Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC000291A_C01 KCC000291A_c01
(767 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_767161.1| blr0521 [Bradyrhizobium japonicum] gi|27348769|... 53 5e-06
gb|AAK95470.1| LF3 [cercopithicine herpesvirus 15] 50 4e-05
dbj|BAC87637.1| unnamed protein product [Homo sapiens] 50 5e-05
gb|AAC82365.1| unknown [Myxococcus xanthus] 49 9e-05
ref|ZP_00058982.1| COG0532: Translation initiation factor 2 (IF-... 49 9e-05
>ref|NP_767161.1| blr0521 [Bradyrhizobium japonicum] gi|27348769|dbj|BAC45786.1|
blr0521 [Bradyrhizobium japonicum USDA 110]
Length = 745
Score = 53.1 bits (126), Expect = 5e-06
Identities = 49/168 (29%), Positives = 58/168 (34%), Gaps = 3/168 (1%)
Frame = -2
Query: 760 APGPAACSRRWRARSAPPPPGTGSTAPDPTPRSDPRPCCGTSSPCTSPPHPAASPRSWQP 581
AP PAA R A PPPP AP P P P + P +P A +P P
Sbjct: 82 APPPAAAPPRPAAPPPPPPPPAARPAPPPPPPPPAAPKQPSPPPAAAPQQHAPTP----P 137
Query: 580 PAAPAGLRAASRRTFRRTAARPGH---*PAVATERRRATWP*PRAADGGGRSSPTRDPAP 410
P AP R A AA P H P R T P P A R +P P
Sbjct: 138 PPAPPAARPAPTPPAPPPAAAPQHAPPPPPPPAARPTPTPPPPPPAGPAARPTPAPTATP 197
Query: 409 DAMAQMPRHLCCCVDRCSQCSGSPNSSAPPRLSVHAGPCSVS*PEKVP 266
+A P + GSP +A P + P + P P
Sbjct: 198 TPVAPPPA-------APTARPGSPAPAATPAPTPTPAPTATPAPTATP 238
Score = 46.6 bits (109), Expect = 4e-04
Identities = 42/148 (28%), Positives = 51/148 (34%), Gaps = 25/148 (16%)
Frame = -2
Query: 757 PGPAACSRRWRARSAPPPPGTGSTAPDPTPRSDPRPCC----------GTSSPCTSP--- 617
P P + R PPPP + P P P + P P G+ +P +P
Sbjct: 164 PPPPPPAARPTPTPPPPPPAGPAARPTPAPTATPTPVAPPPAAPTARPGSPAPAATPAPT 223
Query: 616 --PHPAASPRSWQPPA--APAGLRAASRRTFRRTAARPGH*PAVATERRRATWP*PRA-- 455
P P A+P PA + G A R RPG PA + P P
Sbjct: 224 PTPAPTATPAPTATPAPGSTPGAPPAGRPGAPPPGVRPGSPPAAGSPPAPGATPAPTTTP 283
Query: 454 ADGG------GRSSPTRDPAPDAMAQMP 389
A GG GR P PAP A P
Sbjct: 284 APGGTATPPSGRPGPASTPAPGAATPAP 311
Score = 43.1 bits (100), Expect = 0.005
Identities = 40/126 (31%), Positives = 47/126 (36%), Gaps = 3/126 (2%)
Frame = -2
Query: 751 PAACSRRWRARSAPPPPGTGSTAPDPTPRSDPRPCCGTSSPCT---SPPHPAASPRSWQP 581
P A AR A PPP A P P + P P P PP PAA P P
Sbjct: 56 PGAAPPAAPARPAAPPPA----AAPPHPPAAPPPAAAPPRPAAPPPPPPPPAARPAPPPP 111
Query: 580 PAAPAGLRAASRRTFRRTAARPGH*PAVATERRRATWP*PRAADGGGRSSPTRDPAPDAM 401
P PA + +P PA A ++ T P P A R +PT P A
