B, Flp Recombinase-Holliday
Junction Complex I gi|10120587|pdb|1FLO|C Chain C, Flp
Recombinase-Holliday Junction Complex I
gi|10120588|pdb|1FLO|D Chain D, Flp Recombinase-Holliday
Junction Complex I
Length = 422
Score = 329 bits (843), Expect = 1e-89
Identities = 162/162 (100%), Positives = 162/162 (100%)
Frame = +1
Query: 13 TGNSSSNKQEYQLLKDNLVRSYNKALKKNAPYSIFAIKNGPKSHIGRHLMTSFLSMKGLT 192
TGNSSSNKQEYQLLKDNLVRSYNKALKKNAPYSIFAIKNGPKSHIGRHLMTSFLSMKGLT
Sbjct: 261 TGNSSSNKQEYQLLKDNLVRSYNKALKKNAPYSIFAIKNGPKSHIGRHLMTSFLSMKGLT 320
Query: 193 ELTNVVGNWSDKRASAVARTTYTHQITAIPDHYFALVSRYYAYDPISKEMIALKDETNPI 372
ELTNVVGNWSDKRASAVARTTYTHQITAIPDHYFALVSRYYAYDPISKEMIALKDETNPI
Sbjct: 321 ELTNVVGNWSDKRASAVARTTYTHQITAIPDHYFALVSRYYAYDPISKEMIALKDETNPI 380
Query: 373 EEWQHIEQLKGSAEGSIRYPAWNGIISQEVLDYLSSYINRRI 498
EEWQHIEQLKGSAEGSIRYPAWNGIISQEVLDYLSSYINRRI
Sbjct: 381 EEWQHIEQLKGSAEGSIRYPAWNGIISQEVLDYLSSYINRRI 422
>pir||PDBYA site-specific recombinase FLP - yeast (Saccharomyces cerevisiae)
plasmid 2-mu
Length = 423
Score = 329 bits (843), Expect = 1e-89
Identities = 162/162 (100%), Positives = 162/162 (100%)
Frame = +1
Query: 13 TGNSSSNKQEYQLLKDNLVRSYNKALKKNAPYSIFAIKNGPKSHIGRHLMTSFLSMKGLT 192
TGNSSSNKQEYQLLKDNLVRSYNKALKKNAPYSIFAIKNGPKSHIGRHLMTSFLSMKGLT
Sbjct: 262 TGNSSSNKQEYQLLKDNLVRSYNKALKKNAPYSIFAIKNGPKSHIGRHLMTSFLSMKGLT 321
Query: 193 ELTNVVGNWSDKRASAVARTTYTHQITAIPDHYFALVSRYYAYDPISKEMIALKDETNPI 372
ELTNVVGNWSDKRASAVARTTYTHQITAIPDHYFALVSRYYAYDPISKEMIALKDETNPI
Sbjct: 322 ELTNVVGNWSDKRASAVARTTYTHQITAIPDHYFALVSRYYAYDPISKEMIALKDETNPI 381
Query: 373 EEWQHIEQLKGSAEGSIRYPAWNGIISQEVLDYLSSYINRRI 498
EEWQHIEQLKGSAEGSIRYPAWNGIISQEVLDYLSSYINRRI
Sbjct: 382 EEWQHIEQLKGSAEGSIRYPAWNGIISQEVLDYLSSYINRRI 423
>gb|AAC53669.1| Flp recombinase
Length = 423
Score = 329 bits (843), Expect = 1e-89
Identities = 162/162 (100%), Positives = 162/162 (100%)
Frame = +1
Query: 13 TGNSSSNKQEYQLLKDNLVRSYNKALKKNAPYSIFAIKNGPKSHIGRHLMTSFLSMKGLT 192
TGNSSSNKQEYQLLKDNLVRSYNKALKKNAPYSIFAIKNGPKSHIGRHLMTSFLSMKGLT
Sbjct: 262 TGNSSSNKQEYQLLKDNLVRSYNKALKKNAPYSIFAIKNGPKSHIGRHLMTSFLSMKGLT 321
Query: 193 ELTNVVGNWSDKRASAVARTTYTHQITAIPDHYFALVSRYYAYDPISKEMIALKDETNPI 372
