KCC000316A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC000316A_C01 KCC000316A_c01
AACATAAAGTACAAACTACAAGAGACTTACAACCACATAAAAGCAAACCTTTCCACGACT
ACTTGCGTAAGCAATAGCACTTGACCCTACAACAGAATCGCGATGTCGACCCGGCTTACA
CTGCGGCGAATCGAGTCGGCCCACAGCTCTGCACGAGGGCTCCATCACCTGCTTCCACCA
GTGCACACCGTATGTAGCGCACCACACTCGCCACGGGGTAGCTCCTGCGGCCCGCTTCAA
GCGGCTGCTTCGGCTTCCTTTTCAGCTTCCTTTGGCGTAGGCGCCCCAGTGCTGGAATCT
GCACCTGCATCGCCAGCAGAGACCTTCCTTAGCCGATACGCGCTGGGCAAGACCCTTGGG
CAGGGGGCCTATGGAATGGTGCACACCGCTCTCAACAAAGCGACAGGCGAGGAGGTGGCT
GTCAAAGTCGTCGCGAAACAGCGTAACGCAGGTCGCAACCAGCGTGGATCATTGCACCGG
GAGGCACAACTCTGGAAGCGGGCTTGCGTTGCTTCACGGCAAGCGTGCCAGTTCTTCGCC
ATCGAGGAAGACGCCGTCAACTACTACATCATCTCGGAG


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC000316A_C01 KCC000316A_c01
         (579 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

dbj|BAA81748.1| calcium-dependent protein kinase [Marchantia pol...    53  3e-06
dbj|BAA81749.1| calcium-dependent protein kinase [Marchantia pol...    53  3e-06
emb|CAB40826.2| serine threonine protein kinase [Sclerotinia scl...    53  3e-06
ref|NP_725902.1| CG30132-PG [Drosophila melanogaster] gi|2162693...    52  6e-06
gb|AAQ22409.1| SD05712p [Drosophila melanogaster]                      52  6e-06

>dbj|BAA81748.1| calcium-dependent protein kinase [Marchantia polymorpha]
           gi|5162880|dbj|BAA81750.1| calcium-dependent protein
           kinase [Marchantia polymorpha]
          Length = 548

 Score = 53.1 bits (126), Expect = 3e-06
 Identities = 38/142 (26%), Positives = 60/142 (41%), Gaps = 7/142 (4%)
 Frame = +1

Query: 175 PPVHTVCSAPHSPRGSSCGPLQAAASASFSASFGVGAPVLESAPA-------SPAETFLS 333
           P    V     +P+GS  G   A  SA  S    +G    +  P         P E   S
Sbjct: 20  PAATNVQRGTGAPQGSHGGSGAAGVSAQASHPAPLGGISAKQKPTLTGNVLGRPLEDVRS 79

Query: 334 RYALGKTLGQGAYGMVHTALNKATGEEVAVKVVAKQRNAGRNQRGSLHREAQLWKRACVA 513
            Y LG+ LG+G +G+ H   +K TGE +A K +AK++   ++    + RE Q+       
Sbjct: 80  IYTLGRELGRGQFGVTHLCTHKVTGELLACKSIAKRKLTNKDDVEDVRREVQIMHH-LEG 138

Query: 514 SRQACQFFAIEEDAVNYYIISE 579
            +   +     ED  N +++ E
Sbjct: 139 QKNIVELKGAYEDKHNVHLVME 160

>dbj|BAA81749.1| calcium-dependent protein kinase [Marchantia polymorpha]
           gi|5162882|dbj|BAA81751.1| calcium-dependent protein
           kinase [Marchantia polymorpha]
          Length = 548

 Score = 53.1 bits (126), Expect = 3e-06
 Identities = 38/142 (26%), Positives = 60/142 (41%), Gaps = 7/142 (4%)
 Frame = +1

Query: 175 PPVHTVCSAPHSPRGSSCGPLQAAASASFSASFGVGAPVLESAPA-------SPAETFLS 333
           P    V     +P+GS  G   A  SA  S    +G    +  P         P E   S
Sbjct: 20  PAATNVQRGTGAPQGSHGGSGAAGVSAQASHPAPLGGISAKQKPTLTGNVLGRPLEDVRS 79

Query: 334 RYALGKTLGQGAYGMVHTALNKATGEEVAVKVVAKQRNAGRNQRGSLHREAQLWKRACVA 513
            Y LG+ LG+G +G+ H   +K TGE +A K +AK++   ++    + RE Q+       
Sbjct: 80  IYTLGRELGRGQFGVTHLCTHKVTGELLACKSIAKRKLTNKDDVEDVRREVQIMHH-LEG 138

Query: 514 SRQACQFFAIEEDAVNYYIISE 579
            +   +     ED  N +++ E
Sbjct: 139 QKNIVELKGAYEDKHNVHLVME 160

>emb|CAB40826.2| serine threonine protein kinase [Sclerotinia sclerotiorum]
          Length = 765

