KCC000352A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC000352A_C01 KCC000352A_c01
TCCACACAAGCACACTGAATACTCGCTGCTCCCTTCGCCCACTACTAATACTAGTCCTTC
CTCTCGCGCCGCGAGTCCTTTCCTTCGTCGCCGCTCAAGAATGCCTCTGGCCCTTCAAGC
TGCCCCTGGGATGCCTACATCCTGGATGGCTGCCCATCACCTACGGCCAGCGCTGGCCTT
CGTCGGCGATGGTGCGTGCCCGGTGGGTGGCCCCACCGGCTGACCCCGGAGACCTCCAGC
ATCGCCTACTACGAAGACGAGCAGAAGAGCGCCGCCGCGGCCCAGCGCTACGACAACTCG
TTTAAGCAGTTCTTCGATGCCCGCATCCGCAACCACAAGGTCGGCGTGTTCCAGAACTGG
ATGCCCAACAGCCCTCAGTAAAGCGATGCCATTAGGATTGGTCGCAGCGCAGCATGTGAT
GAGCTGCAGAGGCTTAGCCCTGATGCGCAGGCAGTGGCATTGAGCGCGTGATTGGGCGCG
GAAGACTGTTGACTCCTATAAAGTGTAGAATTCATCTTGCCCAATTTTTTGCGGGGACTT
TGCGAGAGGGCATGGGCGCCCCTTGGCGTGAGTTGCAGTGCGCACGACGCCGCGCGACCC
CGCGTAGCAGGAGTGACCCCCTTGGTTGCGGGGGTCTGAAGCTTGACGCTGACTTGAATG
ACGGCTGACCCACATGGCATGACTCTTGTGACTTCGATGTCACCACACGCACACACACAC
GGTTGACCAAGACGACGATTTACTTGACAAACGCTTGTGACTGCTGCTTGACTGGTAGCT
TTGTATATGAAGACATCAATCTGGCGATTTATGAAATGCTGCTAGCACGGCGGTGACATC
GTGGGCTGTCGTAAGATTGAAGAGAGCCGTACGTGATGCCCTTCGTCTATGGCAGAGGCT
TTGAGTAGGCTAGGAACGTGACTCTTGGTTCGCAACTACATAGGAGAGTCGGTTTGTGGA
GCTTCAATATGTGACCCAAATGAATAACCCGAGATTGTGTGCGCAACTCGCCACACCGGG
AATTGACAGTGAGCAACGGCGCGCCCCTGCGGACGCCTGACAGTTGTAACTGATCACGAC
Gc


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC000352A_C01 KCC000352A_c01
         (1082 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|XP_048104.2| similar to profilaggrin - human (fragments) [Ho...    44  0.005
emb|CAB46679.1| proteophosphoglycan [Leishmania major]                 43  0.011
pir||H84824 En/Spm-like transposon protein [imported] - Arabidop...    42  0.019
gb|AAK31375.1|AC084329_1 ppg3 [Leishmania major]                       42  0.019
ref|NP_181536.2| En/Spm-related transposon protein [Arabidopsis ...    42  0.019

>ref|XP_048104.2| similar to profilaggrin - human (fragments) [Homo sapiens]
          Length = 5689

 Score = 43.9 bits (102), Expect = 0.005
 Identities = 35/120 (29%), Positives = 54/120 (44%), Gaps = 9/120 (7%)
 Frame = -2

Query: 361  SSSGTRRPCGCGCGHRRTA*TSCRSAGPRRRSSARLRSRRCWRSPGSAGGATHR------ 200
            SS G R     G  H+++A +S  S  PR ++S+ +R  R W S GS    +        
Sbjct: 4924 SSPGERH----GSRHQQSADSSRHSGIPRGQASSAVRDSRHWGSSGSQASDSEGHSEESD 4979

Query: 199  ARTIADEGQRWP*VMGSHPGCRHPRGSLKGQRHS*---AATKERTRGARGRTSISSGRRE 29
             ++++  GQ  P         R   G   G+  S     +T E++  A GRT  S+GRR+
Sbjct: 4980 TQSVSGHGQAGPHQQSHQESARDRSGGRSGRSGSFLYQVSTHEQSESAHGRTRTSTGRRQ 5039

