KCC000160A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC000160A_C01 KCC000160A_c01
cgagacGTTGCTTACACTGTGGCAGTCCTCTCTGCCCAGTTTACCTCAATACCGAACAAT
GCAGCTCCTCAACCAGCGTCAGGCCCTGCGCCTGGGCCGCTCTTCTGCTAGCAAGAACCA
GCAGGTTGCTCCTCTGGCCTCTCGCCCTGCGTCTTCCTTGAGCGTCAGCGCCTCGAGCGT
CGCGCCGGCGCCTGCTTGCAGTGCTCCCGCGGGCGCAGGTCGCCGCGCTGTTGTCGTGCG
CGCTTCAGCTACCAAGGAGAAGGTGGAGGAGCTGACCATCCAGCCCGTGAAGAAGATCGC
GGGCACTGTGAAACTGCCCGGCTCGAAGTCTCTGTCGAACCGCATCCTGCTGCTGGCGGC
CCTTTCGGAGGGCACCACGCTAGTGAAGAACCTGCTGGACAGCGATGACATCCGCTACAT
GGTGGGCGCGCTGAAGGCGCTGAACGTCAAGCTTGAGGAGAACTGGGAGGCGGGCGAGAT
GGTGGTGCACGGCTGCGGCGGCCGCTTCGACAGCGCCGGCGCCGAGCTGTTCCTGGGCAA
CGCCGGCACGGCCATGCGCCCGCTCACGGCAGCGGTGGTGGCGGCCGGCCGCGGCAAGTT
CGTGCTGGACGGTGTTGCCCCGCATGCGCGAGCGGCCCATTGAGGACCTGGTGGACGGGC
TGGTGCAGCTGGGCGTGGACGCCAAGTGCACCATGGGCACTGGCTGCCCGCCCGTGGAGG
TCAACAGCAAGGGGCTGCCCACCGGCAAGGTGTACCTGTCCGGCAAGGTGTCCAGCCAGT
ACCTGACGGCGCTGCTCATGGCGGCGCCGCTGGCGGTGCCGGGCGGCGCGGGCGGCGACG
CTATCGAGATCATCATCAAGGACGAGCTGGTGTCGCAGCCGTATGTGGACATGACCGTCA
AGCTCATGGAGCGGTTCGGGGTGGTGGTGGAGCGGCTCAACGGCCTGCAGCACCTGCGGA
TCCCCGCCGGCCAGACGTACAAGACCCCTGGAGAGGCGTACGTGGAGGGCGACGCCTCCT
CTGCCTCCTACTTCCTGGCGGGCGCCACAATCACCGGCGGCACCGTCACCGTGGAGGGCT
GCGGCAGCGACAGCCTGCAGGGAGACGTGCGCTTCGCCGAGGTCATGGGTCTGCTGGGCG
CCAAGGTGGAGTGGTCGCCTTACTCCATCACCATCACCGGCCCCTCCGCCTTCGGCAAGC
CCATCACCGGCATCGACCACGACTGCAACGACATCCCGGACGCCGCCATGACACTGGCCG
TGGCCGCGCTGTTCGCCGACCGCCCCACCGCCATCCGCAACGTGTACAACTGGCGTGTGA
AGGAGACGGAGCGCATGGTGGCCATTGTGACGGAGCTGCGCAAGCTGGGCGCGGAGGTGG
AGGAGGGCCGCGACTACTGCATCGTCACGCCGCCTCCGGGTGGTGTCAAGGGCGTCAAGG
CCAACGTGGGCATCGACACCTACGACGACCACCGCATGGCCATGGCCTTCTCGCTGGTGG
CGGCCGCCGGCGTGCCCGTGGTCATCCGCGATCCCGGCTGCACGCGGAAGACCTTCCCCA
CCTACTTCAAGGTGTTCGAGAGCGTGGCGCAGCACTAGACGCAGCGTACCACTATTGCGA
GGCGGCGGTGGGGCTG


