Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC000396A_C01 KCC000396A_c01
(575 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_345375.1| similar to homeo box D9; homeobox protein Hox-D... 45 7e-04
ref|XP_283297.1| hypothetical protein XP_283297 [Mus musculus] 42 0.008
ref|NP_038583.1| homeo box D9 [Mus musculus] gi|123287|sp|P28357... 42 0.008
emb|CAC07962.1| putative mitogen-activated protein kinase 8 [Lei... 39 0.039
ref|ZP_00009817.1| COG2885: Outer membrane protein and related p... 39 0.039
>ref|XP_345375.1| similar to homeo box D9; homeobox protein Hox-D9; Hox-4.3, mouse,
homolog of [Rattus norvegicus]
Length = 198
Score = 45.1 bits (105), Expect = 7e-04
Identities = 25/54 (46%), Positives = 29/54 (53%)
Frame = -2
Query: 496 AAAWREPGGGTLGRPQLLASEPAAACRAMGCCAADMNFVFSAAWSAAHGDAGAA 335
AA + PG GT GRP +A PAAA C A + VFSA+WSA AA
Sbjct: 25 AARFGPPGPGTQGRPAGVADGPAAAAEFASCSFAPKSSVFSASWSAVAAQPPAA 78
>ref|XP_283297.1| hypothetical protein XP_283297 [Mus musculus]
Length = 94
Score = 41.6 bits (96), Expect = 0.008
Identities = 21/56 (37%), Positives = 26/56 (45%)
Frame = +3
Query: 9 PPFFFFFFFFFFFNKLAIYKDSRRVTTMRDGFFSRACEGQHTRCAPARHTTKAPTC 176
PPFFFFFFFFFF N++++ C G H+ C P T TC
Sbjct: 38 PPFFFFFFFFFFGNRVSL--------------CIPGCPGIHSVCRPGSPGTNRSTC 79
>ref|NP_038583.1| homeo box D9 [Mus musculus] gi|123287|sp|P28357|HXD9_MOUSE Homeobox
protein Hox-D9 (Hox-4.4) (Hox-5.2) gi|90635|pir||S20880
homeotic protein Hox 4.5 - mouse
gi|51416|emb|CAA44542.1| Hox-4.4 [Mus musculus]
gi|17512370|gb|AAH19150.1| Homeo box D9 [Mus musculus]
Length = 339
Score = 41.6 bits (96), Expect = 0.008
Identities = 25/55 (45%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = -2
Query: 496 AAAWREPGGGTLGRPQLLASEPAAACRAMGCCA-ADMNFVFSAAWSAAHGDAGAA 335
AA + PG GT GRP +A PAAA C+ A + VFSA+WSA AA
Sbjct: 25 AARFGPPGPGTQGRPAGVADGPAAATAEFASCSFAPKSSVFSASWSAVAAQPPAA 79
>emb|CAC07962.1| putative mitogen-activated protein kinase 8 [Leishmania mexicana]
Length = 1579
Score = 39.3 bits (90), Expect = 0.039
Identities = 30/93 (32%), Positives = 42/93 (44%)
Frame = +3
Query: 294 RSQRGAPIRAPALHAAPASPCAADHAAENTKFMSAAQHPIARHAAAGSDASSCGRPSVPP 473
RS G I L A PA+P + + F + AQ P A +A +++ RP +P
Sbjct: 882 RSSVGRRIDGDGLQAVPAAPSCVNATTPASSFRATAQEP-AEVSALRRRSTAKSRP-LPQ 939
Query: 474 PGSRHAAAKGTAGTRTATLH*CPDTVRLPEPLL 572
PG R + A A LH + LP+PLL
Sbjct: 940 PGRRTSTATARARIANGNLH----SPALPKPLL 968
>ref|ZP_00009817.1| COG2885: Outer membrane protein and related
peptidoglycan-associated (lipo)proteins
[Rhodopseudomonas palustris]
Length = 689
Score = 39.3 bits (90), Expect = 0.039
Identities = 40/146 (27%), Positives = 49/146 (33%), Gaps = 10/146 (6%)
Frame = +1
Query: 115 PVKANTHAAHPHGTLRKPRHAVRLPNEKPHAEHFGPLPGAC----PP*F*HRLSKPCTPH 282
P A H A P PR A P P A P P PP H P PH
Sbjct: 78 PAAAPPHVAPPPPPPAPPRAA---PPPPPPAAAPAPAPKRAEPPPPPPPSHSAPPPPPPH 134
Query: 283 TYSGAASAARPFAPQRFMPRQRRHVQRTMLLKIQNSCRP------RSTP*PDMLPPAPTQ 444
A +P AP P +R ++ P R P P +PP
Sbjct: 135 AAPPPPPAPKPSAPPTAAPAERPAAPPPAAAPVRPPAPPAGEAPQRRGPPPGAVPPNAVP 194
Query: 445 AAAAAPVYRRRAHATRQPREQQAPGP 522
AAAP + A + P E++ P P
Sbjct: 195 PNAAAPDAAKPDAAKQPPGERRGPPP 220