Sbjct: 112 PPPPAAPK------------QPSPPPAAAPQQHAPTPPPP--APPAARPAPTPPAPPPAA 157
Query: 400 AQMPRH 383
A P+H
Sbjct: 158 A--PQH 161
Score = 33.1 bits (74), Expect = 5.0
Identities = 32/109 (29%), Positives = 38/109 (34%), Gaps = 3/109 (2%)
Frame = -2
Query: 637 SSPCTSPPHPAASPRSWQPPAAPAGLRAASRRTFRRTAARPGH*PAV---ATERRRATWP 467
+ P P P P PPAAPA R AA P H PA A R P
Sbjct: 42 TGPDGKPKQPPKGPPGAAPPAAPA------RPAAPPPAAAPPHPPAAPPPAAAPPRPAAP 95
Query: 466 *PRAADGGGRSSPTRDPAPDAMAQMPRHLCCCVDRCSQCSGSPNSSAPP 320
P R +P P P A + P + Q + +P APP
Sbjct: 96 PPPPPPPAARPAPPPPPPPPAAPKQPSPPPAAAPQ--QHAPTPPPPAPP 142
Score = 33.1 bits (74), Expect = 5.0
Identities = 43/156 (27%), Positives = 51/156 (32%), Gaps = 1/156 (0%)
Frame = -2
Query: 760 APGPAACSRRWRARSAPPPPG-TGSTAPDPTPRSDPRPCCGTSSPCTSPPHPAASPRSWQ 584
AP P A +PP PG T + P P P G P ++P AA+P
Sbjct: 254 APPPGVRPGSPPAAGSPPAPGATPAPTTTPAPGGTATPPSGRPGPASTPAPGAATPAPTA 313
Query: 583 PPAAPAGLRAASRRTFRRTAARPGH*PAVATERRRATWP*PRAADGGGRSSPTRDPAPDA 404
PA L R A P P T A AA P R PA A
Sbjct: 314 TPAPGGALTPPP----GRPGAGPTPGPQGGTPPAGAPAAGTPAAPPQAGGLPAR-PAAPA 368
Query: 403 MAQMPRHLCCCVDRCSQCSGSPNSSAPPRLSVHAGP 296
A P S GS ++ PP + A P
Sbjct: 369 GAAAP----------STVPGSAAATPPPNRAQFAPP 394
>gb|AAK95470.1| LF3 [cercopithicine herpesvirus 15]
Length = 890
Score = 50.1 bits (118), Expect = 4e-05
Identities = 42/131 (32%), Positives = 53/131 (40%), Gaps = 6/131 (4%)
Frame = -2
Query: 760 APGPAA-CSRRWRARSAPPPPGTGS-----TAPDPTPRSDPRPCCGTSSPCTSPPHPAAS 599
APGP++ +R R R PPP GS P P+ R+ R P PP +
Sbjct: 29 APGPSSRTGQRTRQRPGHPPPERGSGPRGTRPPAPSSRTGQRT---RQRPGHPPPERGSG 85
Query: 598 PRSWQPPAAPAGLRAASRRTFRRTAARPGH*PAVATERRRATWP*PRAADGGGRSSPTRD 419
PR +PP A S RT +RT RPGH P R T P ++ G R+
Sbjct: 86 PRGTRPP-------APSSRTGQRTRQRPGHPPPERGSGPRGTRPPAPSSRTGQRTRQRPG 138
Query: 418 PAPDAMAQMPR 386
P PR
Sbjct: 139 HPPPERGSGPR 149
Score = 46.2 bits (108), Expect = 6e-04
Identities = 42/130 (32%), Positives = 50/130 (38%), Gaps = 8/130 (6%)
Frame = -2
Query: 751 PAACSR---RWRARSAPPPPGTGS-----TAPDPTPRSDPRPCCGTSSPCTSPPHPAASP 596
PA SR R R R PPP GS P P+ R+ R P PP + P
Sbjct: 278 PAPSSRTGQRTRQRPGHPPPERGSGPRGTRPPAPSSRTGQRT---RQRPGHPPPERGSGP 334
Query: 595 RSWQPPAAPAGLRAASRRTFRRTAARPGH*PAVATERRRATWP*PRAADGGGRSSPTRDP 416
R +PP A S RT +RT RPGH P R T P ++ G R+