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC000160A_C01 KCC000160A_c01
         (1636 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

gb|AAL65913.1|AF440389_1 5-enolpyruvylshikimate-3-phosphate synt...   410  e-152
ref|NP_175317.1| 3-phosphoshikimate 1-carboxyvinyltransferase (5...   409  e-152
gb|AAM63771.1| 5-enolpyruvylshikimate-3-phosphate (EPSP) synthas...   408  e-151
sp|P17688|AROA_BRANA 3-phosphoshikimate 1-carboxyvinyltransferas...   411  e-151
ref|NP_182055.1| 3-phosphoshikimate 1-carboxyvinyltransferase (5...   409  e-150

>gb|AAL65913.1|AF440389_1 5-enolpyruvylshikimate-3-phosphate synthase [Orychophragmus
            violaceus]
          Length = 518

 Score =  410 bits (1055), Expect(2) = e-152
 Identities = 218/331 (65%), Positives = 253/331 (75%), Gaps = 4/331 (1%)
 Frame = +3

Query: 615  LPRMRERPIEDLVDGLVQLGVDAKCTMGTGCPPVEVNSKG-LPTGKVYLSGKVSSQYLTA 791
            +PRMRERPI DLV GL QLG D +CT+GT CPPV VN+ G LP GKV LSG +SSQYLTA
Sbjct: 199  VPRMRERPIGDLVVGLKQLGADVECTLGTNCPPVRVNANGGLPGGKVKLSGSISSQYLTA 258

Query: 792  LLMAAPLAVPGGAGGDAIEIIIKDELVSQPYVDMTVKLMERFGVVVERLNGLQHLRIPAG 971
            LLMAAPLA+     GD +EI I D+L+S PYV+MT+KLMERFGV  E         +  G
Sbjct: 259  LLMAAPLAL-----GD-VEIEIIDKLISVPYVEMTLKLMERFGVSAEHSESWDRFFVKGG 312

Query: 972  QTYKTPGEAYVEGDASSASYFLAGATITGGTVTVEGCGSDSLQGDVRFAEVMGLLGAKVE 1151
            Q YK+PG AYVEGDASSASYFLAGA ITG TVTVEGCG+ SLQGDV+FAEV+  +G KV 
Sbjct: 313  QKYKSPGNAYVEGDASSASYFLAGAAITGETVTVEGCGTTSLQGDVKFAEVLEKMGCKVS 372

Query: 1152 WSPYSITITGPS--AFG-KPITGIDHDCNDIPDAAMTLAVAALFADRPTAIRNVYNWRVK 1322
            W+  S+T+TGPS  AFG + +  +D + N +PD AMTLAV ALFAD PT IR+V +WRVK
Sbjct: 373  WTENSVTVTGPSRDAFGMRHLRAVDVNMNKMPDVAMTLAVVALFADGPTTIRDVASWRVK 432

Query: 1323 ETERMVAIVTELRKLGAEVEEGRDYCIVTPPPGGVKGVKANVGIDTYDDHRMAMAFSLVA 1502
            ETERM+AI TELRKLGA VEEG DYC++T PP  VK  +    IDTYDDHRMAMAFSL A
Sbjct: 433  ETERMIAICTELRKLGATVEEGSDYCVIT-PPAKVKPAE----IDTYDDHRMAMAFSLAA 487

Query: 1503 AAGVPVVIRDPGCTRKTFPTYFKVFESVAQH 1595
             A VPV I+DPGCTRKTFP YF+V ES+ +H
Sbjct: 488  CADVPVTIKDPGCTRKTFPDYFQVLESITKH 518

 Score =  153 bits (387), Expect(2) = e-152
 Identities = 93/177 (52%), Positives = 115/177 (64%), Gaps = 17/177 (9%)
 Frame = +2

Query: 137 ASRPASSLSVSASSVAPAPACSAPAGAGR----------RAVVVRAS-ATKEKVEELTIQ 283
           +++P S LS+S  S  P     +  G  +          R V V AS +T EK  E+ +Q
Sbjct: 23  SNQPKSPLSISLKSQQPRAYPISSWGLKKSGMMLNDSVIRPVTVTASVSTAEKASEIVLQ 82

