Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC000166A_C01 KCC000166A_c01
(998 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_177217.1| 60S ribosomal protein L27A (RPL27aC) [Arabidops... 175 5e-51
dbj|BAA96068.1| 60S ribosomal protein L27a [Panax ginseng] 177 8e-51
gb|AAM62795.1| 60S ribosomal protein L27A [Arabidopsis thaliana] 174 1e-50
gb|AAD13388.1| ribosomal protein L27a [Petunia x hybrida] 173 2e-50
ref|NP_000981.1| ribosomal protein L27a; 60S ribosomal protein L... 187 2e-50
>ref|NP_177217.1| 60S ribosomal protein L27A (RPL27aC) [Arabidopsis thaliana]
gi|1710530|sp|P49637|R27C_ARATH 60S ribosomal protein
L27a-3 gi|2129719|pir||S71256 ribosomal protein L27a,
cytosolic - Arabidopsis thaliana
gi|1107487|emb|CAA63025.1| 60S ribosomal protein L27a
[Arabidopsis thaliana]
gi|12324756|gb|AAG52338.1|AC011663_17 60S ribosomal
protein L27A; 82981-83421 [Arabidopsis thaliana]
gi|12325037|gb|AAG52464.1|AC010796_3 60S ribosomal
protein L27A; 71521-71081 [Arabidopsis thaliana]
gi|14517370|gb|AAK62576.1| At1g70600/F5A18_22
[Arabidopsis thaliana] gi|15081672|gb|AAK82491.1|
At1g70600/F5A18_22 [Arabidopsis thaliana]
gi|20147177|gb|AAM10305.1| At1g70600/F5A18_22
[Arabidopsis thaliana]
Length = 146
Score = 175 bits (444), Expect(2) = 5e-51
Identities = 82/125 (65%), Positives = 99/125 (78%), Gaps = 1/125 (0%)
Frame = +1
Query: 406 KHRKHPGGRGNAGGQHHHRIMMDKYHPGFFGKVGMRHFHYARNKYHCPIINLDKLWTLVG 585
KHRKHPGGRGNAGG HHHRI+ DKYHPG+FGKVGMR+FH RNK+ CPI+NLDKLW+LV
Sbjct: 24 KHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRYFHKLRNKFFCPIVNLDKLWSLVP 83
Query: 586 EEAREQAAKDKSSAAVIDVTKYGISKVLGKGQLPE-QPVVVKAKFFSSLAEKKIRAVGGD 762
E+ + ++ KD + +IDVT++G KVLGKG LPE +P VVKAK S AEKKI+ GG
Sbjct: 84 EDVKAKSTKD--NVPLIDVTQHGFFKVLGKGHLPENKPFVVKAKLISKTAEKKIKEAGGA 141
Query: 763 CILTA 777
+LTA
Sbjct: 142 VVLTA 146
Score = 49.3 bits (116), Expect(2) = 5e-51
Identities = 21/22 (95%), Positives = 22/22 (99%)
Frame = +3
Query: 336 MTTRFKKNRKKRGHVSAGHGRV 401
MTTRFKKNRKKRGHVSAGHGR+
Sbjct: 1 MTTRFKKNRKKRGHVSAGHGRI 22
>dbj|BAA96068.1| 60S ribosomal protein L27a [Panax ginseng]
Length = 146
Score = 177 bits (448), Expect(2) = 8e-51
Identities = 82/125 (65%), Positives = 101/125 (80%), Gaps = 1/125 (0%)
Frame = +1
Query: 406 KHRKHPGGRGNAGGQHHHRIMMDKYHPGFFGKVGMRHFHYARNKYHCPIINLDKLWTLVG 585
KHRKHPGGRGNAGG HHHRI+ DKYHPG+FGKVGMR+FH RNK++CP++N+DKLW+L+
Sbjct: 24 KHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRYFHRLRNKFYCPVVNIDKLWSLLP 83
Query: 586 EEAREQAAKDKSSAAVIDVTKYGISKVLGKGQLP-EQPVVVKAKFFSSLAEKKIRAVGGD 762
+EA+E+A D +A VIDVT++G KVLGKG LP P+VVKAK S AEKKI+ GG
Sbjct: 84 QEAKEKA--DAQNAPVIDVTQHGYFKVLGKGFLPSSHPIVVKAKLVSKTAEKKIKEAGGA 141
Query: 763 CILTA 777
+LTA
Sbjct: 142 VVLTA 146
Score = 47.0 bits (110), Expect(2) = 8e-51
Identities = 20/22 (90%), Positives = 21/22 (94%)
Frame = +3
Query: 336 MTTRFKKNRKKRGHVSAGHGRV 401
MTTRFKKN KKRGHVSAGHGR+
Sbjct: 1 MTTRFKKNXKKRGHVSAGHGRI 22
>gb|AAM62795.1| 60S ribosomal protein L27A [Arabidopsis thaliana]