Sbjct: 335 RGTRPP-------APSSRTGQRTRQRPGHPPPERGSGPRGTRPPAPSSRTGQRTRQRPGH 387
Query: 415 APDAMAQMPR 386
P PR
Sbjct: 388 PPPERGSGPR 397
Score = 46.2 bits (108), Expect = 6e-04
Identities = 42/130 (32%), Positives = 50/130 (38%), Gaps = 8/130 (6%)
Frame = -2
Query: 751 PAACSR---RWRARSAPPPPGTGS-----TAPDPTPRSDPRPCCGTSSPCTSPPHPAASP 596
PA SR R R R PPP GS P P+ R+ R P PP + P
Sbjct: 402 PAPSSRTGQRTRQRPGHPPPERGSGPRGTRPPAPSSRTGQRT---RQRPGHPPPERGSGP 458
Query: 595 RSWQPPAAPAGLRAASRRTFRRTAARPGH*PAVATERRRATWP*PRAADGGGRSSPTRDP 416
R +PP A S RT +RT RPGH P R T P ++ G R+
Sbjct: 459 RGTRPP-------APSSRTGQRTRQRPGHPPPERGSGPRGTRPPAPSSRTGQRTRQRPGH 511
Query: 415 APDAMAQMPR 386
P PR
Sbjct: 512 PPPERGSGPR 521
Score = 46.2 bits (108), Expect = 6e-04
Identities = 42/130 (32%), Positives = 50/130 (38%), Gaps = 8/130 (6%)
Frame = -2
Query: 751 PAACSR---RWRARSAPPPPGTGS-----TAPDPTPRSDPRPCCGTSSPCTSPPHPAASP 596
PA SR R R R PPP GS P P+ R+ R P PP + P
Sbjct: 216 PAPSSRTGQRTRQRPGHPPPERGSGPRGTRPPAPSSRTGQRT---RQRPGHPPPERGSGP 272
Query: 595 RSWQPPAAPAGLRAASRRTFRRTAARPGH*PAVATERRRATWP*PRAADGGGRSSPTRDP 416
R +PP A S RT +RT RPGH P R T P ++ G R+
Sbjct: 273 RGTRPP-------APSSRTGQRTRQRPGHPPPERGSGPRGTRPPAPSSRTGQRTRQRPGH 325
Query: 415 APDAMAQMPR 386
P PR
Sbjct: 326 PPPERGSGPR 335
Score = 46.2 bits (108), Expect = 6e-04
Identities = 42/130 (32%), Positives = 50/130 (38%), Gaps = 8/130 (6%)
Frame = -2
Query: 751 PAACSR---RWRARSAPPPPGTGS-----TAPDPTPRSDPRPCCGTSSPCTSPPHPAASP 596
PA SR R R R PPP GS P P+ R+ R P PP + P
Sbjct: 619 PAPSSRTGQRTRQRPGHPPPERGSGPRGTRPPAPSSRTGQRT---RQRPGHPPPERGSGP 675
Query: 595 RSWQPPAAPAGLRAASRRTFRRTAARPGH*PAVATERRRATWP*PRAADGGGRSSPTRDP 416
R +PP A S RT +RT RPGH P R T P ++ G R+
Sbjct: 676 RGTRPP-------APSSRTGQRTRQRPGHPPPERGSGPRGTRPPAPSSRTGQRTRQRPGH 728
Query: 415 APDAMAQMPR 386
P PR
Sbjct: 729 PPPERGSGPR 738
Score = 46.2 bits (108), Expect = 6e-04
Identities = 42/130 (32%), Positives = 50/130 (38%), Gaps = 8/130 (6%)
Frame = -2
Query: 751 PAACSR---RWRARSAPPPPGTGS-----TAPDPTPRSDPRPCCGTSSPCTSPPHPAASP 596
PA SR R R R PPP GS P P+ R+ R P PP + P
Sbjct: 123 PAPSSRTGQRTRQRPGHPPPERGSGPRGTRPPAPSSRTGQRT---RQRPGHPPPERGSGP 179
Query: 595 RSWQPPAAPAGLRAASRRTFRRTAARPGH*PAVATERRRATWP*PRAADGGGRSSPTRDP 416
R +PP A S RT +RT RPGH P R T P ++ G R+
Sbjct: 180 RGTRPP-------APSSRTGQRTRQRPGHPPPERGSGPRGTRPPAPSSRTGQRTRQRPGH 232