 Score = 42.7 bits (99), Expect = 0.011
 Identities = 35/120 (29%), Positives = 54/120 (44%), Gaps = 9/120 (7%)
 Frame = -2

Query: 361  SSSGTRRPCGCGCGHRRTA*TSCRSAGPRRRSSARLRSRRCWRSPGSAGGATH------R 200
            SS G R     G  H+++A +S  S  PRR++S+ +R    W S GS    +        
Sbjct: 2655 SSPGERH----GSRHQQSADSSRHSGIPRRQASSAVRDSGHWGSSGSQASDSEGHSEESD 2710

Query: 199  ARTIADEGQRWP*VMGSHPGCRHPRGSLKGQRHS---*AATKERTRGARGRTSISSGRRE 29
             ++++  GQ  P         R   G   G+  S     +T E++  A GRT  S+GRR+
Sbjct: 2711 TQSVSGHGQDGPHQQSHQESARDWSGGRSGRSGSFIYQVSTHEQSESAHGRTRTSTGRRQ 2770

>emb|CAB46679.1| proteophosphoglycan [Leishmania major]
          Length = 873

 Score = 42.7 bits (99), Expect = 0.011
 Identities = 30/123 (24%), Positives = 59/123 (47%)
 Frame = +2

Query: 23   SLLPSPTTNTSPSSRAASPFLRRRSRMPLALQAAPGMPTSWMAAHHLRPALAFVGDGACP 202
            S  PS +++++PSS +++P     S  P +  +AP   +S  A      +       + P
Sbjct: 745  SSAPSASSSSAPSSSSSAPSASSSSA-PSSSSSAPSASSS-SAPSSSSSSAPSASSSSAP 802

Query: 203  VGGPTG*PRRPPASPTTKTSRRAPPRPSATTTRLSSSSMPASATTRSACSRTGCPTALSK 382
                +  P    +S  + +S  AP   S++    SSSS P+++++ ++ S +  P+A S 
Sbjct: 803  SSSSSSAPSASSSSAPSSSSSSAPSASSSSAPSSSSSSAPSASSSSASSSSSSAPSASSS 862

Query: 383  AMP 391
            + P
Sbjct: 863  SAP 865

 Score = 41.2 bits (95), Expect = 0.032
 Identities = 30/121 (24%), Positives = 58/121 (47%)
 Frame = +2

Query: 23   SLLPSPTTNTSPSSRAASPFLRRRSRMPLALQAAPGMPTSWMAAHHLRPALAFVGDGACP 202
            S  PS +++++PS+ ++S      S  P A  ++   P+S  +A     + A     + P
Sbjct: 659  SSAPSSSSSSAPSASSSSAPSSSSSSAPSA--SSSSAPSSSSSAPSASSSSAPSSSSSAP 716

Query: 203  VGGPTG*PRRPPASPTTKTSRRAPPRPSATTTRLSSSSMPASATTRSACSRTGCPTALSK 382
                +  P    +S  + +S  AP   S++    SSSS P+S+++  + S +  P++ S 
Sbjct: 717  SASSSSAPSSSSSSAPSASSSSAPSSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSS 776

Query: 383  A 385
            A
Sbjct: 777  A 777

 Score = 38.9 bits (89), Expect = 0.16
 Identities = 32/136 (23%), Positives = 62/136 (45%), Gaps = 13/136 (9%)
 Frame = +2

Query: 23   SLLPSPTTNTSPSSRAASPFLRRRSRMPLALQAAPGMPTSWM----------AAHHLRPA 172
            S  PS +++++PSS +++P     S    +  +AP   +S            A+    P+
Sbjct: 636  SSAPSASSSSAPSSSSSAPSASSSSAPSSSSSSAPSASSSSAPSSSSSSAPSASSSSAPS 695

Query: 173  LAFVGDGACPVGGPTG*PRRPPASPTTKTSRRAPPRPSATTTRL---SSSSMPASATTRS 343
             +     A     P+     P AS ++  S  +   PSA+++     SSSS P+++++ +
Sbjct: 696  SSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSSAPSASSSSAPSSSSSSAPSASSSSA 755