Query: 284 PVKKIAGTVKLPGSKSLSNRILLLAALSEGTTLVKNLLDSDDIRYMVGALKALNVKLEEN 463
           P+K+I+G +KLPGSKSLSNRILLLAALSEGTT+V NLL+SDDI YM+ ALK L + +E +
Sbjct: 83  PIKEISGLIKLPGSKSLSNRILLLAALSEGTTVVDNLLNSDDINYMLDALKKLGLNVERD 142

Query: 464 WEAGEMVVHGCGGRF-----DSAGAELFLGNAGTAMRPLTAAVVAA-GRGKFVLDGV 616
            E    VV GCGG F       +  EL+LGNAGTAMRPLTAAV AA G   +VLDGV
Sbjct: 143 SENNRAVVEGCGGIFPASVDSKSDIELYLGNAGTAMRPLTAAVTAAGGNASYVLDGV 199

>ref|NP_175317.1| 3-phosphoshikimate 1-carboxyvinyltransferase
            (5-enolpyruvylshikimate-3-phosphate) (EPSP synthase),
            putative [Arabidopsis thaliana] gi|25287161|pir||D96526
            hypothetical protein F27K7.11 [imported] - Arabidopsis
            thaliana gi|11094810|gb|AAG29739.1|AC084414_7
            5-enolpyruvylshikimate-3-phosphate (EPSP) synthase,
            putative [Arabidopsis thaliana]
            gi|12321113|gb|AAG50661.1|AC084242_5
            5-enolpyruvylshikimate-3-phosphate, putative [Arabidopsis
            thaliana] gi|13430624|gb|AAK25934.1|AF360224_1 putative
            5-enolpyruvylshikimate-3-phosphate (EPSP) synthase
            [Arabidopsis thaliana] gi|14532882|gb|AAK64123.1|
            putative 5-enolpyruvylshikimate-3-phosphate synthase
            [Arabidopsis thaliana]
          Length = 521

 Score =  409 bits (1052), Expect(2) = e-152
 Identities = 218/331 (65%), Positives = 251/331 (74%), Gaps = 4/331 (1%)
 Frame = +3

Query: 615  LPRMRERPIEDLVDGLVQLGVDAKCTMGTGCPPVEVNSKG-LPTGKVYLSGKVSSQYLTA 791
            +PRMRERPI DLV GL QLG D +CT+GT CPPV VN+ G LP GKV LSG +SSQYLTA
Sbjct: 202  VPRMRERPIGDLVVGLKQLGADVECTLGTNCPPVRVNANGGLPGGKVKLSGSISSQYLTA 261

Query: 792  LLMAAPLAVPGGAGGDAIEIIIKDELVSQPYVDMTVKLMERFGVVVERLNGLQHLRIPAG 971
            LLMAAPLA+     GD +EI I D+L+S PYV+MT+KLMERFGV  E         +  G
Sbjct: 262  LLMAAPLAL-----GD-VEIEIVDKLISVPYVEMTLKLMERFGVSAEHSESWDRFFVKGG 315

Query: 972  QTYKTPGEAYVEGDASSASYFLAGATITGGTVTVEGCGSDSLQGDVRFAEVMGLLGAKVE 1151
            Q YK+PG AYVEGDASSASYFLAGA ITG TVTVEGCG+ SLQGDV+FAEV+  +G KV 
Sbjct: 316  QKYKSPGNAYVEGDASSASYFLAGAAITGETVTVEGCGTTSLQGDVKFAEVLEKMGCKVS 375

Query: 1152 WSPYSITITGPS--AFG-KPITGIDHDCNDIPDAAMTLAVAALFADRPTAIRNVYNWRVK 1322
            W+  S+T+TGPS  AFG + +  ID + N +PD AMTLAV ALFAD PT IR+V +WRVK
Sbjct: 376  WTENSVTVTGPSRDAFGMRHLRAIDVNMNKMPDVAMTLAVVALFADGPTTIRDVASWRVK 435