Query: 415 APDAMAQMPR 386
P PR
Sbjct: 233 PPPERGSGPR 242
Score = 46.2 bits (108), Expect = 6e-04
Identities = 42/130 (32%), Positives = 50/130 (38%), Gaps = 8/130 (6%)
Frame = -2
Query: 751 PAACSR---RWRARSAPPPPGTGS-----TAPDPTPRSDPRPCCGTSSPCTSPPHPAASP 596
PA SR R R R PPP GS P P+ R+ R P PP + P
Sbjct: 185 PAPSSRTGQRTRQRPGHPPPERGSGPRGTRPPAPSSRTGQRT---RQRPGHPPPERGSGP 241
Query: 595 RSWQPPAAPAGLRAASRRTFRRTAARPGH*PAVATERRRATWP*PRAADGGGRSSPTRDP 416
R +PP A S RT +RT RPGH P R T P ++ G R+
Sbjct: 242 RGTRPP-------APSSRTGQRTRQRPGHPPPERGSGPRGTRPPAPSSRTGQRTRQRPGH 294
Query: 415 APDAMAQMPR 386
P PR
Sbjct: 295 PPPERGSGPR 304
Score = 46.2 bits (108), Expect = 6e-04
Identities = 42/130 (32%), Positives = 50/130 (38%), Gaps = 8/130 (6%)
Frame = -2
Query: 751 PAACSR---RWRARSAPPPPGTGS-----TAPDPTPRSDPRPCCGTSSPCTSPPHPAASP 596
PA SR R R R PPP GS P P+ R+ R P PP + P
Sbjct: 433 PAPSSRTGQRTRQRPGHPPPERGSGPRGTRPPAPSSRTGQRT---RQRPGHPPPERGSGP 489
Query: 595 RSWQPPAAPAGLRAASRRTFRRTAARPGH*PAVATERRRATWP*PRAADGGGRSSPTRDP 416
R +PP A S RT +RT RPGH P R T P ++ G R+
Sbjct: 490 RGTRPP-------APSSRTGQRTRQRPGHPPPERGSGPRGTRPPAPSSRTGQRTRQRPGH 542
Query: 415 APDAMAQMPR 386
P PR
Sbjct: 543 PPPERGSGPR 552
Score = 46.2 bits (108), Expect = 6e-04
Identities = 42/130 (32%), Positives = 50/130 (38%), Gaps = 8/130 (6%)
Frame = -2
Query: 751 PAACSR---RWRARSAPPPPGTGS-----TAPDPTPRSDPRPCCGTSSPCTSPPHPAASP 596
PA SR R R R PPP GS P P+ R+ R P PP + P
Sbjct: 495 PAPSSRTGQRTRQRPGHPPPERGSGPRGTRPPAPSSRTGQRT---RQRPGHPPPERGSGP 551
Query: 595 RSWQPPAAPAGLRAASRRTFRRTAARPGH*PAVATERRRATWP*PRAADGGGRSSPTRDP 416
R +PP A S RT +RT RPGH P R T P ++ G R+
Sbjct: 552 RGTRPP-------APSSRTGQRTRQRPGHPPPERGSGPRGTRPPAPSSRTGQRTRQRPGH 604
Query: 415 APDAMAQMPR 386
P PR
Sbjct: 605 PPPERGSGPR 614
Score = 46.2 bits (108), Expect = 6e-04
Identities = 42/130 (32%), Positives = 50/130 (38%), Gaps = 8/130 (6%)
Frame = -2
Query: 751 PAACSR---RWRARSAPPPPGTGS-----TAPDPTPRSDPRPCCGTSSPCTSPPHPAASP 596
PA SR R R R PPP GS P P+ R+ R P PP + P
Sbjct: 557 PAPSSRTGQRTRQRPGHPPPERGSGPRGTRPPAPSSRTGQRT---RQRPGHPPPERGSGP 613
Query: 595 RSWQPPAAPAGLRAASRRTFRRTAARPGH*PAVATERRRATWP*PRAADGGGRSSPTRDP 416
R +PP A S RT +RT RPGH P R T P ++ G R+
Sbjct: 614 RGTRPP-------APSSRTGQRTRQRPGHPPPERGSGPRGTRPPAPSSRTGQRTRQRPGH 666