Query: 344  ACSRTGCPTALSKAMP 391
              S +  P+A S + P
Sbjct: 756  PSSSSSAPSASSSSAP 771

 Score = 38.5 bits (88), Expect = 0.20
 Identities = 30/124 (24%), Positives = 60/124 (48%), Gaps = 1/124 (0%)
 Frame = +2

Query: 23   SLLPSPTTNTSPSSRAASPFLRRRSRMPLALQAAPGMPTSWMAAHHLRPALAFVGDGACP 202
            S  PS +++++PS+ ++S      S  P A  ++   P+S  +A     + A     + P
Sbjct: 721  SSAPSSSSSSAPSASSSSAPSSSSSSAPSA--SSSSAPSSSSSAPSASSSSAPSSSSSAP 778

Query: 203  VGGPTG*PRRPPASPTTKTSRRAPPRPSATTTRLSSSSMPASATTRS-ACSRTGCPTALS 379
                +  P    +S  + +S  AP   S++    SSSS P+S+++ + + S +  P++ S
Sbjct: 779  SASSSSAPSSSSSSAPSASSSSAPSSSSSSAPSASSSSAPSSSSSSAPSASSSSAPSSSS 838

Query: 380  KAMP 391
             + P
Sbjct: 839  SSAP 842

>pir||H84824 En/Spm-like transposon protein [imported] - Arabidopsis thaliana
           gi|2088658|gb|AAB95292.1| En/Spm-like transposon protein
           [Arabidopsis thaliana]
          Length = 510

 Score = 42.0 bits (97), Expect = 0.019
 Identities = 34/121 (28%), Positives = 56/121 (46%), Gaps = 2/121 (1%)
 Frame = +2

Query: 38  PTTNTSPSSRAASPFLRRRSRMPLALQAAPGMPTSWMAAHHLRPALAFVGDGACPVGGPT 217
           P T TS  + +++    R         ++PG+ +S  A+   RP+ +         GGP 
Sbjct: 108 PATLTSRLANSSTESAARNHLTSRQQTSSPGLSSSSGASR--RPSSS---------GGPG 156

Query: 218 G*PRRPPASPTTKTSRRAPPRPSATTTR--LSSSSMPASATTRSACSRTGCPTALSKAMP 391
             P  P    +T T+     RPS  T+R  +SS++ P+   +RS  S T  PT +S++  
Sbjct: 157 SRPATPTGRSSTLTANSKSSRPSTPTSRATVSSATRPSLTNSRSTVSATTKPTPMSRSTS 216

Query: 392 L 394
           L
Sbjct: 217 L 217

 Score = 38.9 bits (89), Expect = 0.16
 Identities = 48/147 (32%), Positives = 64/147 (42%), Gaps = 11/147 (7%)
 Frame = +2

Query: 32  PSPTTNTSPS-SRAASPFLRRR----SRMP-LALQAAPGMPTSW----MAAHHLRPALAF 181
           P PT + +P+ SRAASP +R R    S MP  +L+  P + T+     ++A   RP    
Sbjct: 321 PMPTPSKNPALSRAASPTVRSRPWKPSDMPGFSLETPPNLRTTLPERPLSATRGRPGAPS 380

Query: 182 VGDGACPVGGPT-G*PRRPPASPTTKTSRRAPPRPSATTTRLSSSSMPASATTRSACSRT 358
              G+   GGP  G PRR   SP    SR   P  S      S SS+PA     S  S  
Sbjct: 381 SRSGSVEPGGPPGGRPRRQSCSP----SRGRAPMYS------SGSSVPAVNRGYSKASDN 430

Query: 359 GCPTALSKAMPLGLVAAQHVMSCRGLA 439
             P  +   M       + V++ R LA
Sbjct: 431 VSPVMMGTKM------VERVINMRKLA 451

>gb|AAK31375.1|AC084329_1 ppg3 [Leishmania major]
          Length = 1325

 Score = 42.0 bits (97), Expect = 0.019
 Identities = 30/123 (24%), Positives = 58/123 (46%)
 Frame = +2