Query: 1323 ETERMVAIVTELRKLGAEVEEGRDYCIVTPPPGGVKGVKANVGIDTYDDHRMAMAFSLVA 1502
            ETERM+AI TELRKLGA VEEG DYC++TPP    K VK    IDTYDDHRMAMAFSL A
Sbjct: 436  ETERMIAICTELRKLGATVEEGSDYCVITPP----KKVKP-AEIDTYDDHRMAMAFSLAA 490

Query: 1503 AAGVPVVIRDPGCTRKTFPTYFKVFESVAQH 1595
             A VP+ I DPGCTRKTFP YF+V E + +H
Sbjct: 491  CADVPITINDPGCTRKTFPDYFQVLERITKH 521

 Score =  152 bits (383), Expect(2) = e-152
 Identities = 86/142 (60%), Positives = 104/142 (72%), Gaps = 7/142 (4%)
 Frame = +2

Query: 212 GAGRRAVVVRAS-ATKEKVEELTIQPVKKIAGTVKLPGSKSLSNRILLLAALSEGTTLVK 388
           G+  R V VRAS +T EK  E+ +QP+++I+G +KLPGSKSLSNRILLLAALSEGTT+V 
Sbjct: 61  GSEIRPVKVRASVSTAEKASEIVLQPIREISGLIKLPGSKSLSNRILLLAALSEGTTVVD 120

Query: 389 NLLDSDDIRYMVGALKALNVKLEENWEAGEMVVHGCGGRF-----DSAGAELFLGNAGTA 553
           NLL+SDDI YM+ ALK L + +E + E    VV GCGG F       +  EL+LGNAGTA
Sbjct: 121 NLLNSDDINYMLDALKILGLNVETHSENNRAVVEGCGGVFPASIDSKSDIELYLGNAGTA 180

Query: 554 MRPLTAAVVAA-GRGKFVLDGV 616
           MRPLTAAV AA G   +VLDGV
Sbjct: 181 MRPLTAAVTAAGGNASYVLDGV 202

>gb|AAM63771.1| 5-enolpyruvylshikimate-3-phosphate (EPSP) synthase, putative
            [Arabidopsis thaliana]
          Length = 521

 Score =  408 bits (1048), Expect(2) = e-151
 Identities = 217/331 (65%), Positives = 251/331 (75%), Gaps = 4/331 (1%)
 Frame = +3

Query: 615  LPRMRERPIEDLVDGLVQLGVDAKCTMGTGCPPVEVNSKG-LPTGKVYLSGKVSSQYLTA 791
            +P+MRERPI DLV GL QLG D +CT+GT CPPV VN+ G LP GKV LSG +SSQYLTA
Sbjct: 202  VPQMRERPIGDLVVGLKQLGADVECTLGTNCPPVRVNANGGLPGGKVKLSGSISSQYLTA 261

Query: 792  LLMAAPLAVPGGAGGDAIEIIIKDELVSQPYVDMTVKLMERFGVVVERLNGLQHLRIPAG 971
            LLMAAPLA+     GD +EI I D+L+S PYV+MT+KLMERFGV  E         +  G
Sbjct: 262  LLMAAPLAL-----GD-VEIEIVDKLISVPYVEMTLKLMERFGVSAEHSESWDRFFVKGG 315

Query: 972  QTYKTPGEAYVEGDASSASYFLAGATITGGTVTVEGCGSDSLQGDVRFAEVMGLLGAKVE 1151
            Q YK+PG AYVEGDASSASYFLAGA ITG TVTVEGCG+ SLQGDV+FAEV+  +G KV 
Sbjct: 316  QKYKSPGNAYVEGDASSASYFLAGAAITGETVTVEGCGTTSLQGDVKFAEVLEKMGCKVS 375

Query: 1152 WSPYSITITGPS--AFG-KPITGIDHDCNDIPDAAMTLAVAALFADRPTAIRNVYNWRVK 1322
            W+  S+T+TGPS  AFG + +  ID + N +PD AMTLAV ALFAD PT IR+V +WRVK
Sbjct: 376  WTENSVTVTGPSRDAFGMRHLRAIDVNMNKMPDVAMTLAVVALFADGPTTIRDVASWRVK 435