Query: 415 APDAMAQMPR 386
P PR
Sbjct: 667 PPPERGSGPR 676
Score = 46.2 bits (108), Expect = 6e-04
Identities = 42/130 (32%), Positives = 50/130 (38%), Gaps = 8/130 (6%)
Frame = -2
Query: 751 PAACSR---RWRARSAPPPPGTGS-----TAPDPTPRSDPRPCCGTSSPCTSPPHPAASP 596
PA SR R R R PPP GS P P+ R+ R P PP + P
Sbjct: 61 PAPSSRTGQRTRQRPGHPPPERGSGPRGTRPPAPSSRTGQRT---RQRPGHPPPERGSGP 117
Query: 595 RSWQPPAAPAGLRAASRRTFRRTAARPGH*PAVATERRRATWP*PRAADGGGRSSPTRDP 416
R +PP A S RT +RT RPGH P R T P ++ G R+
Sbjct: 118 RGTRPP-------APSSRTGQRTRQRPGHPPPERGSGPRGTRPPAPSSRTGQRTRQRPGH 170
Query: 415 APDAMAQMPR 386
P PR
Sbjct: 171 PPPERGSGPR 180
Score = 46.2 bits (108), Expect = 6e-04
Identities = 42/130 (32%), Positives = 50/130 (38%), Gaps = 8/130 (6%)
Frame = -2
Query: 751 PAACSR---RWRARSAPPPPGTGS-----TAPDPTPRSDPRPCCGTSSPCTSPPHPAASP 596
PA SR R R R PPP GS P P+ R+ R P PP + P
Sbjct: 681 PAPSSRTGQRTRQRPGHPPPERGSGPRGTRPPAPSSRTGQRT---RQRPGHPPPERGSGP 737
Query: 595 RSWQPPAAPAGLRAASRRTFRRTAARPGH*PAVATERRRATWP*PRAADGGGRSSPTRDP 416
R +PP A S RT +RT RPGH P R T P ++ G R+
Sbjct: 738 RGTRPP-------APSSRTGQRTRQRPGHPPPERGSGPRGTRPPAPSSRTGQRTRQRPGH 790
Query: 415 APDAMAQMPR 386
P PR
Sbjct: 791 PPPERGSGPR 800
Score = 46.2 bits (108), Expect = 6e-04
Identities = 42/130 (32%), Positives = 50/130 (38%), Gaps = 8/130 (6%)
Frame = -2
Query: 751 PAACSR---RWRARSAPPPPGTGS-----TAPDPTPRSDPRPCCGTSSPCTSPPHPAASP 596
PA SR R R R PPP GS P P+ R+ R P PP + P
Sbjct: 340 PAPSSRTGQRTRQRPGHPPPERGSGPRGTRPPAPSSRTGQRT---RQRPGHPPPERGSGP 396
Query: 595 RSWQPPAAPAGLRAASRRTFRRTAARPGH*PAVATERRRATWP*PRAADGGGRSSPTRDP 416
R +PP A S RT +RT RPGH P R T P ++ G R+
Sbjct: 397 RGTRPP-------APSSRTGQRTRQRPGHPPPERGSGPRGTRPPAPSSRTGQRTRQRPGH 449
Query: 415 APDAMAQMPR 386
P PR
Sbjct: 450 PPPERGSGPR 459
Score = 45.1 bits (105), Expect = 0.001
Identities = 41/127 (32%), Positives = 49/127 (38%), Gaps = 8/127 (6%)
Frame = -2
Query: 751 PAACSR---RWRARSAPPPPGTGS-----TAPDPTPRSDPRPCCGTSSPCTSPPHPAASP 596
PA SR R R R PPP GS P P+ R+ R P PP + P
Sbjct: 743 PAPSSRTGQRTRQRPGHPPPERGSGPRGTRPPAPSSRTGQRT---RQRPGHPPPERGSGP 799
Query: 595 RSWQPPAAPAGLRAASRRTFRRTAARPGH*PAVATERRRATWP*PRAADGGGRSSPTRDP 416
R +PP A S RT +RT RPGH P R T P ++ G R+
Sbjct: 800 RGTRPP-------APSSRTGQRTRQRPGHPPPERGSGPRGTRPPAPSSRTGQRTRQRPGH 852
Query: 415 APDAMAQ 395
P Q
