Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC000305A_C01 KCC000305A_c01
(949 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_850236.1| expressed protein [Arabidopsis thaliana] gi|204... 89 1e-16
pir||T01360 hypothetical protein At2g34750 [imported] - Arabidop... 81 3e-14
ref|NP_181457.1| hypothetical protein [Arabidopsis thaliana] gi|... 55 2e-06
ref|NP_593674.1| rna polymerase i specific transcription initiat... 52 1e-05
ref|XP_156394.2| expressed sequence AL023001 [Mus musculus] 49 9e-05
>ref|NP_850236.1| expressed protein [Arabidopsis thaliana] gi|20465617|gb|AAM20140.1|
unknown protein [Arabidopsis thaliana]
gi|23296957|gb|AAN13210.1| unknown protein [Arabidopsis
thaliana]
Length = 613
Score = 88.6 bits (218), Expect = 1e-16
Identities = 59/216 (27%), Positives = 110/216 (50%), Gaps = 2/216 (0%)
Frame = +1
Query: 193 LKKGSS--YDELKGLLAECRKRAELDPADDEAVLQLSTLIASVTANVSAIREGKHQALVS 366
+K G S Y E+ G++A K + D + V QL T++ +++ V+ I HQ L+S
Sbjct: 41 VKTGDSDLYSEMVGVMARDIKEFK----DPDVVAQLETVLKALSGAVACIDVLHHQKLLS 96
Query: 367 DILGIRVWSAAPMVLTAVLEFTRNLVVANAAFSHTCFQLLVYSFTPPPAPPNPNDPSQDP 546
+ +++W P V+ A++ +L V + + +C +LV +F PPP N S+
Sbjct: 97 ALFRMKLWDHRPDVMDALVNLVISLAVTSGKYLDSCLNMLVSNFVPPPWVVNNLSHSRIL 156
Query: 547 DGPWRPAEQAVAVHFSLLSVLGRVLGLVPTASTNILPLIVSQMPHKVRDRNTQCLYLSAL 726
+ + + VH +LL ++ LVP + ++P++ QMP + ++ +Y+ +L
Sbjct: 157 N---KKIDVLSRVHAALL----KISILVPLTPSRLVPMLFQQMPKMHKKDHSIVIYVESL 209
Query: 727 FRIAEDRSGAPIREALLTAVVEHLLSLDVEIKWEDI 834
++ G +L V+E L LD+EI+W+DI
Sbjct: 210 LKLENSSIGQVGGSMILGMVMERLRDLDLEIEWDDI 245
>pir||T01360 hypothetical protein At2g34750 [imported] - Arabidopsis thaliana
gi|3132470|gb|AAC16259.1| unknown protein [Arabidopsis
thaliana]
Length = 602
Score = 80.9 bits (198), Expect = 3e-14
Identities = 60/228 (26%), Positives = 110/228 (47%), Gaps = 14/228 (6%)
Frame = +1
Query: 193 LKKGSS--YDELKGLLAECRKRAELDPADDEAVLQLSTLIASVTANVSAIREGKHQALVS 366
+K G S Y E+ G++A K + D + V QL T++ +++ V+ I HQ L+S
Sbjct: 41 VKTGDSDLYSEMVGVMARDIKEFK----DPDVVAQLETVLKALSGAVACIDVLHHQKLLS 96
Query: 367 DILGIRVWSAAPMVLTAVLEFTRNLVVANAAFSHTCFQLLVYSFTPPPAPPNPNDPSQDP 546
+ +++W P V+ A++ +L V + + +C +LV +F PPP N S+
Sbjct: 97 ALFRMKLWDHRPDVMDALVNLVISLAVTSGKYLDSCLNMLVSNFVPPPWVVNNLSHSRIL 156
Query: 547 DGPWRPAEQAVAVHFSLLSVLGRVLGLVPTASTNILPLIVSQMPHKVRDRNTQCLYLSAL 726
+ + + VH +LL ++ LVP + ++P++ QMP + ++ +Y+ +L
Sbjct: 157 N---KKIDVLSRVHAALL----KISILVPLTPSRLVPMLFQQMPKMHKKDHSIVIYVESL 209
Query: 727 FRIAEDRSGAPIREALLTAVVEHLLSLDV------------EIKWEDI 834
++ G +L V+E L LDV EI+W+DI
Sbjct: 210 LKLENSSIGQVGGSMILGMVMERLRDLDVSRQNMLIQLRSLEIEWDDI 257
>ref|NP_181457.1| hypothetical protein [Arabidopsis thaliana] gi|7487048|pir||T02578
hypothetical protein At2g39240 [imported] - Arabidopsis
thaliana gi|3402681|gb|AAC28984.1| unknown protein
[Arabidopsis thaliana]
Length = 545