Query: 1323 ETERMVAIVTELRKLGAEVEEGRDYCIVTPPPGGVKGVKANVGIDTYDDHRMAMAFSLVA 1502
            ETERM+AI TELRKLGA VEEG DYC++TPP    K VK    IDTYDDHRMAMAFSL A
Sbjct: 436  ETERMIAICTELRKLGATVEEGSDYCVITPP----KKVKP-AEIDTYDDHRMAMAFSLAA 490

Query: 1503 AAGVPVVIRDPGCTRKTFPTYFKVFESVAQH 1595
             A VP+ I DPGCTRKTFP YF+V E + +H
Sbjct: 491  CADVPITINDPGCTRKTFPDYFQVLERITKH 521

 Score =  152 bits (383), Expect(2) = e-151
 Identities = 86/142 (60%), Positives = 104/142 (72%), Gaps = 7/142 (4%)
 Frame = +2

Query: 212 GAGRRAVVVRAS-ATKEKVEELTIQPVKKIAGTVKLPGSKSLSNRILLLAALSEGTTLVK 388
           G+  R V VRAS +T EK  E+ +QP+++I+G +KLPGSKSLSNRILLLAALSEGTT+V 
Sbjct: 61  GSEIRPVKVRASVSTAEKASEIVLQPIREISGLIKLPGSKSLSNRILLLAALSEGTTVVD 120

Query: 389 NLLDSDDIRYMVGALKALNVKLEENWEAGEMVVHGCGGRF-----DSAGAELFLGNAGTA 553
           NLL+SDDI YM+ ALK L + +E + E    VV GCGG F       +  EL+LGNAGTA
Sbjct: 121 NLLNSDDINYMLDALKILGLNVETHSENNRAVVEGCGGVFPASIDSKSDIELYLGNAGTA 180

Query: 554 MRPLTAAVVAA-GRGKFVLDGV 616
           MRPLTAAV AA G   +VLDGV
Sbjct: 181 MRPLTAAVTAAGGNASYVLDGV 202

>sp|P17688|AROA_BRANA 3-phosphoshikimate 1-carboxyvinyltransferase, chloroplast precursor
            (5-enolpyruvylshikimate-3-phosphate synthase) (EPSP
            synthase) gi|99781|pir||S12744 3-phosphoshikimate
            1-carboxyvinyltransferase (EC 2.5.1.19) precursor - rape
            gi|17815|emb|CAA35839.1|
            5-enolpyruvylshikimate-3-phosphate synthase [Brassica
            napus]
          Length = 516

 Score =  411 bits (1056), Expect(2) = e-151
 Identities = 218/331 (65%), Positives = 254/331 (75%), Gaps = 4/331 (1%)
 Frame = +3

Query: 615  LPRMRERPIEDLVDGLVQLGVDAKCTMGTGCPPVEVNSKG-LPTGKVYLSGKVSSQYLTA 791
            +PRMRERPI DLV GL QLG D +CT+GT CPPV VN+ G LP GKV LSG +SSQYLTA
Sbjct: 197  VPRMRERPIGDLVVGLKQLGADVECTLGTNCPPVRVNANGGLPGGKVKLSGSISSQYLTA 256

Query: 792  LLMAAPLAVPGGAGGDAIEIIIKDELVSQPYVDMTVKLMERFGVVVERLNGLQHLRIPAG 971
            LLMAAPLA+     GD +EI I D+L+S PYV+MT+KLMERFGV  E  +      +  G
Sbjct: 257  LLMAAPLAL-----GD-VEIEIIDKLISVPYVEMTLKLMERFGVSAEHSDSWDRFFVKGG 310

Query: 972  QTYKTPGEAYVEGDASSASYFLAGATITGGTVTVEGCGSDSLQGDVRFAEVMGLLGAKVE 1151
            Q YK+PG AYVEGDASSASYFLAGA ITG TVTVEGCG+ SLQGDV+FAEV+  +G KV 
Sbjct: 311  QKYKSPGNAYVEGDASSASYFLAGAAITGETVTVEGCGTTSLQGDVKFAEVLEKMGCKVS 370

