Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC000335A_C01 KCC000335A_c01
(563 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAG33966.1|AF229246_1 SCAND2 [Homo sapiens] gi|11345048|gb|AA... 42 0.006
ref|NP_071333.2| SCAN domain-containing protein 2 isoform 1; SCA... 42 0.006
dbj|BAC10714.1| P0431H09.26 [Oryza sativa (japonica cultivar-gro... 42 0.007
gb|AAQ13694.1|AF184211_1 MST148 protein [Homo sapiens] 41 0.010
pir||WMBE38 infected cell protein ICP34.5 - human herpesvirus 1 ... 41 0.010
>gb|AAG33966.1|AF229246_1 SCAND2 [Homo sapiens] gi|11345048|gb|AAG34567.1|AF244812_1 SCAN
domain-containing protein 2 [Homo sapiens]
Length = 306
Score = 42.0 bits (97), Expect = 0.006
Identities = 41/124 (33%), Positives = 55/124 (44%), Gaps = 6/124 (4%)
Frame = +2
Query: 203 SVVASAGASRRCYRDQELGHAS*CRARAAPRAAATSACPPGCWARRTRRCSRTCARWSPS 382
S + AG R C C A AAP AA +++ RT R + +CAR + +
Sbjct: 169 STASCAGRWRTC-----------CAAAAAPSAARSASA-------RTGRSTSSCARAARA 210
Query: 383 YSATPPSLSTRLRLLRLSSPLPVR-PGITTWTP---MPCGSA--SHRPQQPPPRRPHPHQ 544
SAT +L+ R PL R PG W P G+A +P+Q P RP P +
Sbjct: 211 PSATEGALT---RTPAPRRPLQRRRPGTGPWRPGRQRGAGTAPPGTQPRQRPSPRPTPRR 267
Query: 545 PAPR 556
P PR
Sbjct: 268 PRPR 271
>ref|NP_071333.2| SCAN domain-containing protein 2 isoform 1; SCAN domain-containing
2 [Homo sapiens] gi|15991817|ref|NP_378659.1| SCAN
domain-containing protein 2 isoform 1; SCAN
domain-containing 2 [Homo sapiens]
gi|15991819|ref|NP_378660.1| SCAN domain-containing
protein 2 isoform 1; SCAN domain-containing 2 [Homo
sapiens] gi|15991821|ref|NP_378661.1| SCAN
domain-containing protein 2 isoform 1; SCAN
domain-containing 2 [Homo sapiens]
gi|15991823|ref|NP_378662.1| SCAN domain-containing
protein 2 isoform 1; SCAN domain-containing 2 [Homo
sapiens] gi|29839632|sp|Q9GZW5|SDP2_HUMAN SCAN
domain-containing protein 2
Length = 306
Score = 42.0 bits (97), Expect = 0.006
Identities = 41/124 (33%), Positives = 55/124 (44%), Gaps = 6/124 (4%)
Frame = +2
Query: 203 SVVASAGASRRCYRDQELGHAS*CRARAAPRAAATSACPPGCWARRTRRCSRTCARWSPS 382
S + AG R C C A AAP AA +++ RT R + +CAR + +
Sbjct: 169 STASCAGRWRTC-----------CAAAAAPSAARSASA-------RTGRSTSSCARAARA 210
Query: 383 YSATPPSLSTRLRLLRLSSPLPVR-PGITTWTP---MPCGSA--SHRPQQPPPRRPHPHQ 544
SAT +L+ R PL R PG W P G+A +P+Q P RP P +
Sbjct: 211 PSATEGALT---RTPAPRRPLQRRRPGTGPWRPGRQRGAGTAPPGTQPRQRPSPRPTPRR 267
Query: 545 PAPR 556
P PR
Sbjct: 268 PRPR 271
>dbj|BAC10714.1| P0431H09.26 [Oryza sativa (japonica cultivar-group)]
Length = 199
Score = 41.6 bits (96), Expect = 0.007
Identities = 40/142 (28%), Positives = 53/142 (37%), Gaps = 12/142 (8%)
Frame = +2
Query: 167 KPCRPQLSGNHDSVVASAGASRRCYRDQELGHAS*CRARAAPRAAATSA-CPPGCWARRT 343
+P RP ASA A R R H+ CR R P +A+ +A C
Sbjct: 27 RPPRPPPPSALSPAAASAAAVRAIARHDRRRHSRRCRPRPPPSSASPAAVCSVTGHGHAV 86
Query: 344 RRCSRTCARWSPSYSATPPSLST-----------RLRLLRLSSPLPVRPGITTWTPMPCG 490
R R P SA P+ +T R LR P P P +++ T
Sbjct: 87 ARRPRRRPPRPPPPSALSPAAATAAVRAIAGRGLSYRSLRRHPPRPSLPSVSSLT----- 141
Query: 491 SASHRPQQPPPRRPHPHQPAPR 556
A+ + P RRP PH+ PR
Sbjct: 142 -ATSAVVREPRRRPRPHRRPPR 162
>gb|AAQ13694.1|AF184211_1 MST148 protein [Homo sapiens]
Length = 157
Score = 41.2 bits (95), Expect = 0.010
Identities = 33/92 (35%), Positives = 39/92 (41%), Gaps = 3/92 (3%)
Frame = +2
Query: 284 AAPRAAATSACPPGCWARRTRRCSRTCARWSPSYSATPPSLSTRLRLLRLSSPLPV-RPG 460
A+P A A SAC C RR +R W P SA+ ST R R S P P+ R
Sbjct: 44 ASPTATARSAC--SCCVPVVRRRARARCAWWPRASASASPASTTSRSSRTSGPRPLGRRR 101
Query: 461 ITTWTPMPCGSASHRP--QQPPPRRPHPHQPA 550
+ P P RP + P RP P PA
Sbjct: 102 AGSRGPAPGAPKPTRPSWRTPTRARPRPSPPA 133
>pir||WMBE38 infected cell protein ICP34.5 - human herpesvirus 1 (strain F)
gi|330123|gb|AAA45794.1| infected cell protein
Length = 358
Score = 41.2 bits (95), Expect = 0.010
Identities = 22/59 (37%), Positives = 27/59 (45%)
Frame = -2
Query: 502 MRGAPAGHRGPRRDSRPHWQGAAEPEQPQPRTQARGRRAV*GTPASACPGAPSCPPSPA 326
+ G P H GPRR P GA QPQ + AV PA+A P P+ P P+
Sbjct: 15 LHGPPRRHAGPRRPRPPGPTGAVPTAQPQVTSTPNSEPAVRSAPAAAPPPPPASGPPPS 73