Query: 23   SLLPSPTTNTSPSSRAASPFLRRRSRMPLALQAAPGMPTSWMAAHHLRPALAFVGDGACP 202
            S  PS +++++PSS +++P     S  P +  +AP   +S  A      +       + P
Sbjct: 850  SSAPSASSSSAPSSSSSAPSASSSSA-PSSSSSAPSASSS-SAPSSSSSSAPSASSSSAP 907

Query: 203  VGGPTG*PRRPPASPTTKTSRRAPPRPSATTTRLSSSSMPASATTRSACSRTGCPTALSK 382
                +  P    +S  + +S  AP   S++    SSSS P+++++ +  S +  P+A S 
Sbjct: 908  SSSSSSAPSASSSSAPSSSSSSAPSASSSSAPSSSSSSAPSASSSSAPSSSSSAPSASSS 967

Query: 383  AMP 391
            + P
Sbjct: 968  SAP 970

 Score = 42.0 bits (97), Expect = 0.019
 Identities = 32/128 (25%), Positives = 62/128 (48%), Gaps = 5/128 (3%)
 Frame = +2

Query: 23   SLLPSPTTNTSPSSRAASPFLRRRSRMPLALQAAPGM-----PTSWMAAHHLRPALAFVG 187
            S  PS +++++PSS +++P     S  P +  +AP       P+S  +A     + A   
Sbjct: 683  SSAPSASSSSAPSSSSSAPSASSSSA-PSSSSSAPSASSSSAPSSSSSAPSASSSSAPSS 741

Query: 188  DGACPVGGPTG*PRRPPASPTTKTSRRAPPRPSATTTRLSSSSMPASATTRSACSRTGCP 367
              + P    +  P    ++P+  +S  AP   S++    SSSS P+S+++  + S +  P
Sbjct: 742  SSSAPSASSSSAPSSSSSAPSASSSS-APSSSSSSAPSASSSSAPSSSSSAPSASSSSAP 800

Query: 368  TALSKAMP 391
            ++ S + P
Sbjct: 801  SSSSSSAP 808

 Score = 41.6 bits (96), Expect = 0.024
 Identities = 30/128 (23%), Positives = 61/128 (47%), Gaps = 5/128 (3%)
 Frame = +2

Query: 23   SLLPSPTTNTSPSSRAASPFLRRRSRMPLALQAAPGM-----PTSWMAAHHLRPALAFVG 187
            S  PS +++++PSS +++P     S    +  +AP       P+S  +A     + A   
Sbjct: 774  SSAPSASSSSAPSSSSSAPSASSSSAPSSSSSSAPSASSSSAPSSSSSAPSASSSSAPSS 833

Query: 188  DGACPVGGPTG*PRRPPASPTTKTSRRAPPRPSATTTRLSSSSMPASATTRSACSRTGCP 367
              + P    +  P    ++P+  +S  + P  S++    SSSS P+S+++  + S +  P
Sbjct: 834  SSSAPSASSSSAPSSSSSAPSASSS--SAPSSSSSAPSASSSSAPSSSSSAPSASSSSAP 891

Query: 368  TALSKAMP 391
            ++ S + P
Sbjct: 892  SSSSSSAP 899

 Score = 41.2 bits (95), Expect = 0.032
 Identities = 32/125 (25%), Positives = 59/125 (46%), Gaps = 2/125 (1%)
 Frame = +2

Query: 23   SLLPSPTTNTSPSSRAASPFLRRRSRMPLALQAAPGMPTSWMAAHHLRPALAFVGDGACP 202
            S  PS +++++PSS ++S      S  P +  +AP   +S        P+ +     A  
Sbjct: 974  SSAPSASSSSAPSSSSSSAPSASSSSAPSSSSSAPSASSS------SAPSSSSSAPSASS 1027

Query: 203  VGGPTG*PRRPPASPTT--KTSRRAPPRPSATTTRLSSSSMPASATTRSACSRTGCPTAL 376
               P+     P AS ++   +S  AP   S++    SSSS P+++++ +  S +  P+A 
Sbjct: 1028 SSAPSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSSAPSASSSSAPSSSSSAPSAS 1087