Query: 1152 WSPYSITITGPS--AFG-KPITGIDHDCNDIPDAAMTLAVAALFADRPTAIRNVYNWRVK 1322
            W+  S+T+TGPS  AFG + +  +D + N +PD AMTLAV ALFAD PT IR+V +WRVK
Sbjct: 371  WTENSVTVTGPSRDAFGMRHLRAVDVNMNKMPDVAMTLAVVALFADGPTTIRDVASWRVK 430

Query: 1323 ETERMVAIVTELRKLGAEVEEGRDYCIVTPPPGGVKGVKANVGIDTYDDHRMAMAFSLVA 1502
            ETERM+AI TELRKLGA VEEG DYC++T PP  VK  +    IDTYDDHRMAMAFSL A
Sbjct: 431  ETERMIAICTELRKLGATVEEGSDYCVIT-PPAKVKPAE----IDTYDDHRMAMAFSLAA 485

Query: 1503 AAGVPVVIRDPGCTRKTFPTYFKVFESVAQH 1595
             A VPV I+DPGCTRKTFP YF+V ES+ +H
Sbjct: 486  CADVPVTIKDPGCTRKTFPDYFQVLESITKH 516

 Score =  147 bits (371), Expect(2) = e-151
 Identities = 84/142 (59%), Positives = 102/142 (71%), Gaps = 7/142 (4%)
 Frame = +2

Query: 212 GAGRRAVVVRAS-ATKEKVEELTIQPVKKIAGTVKLPGSKSLSNRILLLAALSEGTTLVK 388
           G+  R V V AS +T EK  E+ +QP+++I+G +KLPGSKSLSNRILLLAALSEGTT+V 
Sbjct: 56  GSVIRPVKVTASVSTSEKASEIVLQPIREISGLIKLPGSKSLSNRILLLAALSEGTTVVD 115

Query: 389 NLLDSDDIRYMVGALKALNVKLEENWEAGEMVVHGCGGRF-----DSAGAELFLGNAGTA 553
           NLL+SDDI YM+ ALK L + +E +      VV GCGG F       +  EL+LGNAGTA
Sbjct: 116 NLLNSDDINYMLDALKKLGLNVERDSVNNRAVVEGCGGIFPASLDSKSDIELYLGNAGTA 175

Query: 554 MRPLTAAVVAA-GRGKFVLDGV 616
           MRPLTAAV AA G   +VLDGV
Sbjct: 176 MRPLTAAVTAAGGNASYVLDGV 197

>ref|NP_182055.1| 3-phosphoshikimate 1-carboxyvinyltransferase
            (5-enolpyruvylshikimate-3-phosphate) (EPSP synthase)
            [Arabidopsis thaliana] gi|25287162|pir||H84888
            hypothetical protein At2g45300 [imported] - Arabidopsis
            thaliana gi|2583124|gb|AAB82633.1|
            5-enolpyruvylshikimate-3-phosphate (EPSP) synthase
            [Arabidopsis thaliana]
          Length = 520

 Score =  409 bits (1051), Expect(2) = e-150
 Identities = 217/331 (65%), Positives = 252/331 (75%), Gaps = 4/331 (1%)
 Frame = +3

Query: 615  LPRMRERPIEDLVDGLVQLGVDAKCTMGTGCPPVEVNSKG-LPTGKVYLSGKVSSQYLTA 791
            +PRMRERPI DLV GL QLG D +CT+GT CPPV VN+ G LP GKV LSG +SSQYLTA
Sbjct: 201  VPRMRERPIGDLVVGLKQLGADVECTLGTNCPPVRVNANGGLPGGKVKLSGSISSQYLTA 260

Query: 792  LLMAAPLAVPGGAGGDAIEIIIKDELVSQPYVDMTVKLMERFGVVVERLNGLQHLRIPAG 971
            LLM+APLA+     GD +EI I D+L+S PYV+MT+KLMERFGV VE  +      +  G
Sbjct: 261  LLMSAPLAL-----GD-VEIEIVDKLISVPYVEMTLKLMERFGVSVEHSDSWDRFFVKGG 314

