Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC000230A_C01 KCC000230A_c01
(572 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|O01725|RLA2_BRAFL 60S ACIDIC RIBOSOMAL PROTEIN P2 gi|2113805|... 144 7e-34
gb|AAN52372.1| ribosomal protein P2 [Branchiostoma belcheri] 140 1e-32
ref|XP_344444.1| similar to 60S ACIDIC RIBOSOMAL PROTEIN P2 [Rat... 133 2e-30
ref|XP_215116.2| similar to 60S ACIDIC RIBOSOMAL PROTEIN P2 [Rat... 132 4e-30
gb|AAK95125.1|AF401553_1 ribosomal protein P2 [Ictalurus punctatus] 130 1e-29
>sp|O01725|RLA2_BRAFL 60S ACIDIC RIBOSOMAL PROTEIN P2 gi|2113805|emb|CAB05855.1|
ribosomal protein P2 [Branchiostoma floridae]
Length = 116
Score = 144 bits (364), Expect = 7e-34
Identities = 77/116 (66%), Positives = 91/116 (78%), Gaps = 7/116 (6%)
Frame = +2
Query: 38 MRVVSAYLLAVLGGKANPTADDVNKILSSVGVEAEAEKVNKLISELEGKNLAEVIAAGRS 217
MR V+AYLLAVLGG ANP+A D+ KIL SVG++AE E++NK+I EL+GK++ EV+AAGR
Sbjct: 1 MRYVAAYLLAVLGGNANPSAGDIKKILGSVGIDAEDERLNKVIGELKGKDIEEVMAAGRG 60
Query: 218 KLASVPSGGAVAAAPSGGAAPAAGGAAAP----KKEEKKEPSEEE---DMGFSLFD 364
KL+S+PSGG VAAA GG A A GG AAP KKEEKKE SEEE DMGF LFD
Sbjct: 61 KLSSMPSGGGVAAAAGGGGAAAGGGGAAPAAEEKKEEKKEESEEESDDDMGFGLFD 116
>gb|AAN52372.1| ribosomal protein P2 [Branchiostoma belcheri]
Length = 115
Score = 140 bits (353), Expect = 1e-32
Identities = 77/116 (66%), Positives = 91/116 (78%), Gaps = 7/116 (6%)
Frame = +2
Query: 38 MRVVSAYLLAVLGGKANPTADDVNKILSSVGVEAEAEKVNKLISELEGKNLAEVIAAGRS 217
MR V+AYLLAVLGG ANP+A D+ KIL SVG++A+ E++NK+ISEL GK++ EV+AAGR
Sbjct: 1 MRYVAAYLLAVLGGNANPSAGDIKKILGSVGIDADDERLNKVISELNGKDIEEVMAAGRG 60
Query: 218 KLASVPSGGAVAAAPSGGAAPAAGGAAAP----KKEEKKEPSEE---EDMGFSLFD 364
KL+S+PSGG VA A GG A AAGG AAP KKEEKKE SEE EDMGF LFD
Sbjct: 61 KLSSMPSGGGVAVAAGGGGA-AAGGGAAPAAEEKKEEKKEESEEESDEDMGFGLFD 115
>ref|XP_344444.1| similar to 60S ACIDIC RIBOSOMAL PROTEIN P2 [Rattus norvegicus]
Length = 115
Score = 133 bits (334), Expect = 2e-30
Identities = 74/115 (64%), Positives = 89/115 (77%), Gaps = 6/115 (5%)
Frame = +2
Query: 38 MRVVSAYLLAVLGGKANPTADDVNKILSSVGVEAEAEKVNKLISELEGKNLAEVIAAGRS 217
MR V++YLLA LGG +NP+A D+ KIL SVG+EA+ E++NK+ISEL GKN+ +VIA G
Sbjct: 1 MRYVASYLLAALGGNSNPSAKDIKKILDSVGIEADDERLNKVISELNGKNIEDVIAQGVG 60
Query: 218 KLASVPSGGAVA-AAPSGGAAPAAG---GAAAPKKEEKKEPSEE--EDMGFSLFD 364
KLASVP+GGAVA +A G AAPAAG AA KK+EKKE SEE EDMGF LFD
Sbjct: 61 KLASVPAGGAVAVSAAPGSAAPAAGSAPAAAEEKKDEKKEESEESDEDMGFGLFD 115
>ref|XP_215116.2| similar to 60S ACIDIC RIBOSOMAL PROTEIN P2 [Rattus norvegicus]
gi|34865171|ref|XP_347185.1| similar to 60S ACIDIC
RIBOSOMAL PROTEIN P2 [Rattus norvegicus]
gi|133063|sp|P02401|RLA2_RAT 60S ACIDIC RIBOSOMAL
PROTEIN P2 gi|71153|pir||R6RTP2 acidic ribosomal protein
P2, cytosolic [validated] - rat gi|57676|emb|CAA38953.1|
ribosomal protein P2 [Rattus rattus]
gi|57712|emb|CAA33201.1| unnamed protein product [Rattus
rattus] gi|228178|prf||1718187C ribosomal protein P2
Length = 115
Score = 132 bits (331), Expect = 4e-30
Identities = 73/115 (63%), Positives = 89/115 (76%), Gaps = 6/115 (5%)
Frame = +2
Query: 38 MRVVSAYLLAVLGGKANPTADDVNKILSSVGVEAEAEKVNKLISELEGKNLAEVIAAGRS 217
MR V++YLLA LGG +NP+A D+ KIL SVG+EA+ E++NK+ISEL GKN+ +VIA G
Sbjct: 1 MRYVASYLLAALGGNSNPSAKDIKKILDSVGIEADDERLNKVISELNGKNIEDVIAQGVG 60
Query: 218 KLASVPSGGAVA-AAPSGGAAPAAG---GAAAPKKEEKKEPSEE--EDMGFSLFD 364
KLASVP+GGAVA +A G AAPAAG AA KK+EKKE SEE +DMGF LFD
Sbjct: 61 KLASVPAGGAVAVSAAPGSAAPAAGSAPAAAEEKKDEKKEESEESDDDMGFGLFD 115
>gb|AAK95125.1|AF401553_1 ribosomal protein P2 [Ictalurus punctatus]
Length = 115
Score = 130 bits (327), Expect = 1e-29
Identities = 75/115 (65%), Positives = 88/115 (76%), Gaps = 6/115 (5%)
Frame = +2
Query: 38 MRVVSAYLLAVLGGKANPTADDVNKILSSVGVEAEAEKVNKLISELEGKNLAEVIAAGRS 217
MR V+AYLLAVLGG +P+A D+ IL SVG+EAE E++NK+ISEL GK++ EV+ AG +
Sbjct: 1 MRYVAAYLLAVLGGNTSPSAKDIKNILGSVGIEAEDERLNKVISELNGKDINEVMNAGLA 60
Query: 218 KLASVPSGGAV---AAAPSGGA-APAAGGAAAPKKEEKKEPSEE--EDMGFSLFD 364
KLASVP+GGAV AAAP GA A AA AA KKEEKKE SEE EDMGF LFD
Sbjct: 61 KLASVPAGGAVAVSAAAPGAGAPAAAAAPAAEEKKEEKKEESEESDEDMGFGLFD 115
