Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC000330A_C01 KCC000330A_c01
(721 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_747389.1| phosphomannomutase [Pseudomonas putida KT2440] ... 34 2.0
ref|ZP_00007446.1| COG0162: Tyrosyl-tRNA synthetase [Rhodobacter... 33 3.4
ref|XP_303150.1| hypothetical protein XP_303150 [Homo sapiens] 33 3.4
ref|XP_320787.1| ENSANGP00000014028 [Anopheles gambiae] gi|30174... 33 3.4
pir||S41644 polyadenylate-binding protein - fruit fly (Drosophil... 33 4.4
>ref|NP_747389.1| phosphomannomutase [Pseudomonas putida KT2440]
gi|33300965|sp|Q88C93|ALGC_PSEPK
Phosphomannomutase/phosphoglucomutase (PMM / PGM)
gi|24987093|gb|AAN70853.1|AE016729_11 phosphomannomutase
[Pseudomonas putida KT2440]
Length = 463
Score = 34.3 bits (77), Expect = 2.0
Identities = 17/39 (43%), Positives = 22/39 (55%)
Frame = -1
Query: 364 AHGVPFGTPDCCTRLSGLRGRVGRTLRTRLHAHWLGRVV 248
AH VP PD R +RG VG+TL A+W+GR +
Sbjct: 2 AHLVPAALPDSIFRAYDIRGVVGKTLHAET-AYWIGRAI 39
>ref|ZP_00007446.1| COG0162: Tyrosyl-tRNA synthetase [Rhodobacter sphaeroides]
Length = 675
Score = 33.5 bits (75), Expect = 3.4
Identities = 20/53 (37%), Positives = 25/53 (46%)
Frame = +3
Query: 303 RPRRPDKRVQQSGVPNGTPCASALHMNTKGESHDQLPRHGGP*CCGPYLLFIR 461
RP+RPD+ Q G P+ T + H S D PRH GP P F+R
Sbjct: 223 RPQRPDRSALQHGFPSTTAPDISRH-----HSRDDRPRHEGPMTYHPKSDFLR 270
>ref|XP_303150.1| hypothetical protein XP_303150 [Homo sapiens]
Length = 775
Score = 33.5 bits (75), Expect = 3.4
Identities = 26/85 (30%), Positives = 32/85 (37%), Gaps = 4/85 (4%)
Frame = +1
Query: 454 LYGMDAGMNPAGL--PGQNAPPHS--MSSAIRRACPCCMLKTNQLRTPFPIAAQRLGECR 621
L G + P GL PG ++ HS A R P +L +LR P A R G R
Sbjct: 588 LQGQETQERPYGLSGPGFSSAAHSEGQPGAPRARPPHLLLARFRLRGPSGPPAPRGGNTR 647
Query: 622 MMSTPHRAGGHTSCTSQNHSQPGRC 696
P GGH + G C
Sbjct: 648 PFGQPRGPGGHLGSRGRTQDAAGHC 672
>ref|XP_320787.1| ENSANGP00000014028 [Anopheles gambiae] gi|30174183|gb|EAA00055.2|
ENSANGP00000014028 [Anopheles gambiae str. PEST]
Length = 1352
Score = 33.5 bits (75), Expect = 3.4
Identities = 28/96 (29%), Positives = 38/96 (39%), Gaps = 5/96 (5%)
Frame = +1
Query: 427 HNVVAHICYLYGMDA--GMNPAGLPGQNAPPHSMSSAIRRACPCCMLKTNQLRTPFPIAA 600
H+ V + GM G N AG GQ H S + P + +T+
Sbjct: 168 HHAVPASYHHQGMSGSGGSNGAG-SGQTPGTHLASPVAKGGAPLGITRTHHHTGTHDFRG 226
Query: 601 -QRLGECRMMSTPHRAGGHTSCTSQNH--SQPGRCG 699
QR+ EC S +R+ GH S + H S PG G
Sbjct: 227 LQRVNECHSSSDENRSSGHASMSDTGHGSSSPGGVG 262
>pir||S41644 polyadenylate-binding protein - fruit fly (Drosophila melanogaster)
gi|304798|gb|AAA28828.1| polyadenylate-binding protein
gi|304800|gb|AAA02941.1| polyadenylate-binding protein
Length = 465
Score = 33.1 bits (74), Expect = 4.4
Identities = 21/66 (31%), Positives = 32/66 (47%)
Frame = +1
Query: 415 ATAVHNVVAHICYLYGMDAGMNPAGLPGQNAPPHSMSSAIRRACPCCMLKTNQLRTPFPI 594
A A NV A + + AG AG+PGQ +++A A P M+ Q+ +P
Sbjct: 311 AAASANVAAAVAANAAVAAG---AGMPGQMMTQQQIAAATGAAIPGQMMTPQQIAAQYPY 367
Query: 595 AAQRLG 612
A Q++G
Sbjct: 368 AYQQMG 373