Query: 377  SKAMP 391
            S + P
Sbjct: 1088 SSSAP 1092

 Score = 39.7 bits (91), Expect = 0.092
 Identities = 32/129 (24%), Positives = 62/129 (47%), Gaps = 6/129 (4%)
 Frame = +2

Query: 23   SLLPSPTTNTSPSSRAASPFLRRRSRMPLALQAAPGM-----PTSWMAAHHLRPALAFVG 187
            S  PS +++++PSS +++P     S  P +  +AP       P+S  +A     + A   
Sbjct: 820  SSAPSASSSSAPSSSSSAPSASSSSA-PSSSSSAPSASSSSAPSSSSSAPSASSSSAPSS 878

Query: 188  DGACPVGGPTG*PRRPPASPTTKTSRRAPPRPSATTTRLSSSSMPASATTRS-ACSRTGC 364
              + P    +  P    +S  + +S  AP   S++    SSSS P+S+++ + + S +  
Sbjct: 879  SSSAPSASSSSAPSSSSSSAPSASSSSAPSSSSSSAPSASSSSAPSSSSSSAPSASSSSA 938

Query: 365  PTALSKAMP 391
            P++ S + P
Sbjct: 939  PSSSSSSAP 947

 Score = 39.7 bits (91), Expect = 0.092
 Identities = 28/121 (23%), Positives = 55/121 (45%)
 Frame = +2

Query: 23   SLLPSPTTNTSPSSRAASPFLRRRSRMPLALQAAPGMPTSWMAAHHLRPALAFVGDGACP 202
            S  PS +++++PSS +++P     S    +  +AP   +S   +             + P
Sbjct: 865  SSAPSASSSSAPSSSSSAPSASSSSAPSSSSSSAPSASSSSAPSS---------SSSSAP 915

Query: 203  VGGPTG*PRRPPASPTTKTSRRAPPRPSATTTRLSSSSMPASATTRSACSRTGCPTALSK 382
                +  P    +S  + +S  AP   S++    SSSS P+S+++  + S +  P++ S 
Sbjct: 916  SASSSSAPSSSSSSAPSASSSSAPSSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSS 975

Query: 383  A 385
            A
Sbjct: 976  A 976

 Score = 38.1 bits (87), Expect = 0.27
 Identities = 32/129 (24%), Positives = 63/129 (48%), Gaps = 6/129 (4%)
 Frame = +2

Query: 23   SLLPSPTTNTSPSSRAASPFLRRRSRMPLALQAAP-----GMPTSWMAAHHLRPALAFVG 187
            S  PS +++++PSS +++P     S  P +  +AP       P+S  +A     + A   
Sbjct: 805  SSAPSASSSSAPSSSSSAP-SASSSSAPSSSSSAPSASSSSAPSSSSSAPSASSSSAPSS 863

Query: 188  DGACPVGGPTG*PRRPPASPTTKTSRRAPPRPSATTTRLSSSSMPASATTRS-ACSRTGC 364
              + P    +  P    ++P+  +S  AP   S++    SSSS P+S+++ + + S +  
Sbjct: 864  SSSAPSASSSSAPSSSSSAPSASSS-SAPSSSSSSAPSASSSSAPSSSSSSAPSASSSSA 922

Query: 365  PTALSKAMP 391
            P++ S + P
Sbjct: 923  PSSSSSSAP 931

 Score = 38.1 bits (87), Expect = 0.27
 Identities = 30/123 (24%), Positives = 59/123 (47%)
 Frame = +2

Query: 23   SLLPSPTTNTSPSSRAASPFLRRRSRMPLALQAAPGMPTSWMAAHHLRPALAFVGDGACP 202
            S  PS +++++PSS +++P     S  P +  +AP   +S  +A     +       + P
Sbjct: 713  SSAPSASSSSAPSSSSSAPSASSSSA-PSSSSSAPSASSS--SAPSSSSSAPSASSSSAP 769