ELTNVVGNWSDKRASAVARTTYTHQITAIPDHYFALVSRYYAYDPISKEMIALKDETNPI
Sbjct: 322 ELTNVVGNWSDKRASAVARTTYTHQITAIPDHYFALVSRYYAYDPISKEMIALKDETNPI 381
Query: 373 EEWQHIEQLKGSAEGSIRYPAWNGIISQEVLDYLSSYINRRI 498
EEWQHIEQLKGSAEGSIRYPAWNGIISQEVLDYLSSYINRRI
Sbjct: 382 EEWQHIEQLKGSAEGSIRYPAWNGIISQEVLDYLSSYINRRI 423
>ref|NP_040488.1| FLP recombinase [Saccharomyces cerevisiae]
gi|120357|sp|P03870|FLP_YEAST Recombinase FLP protein
(Protein Able) gi|172191|gb|AAB59340.1| recombinase
(FLP) [Saccharomyces cerevisiae]
gi|2961155|gb|AAC27032.1| Flp recombinase [site-specific
excision vector pFLP2]
Length = 423
Score = 329 bits (843), Expect = 1e-89
Identities = 162/162 (100%), Positives = 162/162 (100%)
Frame = +1
Query: 13 TGNSSSNKQEYQLLKDNLVRSYNKALKKNAPYSIFAIKNGPKSHIGRHLMTSFLSMKGLT 192
TGNSSSNKQEYQLLKDNLVRSYNKALKKNAPYSIFAIKNGPKSHIGRHLMTSFLSMKGLT
Sbjct: 262 TGNSSSNKQEYQLLKDNLVRSYNKALKKNAPYSIFAIKNGPKSHIGRHLMTSFLSMKGLT 321
Query: 193 ELTNVVGNWSDKRASAVARTTYTHQITAIPDHYFALVSRYYAYDPISKEMIALKDETNPI 372
ELTNVVGNWSDKRASAVARTTYTHQITAIPDHYFALVSRYYAYDPISKEMIALKDETNPI
Sbjct: 322 ELTNVVGNWSDKRASAVARTTYTHQITAIPDHYFALVSRYYAYDPISKEMIALKDETNPI 381
Query: 373 EEWQHIEQLKGSAEGSIRYPAWNGIISQEVLDYLSSYINRRI 498
EEWQHIEQLKGSAEGSIRYPAWNGIISQEVLDYLSSYINRRI
Sbjct: 382 EEWQHIEQLKGSAEGSIRYPAWNGIISQEVLDYLSSYINRRI 423
>pdb|1M6X|A Chain A, Flpe-Holliday Junction Complex gi|28373602|pdb|1M6X|B
Chain B, Flpe-Holliday Junction Complex
Length = 423
Score = 327 bits (838), Expect = 5e-89
Identities = 161/162 (99%), Positives = 161/162 (99%)
Frame = +1
Query: 13 TGNSSSNKQEYQLLKDNLVRSYNKALKKNAPYSIFAIKNGPKSHIGRHLMTSFLSMKGLT 192
TGNSSSNKQEYQLLKDNLVRSYNKALKKNAPY IFAIKNGPKSHIGRHLMTSFLSMKGLT
Sbjct: 262 TGNSSSNKQEYQLLKDNLVRSYNKALKKNAPYPIFAIKNGPKSHIGRHLMTSFLSMKGLT 321
Query: 193 ELTNVVGNWSDKRASAVARTTYTHQITAIPDHYFALVSRYYAYDPISKEMIALKDETNPI 372
ELTNVVGNWSDKRASAVARTTYTHQITAIPDHYFALVSRYYAYDPISKEMIALKDETNPI
Sbjct: 322 ELTNVVGNWSDKRASAVARTTYTHQITAIPDHYFALVSRYYAYDPISKEMIALKDETNPI 381
Query: 373 EEWQHIEQLKGSAEGSIRYPAWNGIISQEVLDYLSSYINRRI 498
EEWQHIEQLKGSAEGSIRYPAWNGIISQEVLDYLSSYINRRI
Sbjct: 382 EEWQHIEQLKGSAEGSIRYPAWNGIISQEVLDYLSSYINRRI 423