Score = 54.7 bits (130), Expect = 2e-06
Identities = 54/232 (23%), Positives = 96/232 (41%), Gaps = 10/232 (4%)
Frame = +1
Query: 166 LNSFVADALLKKGSSYDELKGLLAECRKRAELD-------PADDEAVLQLSTLIASVTAN 324
+ +A A Y+EL L+ +K++ D P D + V Q TL+ ++ +
Sbjct: 20 IREVLASAQSGDTDQYNELVQLMYIKKKKSGDDAMAQPEVPDDVDVVAQRETLLKILSHS 79
Query: 325 VSAIREGKHQALVSDILGIRVWSAAPMVLTAVLEFTRNLVVANAAFSHTCFQLLVYSFTP 504
V+ + + H L+ ILG R+W P V+ A+L+ +L + +C LV +
Sbjct: 80 VACLDDVHHNHLLQLILGTRIWDHKPNVIYALLDLIISLATTSGKHLSSCLDTLVSNLRS 139
Query: 505 PPAPPNPNDPSQDPDGPWRPAEQAVAVHFSLLSVLGRVLGLVPTASTNILPLIVSQMP-- 678
P + + E VH + L ++ LVP A + +LP++ MP
Sbjct: 140 QPRKLDN-----------KMLEVLSRVH----AALHKISYLVPLAPSILLPILAQSMPSV 184
Query: 679 HKVRDRNTQCLYLSALFRIAEDR-SGAPIREALLTAVVEHLLSLDVEIKWED 831
H Y+ L ++ G + + +L V+ LD EI+ +D
Sbjct: 185 HDKARLQVVVPYVKNLLKLENSSIIGKVVGKDILMMVMGRFRDLDSEIECDD 236
>ref|NP_593674.1| rna polymerase i specific transcription initiati on factor
[Schizosaccharomyces pombe]
gi|1351726|sp|Q10110|YAQB_SCHPO Hypothetical protein
C18G6.11c in chromosome I gi|7493341|pir||T37924 rna
polymerase i specific transcription initiati on factor -
fission yeast (Schizosaccharomyces pombe)
gi|1122375|emb|CAA92389.1| SPAC18G6.11c
[Schizosaccharomyces pombe]
Length = 599
Score = 52.4 bits (124), Expect = 1e-05
Identities = 58/227 (25%), Positives = 102/227 (44%), Gaps = 6/227 (2%)
Frame = +1
Query: 166 LNSFVADALLKKG----SSYDELKGLLAECRKRAELDPADDEAVLQLSTLIASVTANVSA 333
L +FV AL K + Y++L+ A A+ D D + LQL L++++T NVS
Sbjct: 54 LRAFVNKALDDKAEGNFAGYEDLRRQFA-----AKSDTKDAPSSLQLQNLLSALTCNVSR 108
Query: 334 IREGKHQALVSDILGIRVW-SAAPMVLTAVLEFTRNLVVANAAFSHTCFQLLVYSFTPPP 510
+ + + +LV +L VW S + F NL+ A + + +L+
Sbjct: 109 L-DSSNSSLVMSVLD-SVWVSRDESFVRCYTRFLGNLISAQSNYLPLVMTMLIQHML--- 163
Query: 511 APPNPNDPSQDPDGPWRPAEQAVAVHFSLLSV-LGRVLGLVPTASTNILPLIVSQMPHKV 687
+RP ++A+H+ + L VL LVP A + + I+ + P+K
Sbjct: 164 ---------------YRP--DSLAIHYEHAHMALKYVLELVPRAHSFLYSSILEEFPYKD 206
Query: 688 RDRNTQCLYLSALFRIAEDRSGAPIREALLTAVVEHLLSLDVEIKWE 828
Q Y+S + I E I+ +L A+++ ++ +DVEI+ E
Sbjct: 207 ESLLAQMTYISNVLSICE--YVPSIKGPVLHAIIDKIIQIDVEIQVE 251
>ref|XP_156394.2| expressed sequence AL023001 [Mus musculus]
Length = 656
Score = 49.3 bits (116), Expect = 9e-05
Identities = 42/165 (25%), Positives = 69/165 (41%), Gaps = 2/165 (1%)
Frame = +1
Query: 352 QALVSDILGIRVWSAAPMVLTAVLEFTRNLVVANAAFSHTCFQLLVYSFTPPPAPPNPN- 528
+ L++ IL + + + V+ L F NLV A F C ++ F PP
Sbjct: 105 EQLINIILRLPWLNRSQRVVEEYLAFLGNLVSAQTVFLRPCLSMIASHFVPPRVIVKEGG 164
Query: 529 -DPSQDPDGPWRPAEQAVAVHFSLLSVLGRVLGLVPTASTNILPLIVSQMPHKVRDRNTQ 705
D S D + A+ + L + VP+ ++P++V + P + T
Sbjct: 165 IDVSDSDD----EDDNLPAIFDTCHRALQIITRYVPSTPWFLMPILVEKFPFVRKSERTL 220
Query: 706 CLYLSALFRIAEDRSGAPIREALLTAVVEHLLSLDVEIKWEDIVD 840
Y+ L RI+ +R +L V+E LL LDV + +DI D
Sbjct: 221 ECYVHNLLRIS--LYFPTLRREILELVIEKLLKLDVSVSRQDIED 263