 Score = 52.8 bits (125), Expect = 3e-06
 Identities = 22/66 (33%), Positives = 44/66 (66%)
 Frame = +1

Query: 292 LESAPASPAETFLSRYALGKTLGQGAYGMVHTALNKATGEEVAVKVVAKQRNAGRNQRGS 471
           +ESAP    E  +  Y++ +TLG+G++G V  A+++ T ++VA+K++A+++   R+  G 
Sbjct: 44  MESAPQKKTEQRVGAYSVVRTLGEGSFGKVKLAVHRVTQQQVALKIIARRKLISRDMAGR 103

Query: 472 LHREAQ 489
           + RE +
Sbjct: 104 VEREIE 109

>ref|NP_725902.1| CG30132-PG [Drosophila melanogaster] gi|21626932|gb|AAF57549.2|
           CG30132-PG [Drosophila melanogaster]
          Length = 1098

 Score = 52.0 bits (123), Expect = 6e-06
 Identities = 52/177 (29%), Positives = 80/177 (44%), Gaps = 12/177 (6%)
 Frame = +1

Query: 85  PYN-----RIAMSTRLTLR-RIESAHSSARGLHHLLPPVHTVCSAPHSPRGSSCGPLQAA 246
           PYN      +  STR ++  R  S H S  G     PPV       H P  S    + A 
Sbjct: 393 PYNSSRAEHVTSSTRHSVDPRSHSGHESRSGTASTHPPVG------HHPT-SRVPSVVAN 445

Query: 247 ASASFSASFGVGAPVLESAPASP-----AETFLSRYALGKTLGQGAYGMVHTALNKATGE 411
            S  +S +   G+P ++   ++P      E  + +Y L KT+G+G +  V  A +  TG+
Sbjct: 446 RSNVYSNNAAQGSPNMQMRSSAPMRWRATEEHIGKYKLIKTIGKGNFAKVKLAKHLPTGK 505

Query: 412 EVAVKVVAK-QRNAGRNQRGSLHREAQLWKRACVASRQACQFFAIEEDAVNYYIISE 579
           EVA+K++ K Q N G  Q+  L RE ++ K   +      + F + E     Y+I E
Sbjct: 506 EVAIKIIDKTQLNPGSLQK--LFREVRIMK--MLDHPNIVKLFQVIETEKTLYLIME 558

>gb|AAQ22409.1| SD05712p [Drosophila melanogaster]
          Length = 1046

 Score = 52.0 bits (123), Expect = 6e-06
 Identities = 52/177 (29%), Positives = 80/177 (44%), Gaps = 12/177 (6%)
 Frame = +1

Query: 85  PYN-----RIAMSTRLTLR-RIESAHSSARGLHHLLPPVHTVCSAPHSPRGSSCGPLQAA 246
           PYN      +  STR ++  R  S H S  G     PPV       H P  S    + A 
Sbjct: 393 PYNSSRAEHVTSSTRHSVDPRSHSGHESRSGTASTHPPVG------HHPT-SRVPSVVAN 445

Query: 247 ASASFSASFGVGAPVLESAPASP-----AETFLSRYALGKTLGQGAYGMVHTALNKATGE 411
            S  +S +   G+P ++   ++P      E  + +Y L KT+G+G +  V  A +  TG+
Sbjct: 446 RSNVYSNNAAQGSPNMQMRSSAPMRWRATEEHIGKYKLIKTIGKGNFAKVKLAKHLPTGK 505

Query: 412 EVAVKVVAK-QRNAGRNQRGSLHREAQLWKRACVASRQACQFFAIEEDAVNYYIISE 579
           EVA+K++ K Q N G  Q+  L RE ++ K   +      + F + E     Y+I E
Sbjct: 506 EVAIKIIDKTQLNPGSLQK--LFREVRIMK--MLDHPNIVKLFQVIETEKTLYLIME 558



EST assemble image


clone accession position
1 LCL039b11_r AV628255 1 522
2 CL32a07_r AV394862 11 519
3 CL71c10_r AV396872 11 527
4 CL35g06_r AV395066 11 517
5 HCL056a06_r AV642682 29 531
6 HCL027f10_r AV641094 35 495
7 CL65d05_r AV396561 37 545
8 HCL088e01_r AV644434 37 525
9 HCL075d03_r AV643750 41 525
10 CL19a07_r AV394185 44 583
11 CL56b02_r AV396094 49 556
12 LCL046g03_r AV628764 49 528
13 HCL016f12_r AV640462 55 486
14 LCL046d08_r AV628739 55 514
15 HCL021d04_r AV640727 78 488
16 CL29e08_r AV394630 79 585
17 CL43d10_r AV395548 110 557
18 HCL040h11_r AV641826 122 590




Chlamydomonas reinhardtii
Kazusa DNA Research Institute