Query: 203  VGGPTG*PRRPPASPTTKTSRRAPPRPSATTTRLSSSSMPASATTRSACSRTGCPTALSK 382
                +  P    +S  + +S  AP   S++    SSSS P+++++ +  S +  P+A S 
Sbjct: 770  SSSSSSAPSASSSSAPSSSSS-APSASSSSAPSSSSSSAPSASSSSAPSSSSSAPSASSS 828

Query: 383  AMP 391
            + P
Sbjct: 829  SAP 831

 Score = 38.1 bits (87), Expect = 0.27
 Identities = 29/125 (23%), Positives = 59/125 (47%), Gaps = 2/125 (1%)
 Frame = +2

Query: 23   SLLPSPTTNTSPSSRAASPFLRRRSRMPLALQAAPGMPTSWMAAHHLRPALAFVGDGACP 202
            S  PS +++++PSS ++S      S  P +  +AP   +S        P+ +     A  
Sbjct: 928  SSAPSASSSSAPSSSSSSAPSASSSSAPSSSSSAPSASSS------SAPSSSSSAPSASS 981

Query: 203  VGGPTG*PRRPPASPTTKTSRRAPPRPSATTTRL--SSSSMPASATTRSACSRTGCPTAL 376
               P+      P++ ++     +   PSA+++    SSSS P+++++ +  S +  P+A 
Sbjct: 982  SSAPSSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSAPSAS 1041

Query: 377  SKAMP 391
            S + P
Sbjct: 1042 SSSAP 1046

 Score = 37.0 bits (84), Expect = 0.60
 Identities = 27/123 (21%), Positives = 57/123 (45%)
 Frame = +2

Query: 23   SLLPSPTTNTSPSSRAASPFLRRRSRMPLALQAAPGMPTSWMAAHHLRPALAFVGDGACP 202
            S  PS +++++PSS ++S      S  P +  ++    +S  A      +       + P
Sbjct: 896  SSAPSASSSSAPSSSSSSAPSASSSSAPSSSSSSAPSASSSSAPSSSSSSAPSASSSSAP 955

Query: 203  VGGPTG*PRRPPASPTTKTSRRAPPRPSATTTRLSSSSMPASATTRSACSRTGCPTALSK 382
                +       ++P++ +S  AP   S++    SSSS P+++++ +  S +  P+A S 
Sbjct: 956  SSSSSAPSASSSSAPSSSSS--APSASSSSAPSSSSSSAPSASSSSAPSSSSSAPSASSS 1013

Query: 383  AMP 391
            + P
Sbjct: 1014 SAP 1016

 Score = 35.8 bits (81), Expect = 1.3
 Identities = 31/134 (23%), Positives = 61/134 (45%), Gaps = 11/134 (8%)
 Frame = +2

Query: 23   SLLPSPTTNTSPSSRAASPFLRRRSRMPLALQAAP-----GMPTSWMAAHHLRPALAFVG 187
            S  PS +++++ SS +++P     S  P +  +AP       P+S  +A     + A   
Sbjct: 668  SSAPSASSSSASSSSSSAP-SASSSSAPSSSSSAPSASSSSAPSSSSSAPSASSSSAPSS 726

Query: 188  DGACPVGGPTG*PRRPPASPTT------KTSRRAPPRPSATTTRLSSSSMPASATTRSAC 349
              + P    +  P    ++P+        +S  AP   S++    SSSS P+++++ +  
Sbjct: 727  SSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSSAPSASSSSAPS 786

Query: 350  SRTGCPTALSKAMP 391
            S +  P+A S + P
Sbjct: 787  SSSSAPSASSSSAP 800

 Score = 34.3 bits (77), Expect = 3.9
 Identities = 29/127 (22%), Positives = 63/127 (48%), Gaps = 4/127 (3%)
 Frame = +2

Query: 23   SLLPSPTTNTSPSSRAASPFLRRRSRMPLALQAAPGMPTSWM-AAHHLRPALAFVGDGAC 199
            S  PS +++++PSS ++S      S  P +  +AP   +S   ++    P+ +     + 
Sbjct: 789  SSAPSASSSSAPSSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSAPSASSSSAPSS 848

