Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC000311A_C01 KCC000311A_c01
(721 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAA69928.1| cytoplasmic ribosomal protein L18 285 5e-76
ref|NP_187210.1| 60S ribosomal protein L18 (RPL18B) [Arabidopsis... 284 1e-75
gb|AAK70908.1|AC087551_7 cytoplasmic ribosomal protein L18 [Oryz... 282 4e-75
ref|NP_198137.1| 60S ribosomal protein L18 (RPL18C) [Arabidopsis... 281 5e-75
dbj|BAC83538.1| putative cytoplasmic ribosomal protein L18 [Oryz... 278 6e-74
>gb|AAA69928.1| cytoplasmic ribosomal protein L18
Length = 187
Score = 285 bits (729), Expect = 5e-76
Identities = 143/187 (76%), Positives = 160/187 (85%)
Frame = +2
Query: 20 MGIDLKAGGRSKKVHRTAPKSQNVYLALLVKLYRFLVRRTESKFNKVILKRLFMSKTNRP 199
MGIDL AGG+SKK RTAPKS +VYL L VKLYRFLVRRT SKFN VILKRLFMSK NR
Sbjct: 1 MGIDLIAGGKSKKTKRTAPKSDDVYLKLTVKLYRFLVRRTNSKFNGVILKRLFMSKVNRA 60
Query: 200 PLSLSKLAAFMKGKESKVAVIVATVTDDVRLFEVPKLRVCALRFTETARARITKAGGECL 379
PLSLS+L FM GKE K+AV+V T+TDD+R+ E+P ++V ALRFTE ARARI KAGGECL
Sbjct: 61 PLSLSRLVEFMTGKEDKIAVLVGTITDDLRVHEIPAMKVTALRFTERARARIEKAGGECL 120
Query: 380 TFDQLALQRPTGKDCVLLRGPKSQREACKHFGPAPGVPGSTTKPYVRAKGRKFEKARGRR 559
TFDQLAL+ P G++ VLLRGPK+ REA KHFGPAPGVP S +KPYVRAKGRKFEKARG+R
Sbjct: 121 TFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRAKGRKFEKARGKR 180
Query: 560 KSRGFKV 580
KSRGFKV
Sbjct: 181 KSRGFKV 187
>ref|NP_187210.1| 60S ribosomal protein L18 (RPL18B) [Arabidopsis thaliana]
gi|21431838|sp|P42791|RL18_ARATH 60S ribosomal protein
L18 gi|6714451|gb|AAF26138.1|AC011620_14 putative 60S
ribosomal protein L18 [Arabidopsis thaliana]
gi|14335090|gb|AAK59824.1| AT3g05590/F18C1_14
[Arabidopsis thaliana] gi|16974509|gb|AAL31164.1|
AT3g05590/F18C1_14 [Arabidopsis thaliana]
Length = 187
Score = 284 bits (726), Expect = 1e-75
Identities = 142/187 (75%), Positives = 160/187 (84%)
Frame = +2
Query: 20 MGIDLKAGGRSKKVHRTAPKSQNVYLALLVKLYRFLVRRTESKFNKVILKRLFMSKTNRP 199
MGIDL AGG+SKK RTAPKS +VYL L VKLYRFLVRRT SKFN VILKRLFMSK N+
Sbjct: 1 MGIDLIAGGKSKKTKRTAPKSDDVYLKLTVKLYRFLVRRTNSKFNGVILKRLFMSKVNKA 60
Query: 200 PLSLSKLAAFMKGKESKVAVIVATVTDDVRLFEVPKLRVCALRFTETARARITKAGGECL 379
PLSLS+L FM GKE K+AV+V T+TDD+R+ E+P ++V ALRFTE ARARI KAGGECL
Sbjct: 61 PLSLSRLVEFMTGKEDKIAVLVGTITDDLRVHEIPAMKVTALRFTERARARIEKAGGECL 120
Query: 380 TFDQLALQRPTGKDCVLLRGPKSQREACKHFGPAPGVPGSTTKPYVRAKGRKFEKARGRR 559
TFDQLAL+ P G++ VLLRGPK+ REA KHFGPAPGVP S +KPYVRAKGRKFEKARG+R
Sbjct: 121 TFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRAKGRKFEKARGKR 180
Query: 560 KSRGFKV 580
KSRGFKV
Sbjct: 181 KSRGFKV 187
>gb|AAK70908.1|AC087551_7 cytoplasmic ribosomal protein L18 [Oryza sativa]
Length = 188
Score = 282 bits (721), Expect = 4e-75
Identities = 144/188 (76%), Positives = 162/188 (85%), Gaps = 1/188 (0%)
Frame = +2