Sbjct: 853 PPPEQTQ 859
>dbj|BAC87637.1| unnamed protein product [Homo sapiens]
Length = 286
Score = 49.7 bits (117), Expect = 5e-05
Identities = 56/169 (33%), Positives = 71/169 (41%), Gaps = 13/169 (7%)
Frame = -2
Query: 751 PAACSRRWRARSAPP-PPGTGSTAPDPTPRSDPRPCCGTSSPCTSPPH-------PAASP 596
P A R R++P P T S P PR+ PR +SP +PP P ASP
Sbjct: 122 PRASPTRTPPRASPRRTPSTASPTRTP-PRASPRRTPPRASPTRTPPRASPKRTPPRASP 180
Query: 595 RSWQPPAAPAGLRAASRRTFRRT--AARPGH*PAVATERRRATWP*PRAADGGGRSSPTR 422
R P A+P RA R + +RT A P P A+ R T P A R+SPTR
Sbjct: 181 RRTPPRASPT--RAPPRASPKRTPPTASPTRTPPRASPTR--TPPTESPARTPPRASPTR 236
Query: 421 DPAPDAMAQMPRHLCCCVDRCSQCSGSPNSS---APPRLSVHAGPCSVS 284
P ++ A+ P R S P +S PPR S P + S
Sbjct: 237 TPPTESPARTP-------SRASTRRTPPRASPTRTPPRASPKRTPPTAS 278
Score = 43.9 bits (102), Expect = 0.003
Identities = 48/166 (28%), Positives = 63/166 (37%), Gaps = 3/166 (1%)
Frame = -2
Query: 751 PAACSRRWRARSAPPPPGTGSTAPDPTPRSDPRPCCGTSSPCTSPPHPAASPRSWQPPAA 572
P A RR R++ P T + P + P T+SP +P P SP P A+
Sbjct: 59 PRASPRRTPPRASLTRPPTRAPPTRMPPTAPPTRTPPTASPARTP--PTESPARTPPTAS 116
Query: 571 PAGLRAASRRTFRRTAARPGH*PAVATERRRATWP*PRAADGGGRSSPTRDPAPDAMAQM 392
PA + T A P P+ A+ R PR R+SPTR P + +
Sbjct: 117 PARTPPRASPTRTPPRASPRRTPSTASPTRTPPRASPRRTP--PRASPTRTPPRASPKRT 174
Query: 391 PRHLCCCVDRCSQCSGSPNSS---APPRLSVHAGPCSVS*PEKVPR 263
P R S P +S APPR S P + S PR
Sbjct: 175 P-------PRASPRRTPPRASPTRAPPRASPKRTPPTASPTRTPPR 213
Score = 42.0 bits (97), Expect = 0.011
Identities = 39/130 (30%), Positives = 54/130 (41%), Gaps = 3/130 (2%)
Frame = -2
Query: 763 TAPGPAACSRRWRARSAP---PPPGTGSTAPDPTPRSDPRPCCGTSSPCTSPPHPAASPR 593
T P A +R R++P PP + + AP PR+ P+ T+SP +PP ASP
Sbjct: 163 TRTPPRASPKRTPPRASPRRTPPRASPTRAP---PRASPKRTPPTASPTRTPPR--ASPT 217
Query: 592 SWQPPAAPAGLRAASRRTFRRTAARPGH*PAVATERRRATWP*PRAADGGGRSSPTRDPA 413
P +PA + T P P+ A+ RR T P R+SP R P
Sbjct: 218 RTPPTESPARTPPRASPTRTPPTESPARTPSRASTRR--TPPRASPTRTPPRASPKRTPP 275
Query: 412 PDAMAQMPRH 383
+ RH
Sbjct: 276 TASPTSCIRH 285
Score = 40.0 bits (92), Expect = 0.041
Identities = 46/173 (26%), Positives = 54/173 (30%), Gaps = 6/173 (3%)
Frame = -2
Query: 763 TAPGPAACSRRWRARSAPPPPGTGSTAPDPTPRSDPRPCCGTSSPCTSPP---HPAASPR 593
T P R PP T P +PR P T P +PP P A P
Sbjct: 32 TRASPTRMPPRASPTRTPPRASPRRTPPRASPRRTPPRASLTRPPTRAPPTRMPPTAPPT 91