Query: 972  QTYKTPGEAYVEGDASSASYFLAGATITGGTVTVEGCGSDSLQGDVRFAEVMGLLGAKVE 1151
            Q YK+PG AYVEGDASSASYFLAGA ITG TVTVEGCG+ SLQGDV+FAEV+  +G KV 
Sbjct: 315  QKYKSPGNAYVEGDASSASYFLAGAAITGETVTVEGCGTTSLQGDVKFAEVLEKMGCKVS 374

Query: 1152 WSPYSITITGP--SAFG-KPITGIDHDCNDIPDAAMTLAVAALFADRPTAIRNVYNWRVK 1322
            W+  S+T+TGP   AFG + +  ID + N +PD AMTLAV ALFAD PT IR+V +WRVK
Sbjct: 375  WTENSVTVTGPPRDAFGMRHLRAIDVNMNKMPDVAMTLAVVALFADGPTTIRDVASWRVK 434

Query: 1323 ETERMVAIVTELRKLGAEVEEGRDYCIVTPPPGGVKGVKANVGIDTYDDHRMAMAFSLVA 1502
            ETERM+AI TELRKLGA VEEG DYC++TPP    K VK    IDTYDDHRMAMAFSL A
Sbjct: 435  ETERMIAICTELRKLGATVEEGSDYCVITPP----KKVK-TAEIDTYDDHRMAMAFSLAA 489

Query: 1503 AAGVPVVIRDPGCTRKTFPTYFKVFESVAQH 1595
             A VP+ I DPGCTRKTFP YF+V E + +H
Sbjct: 490  CADVPITINDPGCTRKTFPDYFQVLERITKH 520

 Score =  148 bits (373), Expect(2) = e-150
 Identities = 80/134 (59%), Positives = 99/134 (73%), Gaps = 6/134 (4%)
 Frame = +2

Query: 233 VVRASATKEKVEELTIQPVKKIAGTVKLPGSKSLSNRILLLAALSEGTTLVKNLLDSDDI 412
           V+ + +T EK  E+ +QP+++I+G +KLPGSKSLSNRILLLAALSEGTT+V NLL+SDDI
Sbjct: 68  VMSSVSTAEKASEIVLQPIREISGLIKLPGSKSLSNRILLLAALSEGTTVVDNLLNSDDI 127

Query: 413 RYMVGALKALNVKLEENWEAGEMVVHGCGGRF-----DSAGAELFLGNAGTAMRPLTAAV 577
            YM+ ALK L + +E + E    VV GCGG F       +  EL+LGNAGTAMRPLTAAV
Sbjct: 128 NYMLDALKRLGLNVETDSENNRAVVEGCGGIFPASIDSKSDIELYLGNAGTAMRPLTAAV 187

Query: 578 VAA-GRGKFVLDGV 616
            AA G   +VLDGV
Sbjct: 188 TAAGGNASYVLDGV 201



EST assemble image


clone accession position
1 LCL036b08_r AV628065 1 525
2 HCL032h01_r AV641394 7 455
3 HC096d10_r AV639214 7 430
4 HC056g02_r AV636226 9 379
5 LC038b03_r AV621586 12 492
6 LCL054h02_r AV629229 17 458
7 CL07e07_r AV393461 19 493
8 MXL018e10_r BP094130 25 485
9 MXL029f11_r BP094787 53 223
10 LCL012e06_r AV626626 350 908
11 MX220a11_r BP090180 416 738
12 CM081d12_r AV391884 504 1028
13 LCL070c02_r AV629969 653 966
14 LCL042e06_r AV628479 785 1243
15 HC046e05_r AV635453 806 1383
16 HCL030f09_r AV641259 889 1369
17 HC075h10_r AV637662 920 1252
18 CM002d11_r AV397873 1089 1595
19 HC007e04_r AV632382 1150 1645




Chlamydomonas reinhardtii
Kazusa DNA Research Institute