Length = 146
Score = 174 bits (440), Expect(2) = 1e-50
Identities = 82/125 (65%), Positives = 98/125 (77%), Gaps = 1/125 (0%)
Frame = +1
Query: 406 KHRKHPGGRGNAGGQHHHRIMMDKYHPGFFGKVGMRHFHYARNKYHCPIINLDKLWTLVG 585
KHRKHPGGRGNAGG HHHRI+ DKYHPG+FGKVGMR+FH RNK+ CPI+NLDKLW+LV
Sbjct: 24 KHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRYFHKLRNKFFCPIVNLDKLWSLVP 83
Query: 586 EEAREQAAKDKSSAAVIDVTKYGISKVLGKGQLPE-QPVVVKAKFFSSLAEKKIRAVGGD 762
E+ + A K++ +IDVT++G KVLGKG LPE +P VVKAK S AEKKI+ GG
Sbjct: 84 EDVK--AKSTKNNVPLIDVTQHGFFKVLGKGHLPENKPFVVKAKLISKTAEKKIKEAGGA 141
Query: 763 CILTA 777
+LTA
Sbjct: 142 VVLTA 146
Score = 49.3 bits (116), Expect(2) = 1e-50
Identities = 21/22 (95%), Positives = 22/22 (99%)
Frame = +3
Query: 336 MTTRFKKNRKKRGHVSAGHGRV 401
MTTRFKKNRKKRGHVSAGHGR+
Sbjct: 1 MTTRFKKNRKKRGHVSAGHGRI 22
>gb|AAD13388.1| ribosomal protein L27a [Petunia x hybrida]
Length = 150
Score = 173 bits (439), Expect(2) = 2e-50
Identities = 82/127 (64%), Positives = 100/127 (78%), Gaps = 3/127 (2%)
Frame = +1
Query: 406 KHRKHPGGRGNAGGQHHHRIMMDKYHPGFFGKVGMRHFHYARNKYHCPIINLDKLWTLVG 585
KHRKHPGGRGNAGG HHHRI+ DKYHPG+FGKVGMR+FH RNK++CP +N+DKLW+LV
Sbjct: 24 KHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRYFHKLRNKFYCPTVNIDKLWSLVP 83
Query: 586 EEAREQAAKD--KSSAAVIDVTKYGISKVLGKGQLPE-QPVVVKAKFFSSLAEKKIRAVG 756
++ +++ A K +A +IDVT+YG KVLGKG LPE Q VVVKAK S AEKKI+ G
Sbjct: 84 QDVKDKVAAGGAKGTAPLIDVTQYGYFKVLGKGVLPENQAVVVKAKLVSKNAEKKIKEAG 143
Query: 757 GDCILTA 777
G +LTA
Sbjct: 144 GAVVLTA 150
Score = 49.3 bits (116), Expect(2) = 2e-50
Identities = 21/22 (95%), Positives = 22/22 (99%)
Frame = +3
Query: 336 MTTRFKKNRKKRGHVSAGHGRV 401
MTTRFKKNRKKRGHVSAGHGR+
Sbjct: 1 MTTRFKKNRKKRGHVSAGHGRI 22
>ref|NP_000981.1| ribosomal protein L27a; 60S ribosomal protein L27a [Homo sapiens]
gi|1173017|sp|P46776|RL2A_HUMAN 60S ribosomal protein
L27a gi|1362930|pir||S55914 ribosomal protein L27a -
human gi|550017|gb|AAA85656.1| ribosomal protein L27a
gi|4760602|dbj|BAA77361.1| ribosomal protein L27A [Homo
sapiens] gi|13529098|gb|AAH05326.1| Ribosomal protein
L27a [Homo sapiens] gi|1096940|prf||2113200C ribosomal
protein L27a
Length = 148
Score = 187 bits (476), Expect(2) = 2e-50
Identities = 86/125 (68%), Positives = 103/125 (81%), Gaps = 1/125 (0%)
Frame = +1
Query: 406 KHRKHPGGRGNAGGQHHHRIMMDKYHPGFFGKVGMRHFHYARNKYHCPIINLDKLWTLVG 585
KHRKHPGGRGNAGG HHHRI DKYHPG+FGKVGM+H+H RN+ CP +NLDKLWTLV
Sbjct: 24 KHRKHPGGRGNAGGLHHHRINFDKYHPGYFGKVGMKHYHLKRNQSFCPTVNLDKLWTLVS 83
Query: 586 EEAREQAAKDKSSAA-VIDVTKYGISKVLGKGQLPEQPVVVKAKFFSSLAEKKIRAVGGD 762
E+ R AAK+K+ AA +IDV + G KVLGKG+LP+QPV+VKAKFFS AE+KI++VGG
Sbjct: 84 EQTRVNAAKNKTGAAPIIDVVRSGYYKVLGKGKLPKQPVIVKAKFFSRRAEEKIKSVGGA 143
Query: 763 CILTA 777
C+L A
Sbjct: 144 CVLVA 148
Score = 34.7 bits (78), Expect(2) = 2e-50
Identities = 14/22 (63%), Positives = 17/22 (76%)
Frame = +3
Query: 336 MTTRFKKNRKKRGHVSAGHGRV 401
M +R +K RK RGHVS GHGR+
Sbjct: 1 MPSRLRKTRKLRGHVSHGHGRI 22