Query: 592 SWQPPAAPAGLRAASRRTFRRTAARPGH*PAVATERRRATWP*PRAADGGGRSSPTRDPA 413
P A+PA A P P A+ R PR +SPTR P
Sbjct: 92 RTPPTASPARTPPTESPARTPPTASPARTPPRASPTRTPPRASPRRTP--STASPTRTPP 149
Query: 412 PDAMAQMPRHLCCCVDRCSQCSGSPNSS---APPRLSVHAGPCSVS*PEKVPR 263
+ + P R S P +S PPR S P S PR
Sbjct: 150 RASPRRTP-------PRASPTRTPPRASPKRTPPRASPRRTPPRASPTRAPPR 195
>gb|AAC82365.1| unknown [Myxococcus xanthus]
Length = 542
Score = 48.9 bits (115), Expect = 9e-05
Identities = 53/178 (29%), Positives = 67/178 (36%), Gaps = 22/178 (12%)
Frame = -2
Query: 757 PGPAACSRRWRARSAPPPPGTGSTAPDPTPRSDPRPCCGTSSPCTSPP---HPAASPRSW 587
P P S R + PPP T S P P++ P PC + P + PP H + RS+
Sbjct: 21 PPPCLLSERTPPGARPPPTETASY---PPPQAVPGPCAPRAPPRSPPPRRRHRGSRHRSF 77
Query: 586 QPPAAPAGLR--AASRRTFRRTAARPGH--------------*PAVATERRRATWP*PRA 455
+P A R A R RR A P P A R RA P
Sbjct: 78 RPTCARRSGRRCPAPSRHARRNPAGPSRRCGPPRKSTPTRCCTPCPAPPRCRARPSAP-- 135
Query: 454 ADGGGRSSPTRDPAPDAMAQMPRHLCCCVDRCSQCSG-SPNSS--APPRLSVHAGPCS 290
A GR+ PT P+ A CC RC G +P+ + +PP S P S
Sbjct: 136 APSAGRTCPTAGPSSCASG------CCPTGRCGSAPGPTPHGAEPSPPSQSPSPAPAS 187
Score = 48.5 bits (114), Expect = 1e-04
Identities = 50/159 (31%), Positives = 59/159 (36%), Gaps = 10/159 (6%)
Frame = -2
Query: 766 CTAPGPAACSRRWRARSAPPPPGTGSTAPDPTPRSDPRPCCGTSSPCTSPPHPAASPRSW 587
C P PA R RAR + P P G T P P S CC T C S P P
Sbjct: 118 CCTPCPAP--PRCRARPSAPAPSAGRTCPTAGPSSCASGCCPTGR-CGSAPGPTPHGAEP 174
Query: 586 QPPAAPAGLRAASRRTFRRTAARPGH*PAVATERRRATWP*PRA----ADGGGRSSP--- 428
PP+ AS RRT RP + A A P PR G R++P
Sbjct: 175 SPPSQSPSPAPASSGGRRRTHPRPAR-ASAAGATAPACLPPPRCCGRPGTGCARTAPPST 233
Query: 427 --TRDPAPDAMAQMPRHLCCCVDRCSQCSGSPNSS-APP 320
+ P P + PR SGSP ++ APP
Sbjct: 234 SASHPPPPRSPGTPPR-----------ASGSPAAAPAPP 261
Score = 44.7 bits (104), Expect = 0.002
Identities = 63/230 (27%), Positives = 83/230 (35%), Gaps = 15/230 (6%)
Frame = -2
Query: 742 CSRRWRARSAPPP-------PGTGSTAPDPTPRSDPRPCCGTSSPCTSPPH-------PA 605
C+RR R P P P S P +S P CC +PC +PP PA
Sbjct: 81 CARR-SGRRCPAPSRHARRNPAGPSRRCGPPRKSTPTRCC---TPCPAPPRCRARPSAPA 136
Query: 604 ASPRSWQPPAAPAGLRAASRRTFRRTAARPGH*PAVATERRRATWP*PRAADGGGRSSPT 425
S P A P+ + T R +A PG P A + P P A GGR
Sbjct: 137 PSAGRTCPTAGPSSCASGCCPTGRCGSA-PGPTPHGAEPSPPSQSPSPAPASSGGRRRTH 195
Query: 424 RDPAPDAMAQMPRHLCCCVDRCSQCSGSPNS-SAPPRLSVHAGPCSVS*PEKVPRGMMST 248