Query: 200  PVGGPTG*PRRPPASPTTKTSRRAPPRPSATTT--RLSSSSMPASATTRS-ACSRTGCPT 370
                P+      P+S ++  S  +   PS++++    SSSS P+S+++ + + S +  P+
Sbjct: 849  SSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSSAPSASSSSAPS 908

Query: 371  ALSKAMP 391
            + S + P
Sbjct: 909  SSSSSAP 915

>ref|NP_181536.2| En/Spm-related transposon protein [Arabidopsis thaliana]
          Length = 580

 Score = 42.0 bits (97), Expect = 0.019
 Identities = 34/121 (28%), Positives = 56/121 (46%), Gaps = 2/121 (1%)
 Frame = +2

Query: 38  PTTNTSPSSRAASPFLRRRSRMPLALQAAPGMPTSWMAAHHLRPALAFVGDGACPVGGPT 217
           P T TS  + +++    R         ++PG+ +S  A+   RP+ +         GGP 
Sbjct: 108 PATLTSRLANSSTESAARNHLTSRQQTSSPGLSSSSGASR--RPSSS---------GGPG 156

Query: 218 G*PRRPPASPTTKTSRRAPPRPSATTTR--LSSSSMPASATTRSACSRTGCPTALSKAMP 391
             P  P    +T T+     RPS  T+R  +SS++ P+   +RS  S T  PT +S++  
Sbjct: 157 SRPATPTGRSSTLTANSKSSRPSTPTSRATVSSATRPSLTNSRSTVSATTKPTPMSRSTS 216

Query: 392 L 394
           L
Sbjct: 217 L 217

 Score = 38.9 bits (89), Expect = 0.16
 Identities = 48/147 (32%), Positives = 64/147 (42%), Gaps = 11/147 (7%)
 Frame = +2

Query: 32  PSPTTNTSPS-SRAASPFLRRR----SRMP-LALQAAPGMPTSW----MAAHHLRPALAF 181
           P PT + +P+ SRAASP +R R    S MP  +L+  P + T+     ++A   RP    
Sbjct: 321 PMPTPSKNPALSRAASPTVRSRPWKPSDMPGFSLETPPNLRTTLPERPLSATRGRPGAPS 380

Query: 182 VGDGACPVGGPT-G*PRRPPASPTTKTSRRAPPRPSATTTRLSSSSMPASATTRSACSRT 358
              G+   GGP  G PRR   SP    SR   P  S      S SS+PA     S  S  
Sbjct: 381 SRSGSVEPGGPPGGRPRRQSCSP----SRGRAPMYS------SGSSVPAVNRGYSKASDN 430

Query: 359 GCPTALSKAMPLGLVAAQHVMSCRGLA 439
             P  +   M       + V++ R LA
Sbjct: 431 VSPVMMGTKM------VERVINMRKLA 451



