Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC000133A_C01 KCC000133A_c01
(547 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_193612.1| myb family transcription factor [Arabidopsis th... 55 6e-07
ref|NP_186802.1| myb family transcription factor [Arabidopsis th... 54 1e-06
gb|AAM67076.1| putative transcription factor [Arabidopsis thaliana] 54 1e-06
gb|AAL90628.1|AF470060_1 P-type R2R3 Myb protein [Sorghum bicolor] 42 3e-06
ref|NP_568891.1| myb family transcription factor [Arabidopsis th... 52 4e-06
>ref|NP_193612.1| myb family transcription factor [Arabidopsis thaliana]
gi|7446175|pir||T04869 transforming protein myb homolog
F28A21.180 - Arabidopsis thaliana
gi|4539396|emb|CAB37462.1| myb-like protein [Arabidopsis
thaliana] gi|5823339|gb|AAD53108.1|AF176003_1 putative
transcription factor [Arabidopsis thaliana]
gi|7268671|emb|CAB78879.1| myb-like protein [Arabidopsis
thaliana]
Length = 427
Score = 55.1 bits (131), Expect = 6e-07
Identities = 35/100 (35%), Positives = 48/100 (48%), Gaps = 13/100 (13%)
Frame = +1
Query: 178 SHIPLGRPVAAAGAMTETDHRRSRPD-----WSRAQSLRLIQLHVKLGNSWTEIAKQLPG 342
SHI P E H RPD WS + LI+ H ++GN W EIAK+LPG
Sbjct: 241 SHIAQVLPGRIGKQCRERWHNHLRPDIKKETWSEEEDRVLIEFHKEIGNKWAEIAKRLPG 300
Query: 343 RTQNDCKNFF-------FGALRAKRGY-RDNLVYAYARAL 438
RT+N KN + F + + Y R +L+ Y ++L
Sbjct: 301 RTENSIKNHWNATKRRQFSKRKCRSKYPRPSLLQDYIKSL 340
Score = 31.6 bits (70), Expect = 7.2
Identities = 17/45 (37%), Positives = 23/45 (50%), Gaps = 1/45 (2%)
Frame = +1
Query: 256 WSRAQSLRLIQLHVKLG-NSWTEIAKQLPGRTQNDCKNFFFGALR 387
W+ + LIQL K G W+ IA+ LPGR C+ + LR
Sbjct: 220 WTAEEDRVLIQLVEKYGLRKWSHIAQVLPGRIGKQCRERWHNHLR 264
>ref|NP_186802.1| myb family transcription factor [Arabidopsis thaliana]
gi|6016712|gb|AAF01538.1|AC009325_8 putative
transcription factor [Arabidopsis thaliana]
gi|26451234|dbj|BAC42719.1| putative transcription
factor [Arabidopsis thaliana] gi|28973339|gb|AAO63994.1|
putative myb family transcription factor [Arabidopsis
thaliana]
Length = 206
Score = 53.9 bits (128), Expect = 1e-06
Identities = 26/47 (55%), Positives = 32/47 (67%), Gaps = 5/47 (10%)
Frame = +1
Query: 247 RPDWSRA-----QSLRLIQLHVKLGNSWTEIAKQLPGRTQNDCKNFF 372
RPD R + L +IQLH KLGN W++IAK LPGRT N+ KNF+
Sbjct: 75 RPDVRRGNITEEEQLLIIQLHAKLGNRWSKIAKHLPGRTDNEIKNFW 121
>gb|AAM67076.1| putative transcription factor [Arabidopsis thaliana]
Length = 206
Score = 53.9 bits (128), Expect = 1e-06
Identities = 26/47 (55%), Positives = 32/47 (67%), Gaps = 5/47 (10%)
Frame = +1
Query: 247 RPDWSRA-----QSLRLIQLHVKLGNSWTEIAKQLPGRTQNDCKNFF 372
RPD R + L +IQLH KLGN W++IAK LPGRT N+ KNF+
Sbjct: 75 RPDVRRGNITTEEQLLIIQLHAKLGNRWSKIAKHLPGRTDNEIKNFW 121
>gb|AAL90628.1|AF470060_1 P-type R2R3 Myb protein [Sorghum bicolor]
Length = 188
Score = 42.4 bits (98), Expect(2) = 3e-06
Identities = 18/42 (42%), Positives = 30/42 (70%)
Frame = +1
Query: 247 RPDWSRAQSLRLIQLHVKLGNSWTEIAKQLPGRTQNDCKNFF 372
R ++++ + +I+LH LGN W+ IA +LPGRT N+ KN++
Sbjct: 67 RGNFTQEEDELIIKLHQILGNKWSLIAGRLPGRTDNEIKNYW 108
Score = 30.0 bits (66), Expect(2) = 3e-06
Identities = 19/50 (38%), Positives = 23/50 (46%), Gaps = 5/50 (10%)
Frame = +2
Query: 413 WSTPTRARCRPPPPLLAGRGSRTSAXP-TPSPVPP--PTRQPCNK--WRR 547
W+TP ++ P GR SR P P P PP P RQ + WRR
Sbjct: 108 WNTPIQSASSSPAASTHGRTSRRVQAPLLPPPAPPLSPPRQASHSPAWRR 157
>ref|NP_568891.1| myb family transcription factor [Arabidopsis thaliana]
gi|9759218|dbj|BAB09630.1| contains similarity to
Myb-related transcription factor~gene_id:K19M22.5
[Arabidopsis thaliana]
gi|14161417|gb|AAK54741.1|AF371978_1 putative
transcription factor MYB119 [Arabidopsis thaliana]
Length = 430
Score = 52.4 bits (124), Expect = 4e-06
Identities = 24/62 (38%), Positives = 34/62 (54%), Gaps = 5/62 (8%)
Frame = +1
Query: 235 HRRSRPD-----WSRAQSLRLIQLHVKLGNSWTEIAKQLPGRTQNDCKNFFFGALRAKRG 399
H RPD WS + L++ H+++GN W EIAK +PGRT+N KN + R +
Sbjct: 148 HNHLRPDIKKDGWSEEEERVLVESHMRIGNKWAEIAKLIPGRTENSIKNHWNATKRRQNS 207
Query: 400 YR 405
R
Sbjct: 208 KR 209