Query: 20 MGIDLKAGGRSKKVHRTAPKSQNVYLALLVKLYRFLVRRTESKFNKVILKRLFMSKTNRP 199
MGIDL AGGR+KK RTAP+S +VYL LLVKLYRFLVRRT+S FN VILKRLFMSKTNRP
Sbjct: 1 MGIDLVAGGRNKKTKRTAPRSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSKTNRP 60
Query: 200 PLSLSKLAAFMKGKE-SKVAVIVATVTDDVRLFEVPKLRVCALRFTETARARITKAGGEC 376
PLSL +LA FM+GKE + +AVIV TVTDD R+ E+PK++V ALRFTETARARI AGGEC
Sbjct: 61 PLSLRRLAKFMEGKEENNIAVIVGTVTDDKRIQEIPKMKVTALRFTETARARIVNAGGEC 120
Query: 377 LTFDQLALQRPTGKDCVLLRGPKSQREACKHFGPAPGVPGSTTKPYVRAKGRKFEKARGR 556
LTFDQLAL+ P G++ VLLRGPK+ REA +HFG APGVP S TKPYVR+KGRKFEKARGR
Sbjct: 121 LTFDQLALRAPLGENTVLLRGPKNAREAVRHFGKAPGVPHSHTKPYVRSKGRKFEKARGR 180
Query: 557 RKSRGFKV 580
R SRGFKV
Sbjct: 181 RNSRGFKV 188
>ref|NP_198137.1| 60S ribosomal protein L18 (RPL18C) [Arabidopsis thaliana]
gi|15810153|gb|AAL07220.1| putative 60S ribosomal
protein [Arabidopsis thaliana]
gi|21689771|gb|AAM67529.1| putative 60S ribosomal
protein [Arabidopsis thaliana]
gi|23397141|gb|AAN31854.1| putative 60S ribosomal
protein [Arabidopsis thaliana]
Length = 187
Score = 281 bits (720), Expect = 5e-75
Identities = 140/187 (74%), Positives = 159/187 (84%)
Frame = +2
Query: 20 MGIDLKAGGRSKKVHRTAPKSQNVYLALLVKLYRFLVRRTESKFNKVILKRLFMSKTNRP 199
MGIDL AGG+SKK RTAPKS +VYL LLVKLYRFLVRR+ S FN VILKRLFMSK N+
Sbjct: 1 MGIDLIAGGKSKKTKRTAPKSDDVYLKLLVKLYRFLVRRSNSNFNAVILKRLFMSKVNKA 60
Query: 200 PLSLSKLAAFMKGKESKVAVIVATVTDDVRLFEVPKLRVCALRFTETARARITKAGGECL 379
PLSLS+L FM GK+ K+AV+V T+TDD+R+ E+P ++V ALRFTE ARARI KAGGECL
Sbjct: 61 PLSLSRLVEFMTGKDDKIAVLVGTITDDLRVHEIPAMKVTALRFTERARARIEKAGGECL 120
Query: 380 TFDQLALQRPTGKDCVLLRGPKSQREACKHFGPAPGVPGSTTKPYVRAKGRKFEKARGRR 559
TFDQLAL+ P G++ VLLRGPK+ REA KHFGPAPGVP S TKPYVR KGRKFEKARG+R
Sbjct: 121 TFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSNTKPYVRHKGRKFEKARGKR 180
Query: 560 KSRGFKV 580
KSRGFKV
Sbjct: 181 KSRGFKV 187
>dbj|BAC83538.1| putative cytoplasmic ribosomal protein L18 [Oryza sativa (japonica
cultivar-group)]
Length = 195
Score = 278 bits (711), Expect = 6e-74
Identities = 141/195 (72%), Positives = 162/195 (82%), Gaps = 8/195 (4%)
Frame = +2
Query: 20 MGIDLKAGGRSKKVHRTAPKSQNVYLALLVKLYRFLVRRTESKFNKVILKRLFMSKTNRP 199
MGIDL AGGR+KK RTAP+S++VYL L+VKLYRFLVRRT+S FN VILKRLFMSKTNRP
Sbjct: 1 MGIDLVAGGRNKKTKRTAPRSEDVYLKLIVKLYRFLVRRTKSHFNAVILKRLFMSKTNRP 60
Query: 200 PLSLSKLAAFMKGKE--------SKVAVIVATVTDDVRLFEVPKLRVCALRFTETARARI 355
PLS+ +L FM+GK ++AVIV TVTDD R++EVP ++V ALRFTETARARI
Sbjct: 61 PLSMRRLVRFMEGKVPDRHAISGDQIAVIVGTVTDDKRIYEVPAMKVAALRFTETARARI 120
Query: 356 TKAGGECLTFDQLALQRPTGKDCVLLRGPKSQREACKHFGPAPGVPGSTTKPYVRAKGRK 535
AGGECLTFDQLAL+ P G++ VLLRGPK+ REA KHFGPAPGVP S TKPYVR+KGRK
Sbjct: 121 INAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSNTKPYVRSKGRK 180
Query: 536 FEKARGRRKSRGFKV 580
FEKARGRR S+GFKV
Sbjct: 181 FEKARGRRNSKGFKV 195