EST assemble image


clone accession position
1 HC057e11_r AV636291 1 512
2 HC010f04_r AV632633 4 632
3 HC055h03_r AV636153 8 610
4 HC057b05_r AV636257 13 629
5 HC013d07_r AV632848 20 625
6 MX053g04_r BP088193 20 230
7 HC046d05_r AV635441 23 630
8 CM036c01_r AV388771 68 335
9 LC021f09_r AV620400 98 631
10 CM050a04_r AV389744 99 395
11 CM037f04_r AV388883 100 652
12 LCL078d11_r AV630409 100 385
13 CM060a07_r AV390773 101 724
14 CM022g04_r AV387833 101 711
15 LC093b05_r AV625472 102 384
16 HC053a01_r AV635937 103 598
17 LC079b08_r AV624541 103 610
18 LC076c02_r AV624329 103 672
19 LC050c10_r AV622484 103 505
20 LC018e03_r AV620165 103 643
21 LC068a03_r AV623737 103 593
22 MX049a02_r BP087995 103 486
23 LC082g04_r AV624789 103 672
24 LC073c05_r AV624122 104 615
25 HC059g05_r AV636459 105 690
26 CM066b10_r AV390807 105 710
27 HC034g06_r AV634543 105 628
28 CM062e03_r AV390176 106 733
29 HC080b03_r AV637972 106 629
30 HC080c08_r AV637986 106 567
31 CM088c11_r AV393021 106 758
32 CM019g03_r AV387305 106 706
33 CM014h05_r AV387400 106 720
34 CL21d01_r AV394375 106 626
35 HC038c03_r AV634812 106 675
36 CM061e08_r AV390612 106 717
37 LC089c06_r AV625207 107 636
38 CM027h09_r AV387602 108 747
39 LCL014h06_r AV626753 108 492
40 MX054a01_r BP088205 108 631
41 HC033d11_r AV634442 108 678
42 CM044h08_r AV389559 108 705
43 CM030b03_r AV397421 108 758
44 MX068d06_r BP088767 108 557
45 CM080b05_r AV392044 108 751
46 MX214g10_r BP089844 108 586
47 HC048h06_r AV635636 108 609
48 HC048a06_r AV635571 108 635
49 HC025f12_r AV633821 108 660
50 CM048b03_r AV389067 108 438
51 LC058a09_r AV623035 109 545
52 CM043c01_r AV389459 110 304
53 LCL024a12_r AV627267 110 645
54 CM087a08_r AV392471 110 687
55 CM014a03_r AV387380 110 729
56 LCL025d07_r AV627349 110 574
57 HC003b11_r AV632043 112 537
58 LC034a10_r AV621297 112 643
59 HC095h06_r AV639172 112 536
60 LC034c04_r AV621313 112 667
61 HC039b10_r AV634879 113 633
62 HC062b09_r AV636638 113 658
63 MX017g03_r BP086827 113 531
64 MX018a02_r BP086836 113 537
65 CL55e09_r AV396010 113 688
66 CM044g07_r AV389572 113 690
67 HC053c07_r AV635956 113 608
68 LC094f08_r AV625563 113 507
69 HC099e05_r AV639447 113 567
70 LCL096b05_r AV631557 113 606
71 CM099f12_r AV393160 114 628
72 LC089a12_r AV625191 114 646
73 CM037d02_r AV388839 114 642
74 LC048h06_r AV622379 114 672
75 LC020a09_r AV620284 114 634
76 CM076a12_r AV391716 114 715
77 LC080h10_r AV624664 114 632
78 CM055f04_r AV390260 115 741
79 MX237e12_r BP091359 116 373
80 HC078e08_r AV637858 116 633
81 CM026c03_r AV387560 117 710
82 MX017h12_r BP086834 118 555
83 CM059e04_r AV390668 118 781
84 HC049h01_r AV635707 118 615
85 CM046e11_r AV387995 118 421
86 HC074e09_r AV637552 118 604
87 HC022d03_r AV633566 118 601
88 HC072d05_r AV637377 118 687
89 CM092d05_r AV392660 118 566
90 HCL076g11_r AV643830 118 643
91 CM099h03_r AV393155 119 689
92 MX045e06_r BP087875 119 634
93 HC059e06_r AV636441 119 691
94 CM034h04_r AV388615 120 644
95 MXL017h03_r BP094079 122 702
96 MXL014h06_r BP093864 122 609
97 HC030a02_r AV634159 122 658
98 HC039d08_r AV634898 122 654
99 CM032a12_r AV388468 124 715
100 LC069d12_r AV623844 124 646
101 LC057c10_r AV622978 125 640
102 CL71c01_r AV396898 125 690
103 HC083f09_r AV638238 125 483
104 LCL048h04_r AV628911 126 375
105 CL49h09_r AV397728 129 714
106 HC001c08_r AV631886 129 580
107 HC069a07_r AV637123 135 584
108 HC062f10_r AV636674 154 617
109 HC031b02_r AV634256 159 704
110 HC019b06_r AV633299 205 707
111 MX051h09_r BP088111 639 1067
112 HC067b02_r AV636988 683 1124
113 HC028f03_r AV634051 758 1248
114 HCL096h07_r AV645007 1017 1210




Chlamydomonas reinhardtii
Kazusa DNA Research Institute