PA + A C RC G+ + +APP S P S P PR S
Sbjct: 196 PRPARASAAGATAPACLPPPRCCGRPGTGCARTAPPSTSASHPPPPRS-PGTPPRASGSP 254
Query: 247 VR*SMVAQLDAGRASPPALCGCLADLAADSMKSPMIALKA*GTHWLHVIS 98
+ A R PP + A ++ P I+ WLH+++
Sbjct: 255 AA-APAPPSPACRPPPPGTTPAPRNAALPAL--PCISPSRQRATWLHLLA 301
Score = 35.0 bits (79), Expect = 1.3
Identities = 33/104 (31%), Positives = 42/104 (39%), Gaps = 5/104 (4%)
Frame = -2
Query: 766 CTAPGPAACSRRW---RARSAPPPPGTGSTAP--DPTPRSDPRPCCGTSSPCTSPPHPAA 602
C PG C+R + S PPPP + T P +P + P P SP PP P
Sbjct: 218 CGRPG-TGCARTAPPSTSASHPPPPRSPGTPPRASGSPAAAPAP----PSPACRPPPPGT 272
Query: 601 SPRSWQPPAAPAGLRAASRRTFRRTAARPGH*PAVATERRRATW 470
+P AP R AA P P ++ R+RATW
Sbjct: 273 TP-------AP------------RNAALPAL-PCISPSRQRATW 296
Score = 33.9 bits (76), Expect = 2.9
Identities = 25/76 (32%), Positives = 28/76 (35%), Gaps = 7/76 (9%)
Frame = -2
Query: 718 SAPPPPGTGSTAPDPTPRSDPRPCCGTSSPCTSPP-------HPAASPRSWQPPAAPAGL 560
+AP PP P P PR + PC SP H A P+ Q GL
Sbjct: 256 AAPAPPSPACRPPPPGTTPAPRNAALPALPCISPSRQRATWLHLLAQPQDGQATFKGHGL 315
Query: 559 RAASRRTFRRTAARPG 512
RA R RR R G
Sbjct: 316 RARVRTGRRRHLHRLG 331
Score = 33.1 bits (74), Expect = 5.0
Identities = 29/98 (29%), Positives = 34/98 (34%), Gaps = 12/98 (12%)
Frame = +2
Query: 341 AAGALGAAINTATQMTGHLGHRVRSRVPSWTGAASPV------------GSSRLWPCRPS 484
AAGA A + G G P T A+ P GS P PS
Sbjct: 203 AAGATAPACLPPPRCCGRPGTGCARTAPPSTSASHPPPPRSPGTPPRASGSPAAAPAPPS 262
Query: 485 PLCRYRWSMTRPGSSPSKRTAGSCAKSCWGSRRLPRTW 598
P CR PG++P+ R A A C R TW
Sbjct: 263 PACR----PPPPGTTPAPRNAALPALPCISPSRQRATW 296
>ref|ZP_00058982.1| COG0532: Translation initiation factor 2 (IF-2; GTPase)
[Thermobifida fusca]
Length = 955
Score = 48.9 bits (115), Expect = 9e-05
Identities = 43/146 (29%), Positives = 51/146 (34%), Gaps = 4/146 (2%)
Frame = -2
Query: 721 RSAPPPPGTG-STAPDPTPRSDPRPCCGTSSPCTSPPHPAASPRSWQPPAAPAGLRAASR 545
R A P PG G P P P+ PRP P A QP A R S
Sbjct: 94 RPAVPKPGPGLKPGPRPVPKPGPRP--------GPRPEGGAGKAGQQPSGAQGPARPESG 145
Query: 544 RTFR---RTAARPGH*PAVATERRRATWP*PRAADGGGRSSPTRDPAPDAMAQMPRHLCC 374
+T R + RPG+ P +T T P PR GG +P P P PR
Sbjct: 146 KTPRPVPKPGPRPGNNPFSSTASGMGTRPTPRPPASGGTGAPRPGPRPHPGMMPPR---- 201
Query: 373 CVDRCSQCSGSPNSSAPPRLSVHAGP 296
+ G P AP + GP
Sbjct: 202 ---PGASAGGPPRPQAPRPQAPRPGP 224
