Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC000132A_C03 KCC000132A_c03
(724 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAK06774.1|AF323725_1 PsaN precursor [Chlamydomonas reinhardtii] 182 6e-45
sp|Q9SBN5|PSAN_VOLCA Photosystem I reaction centre subunit N, ch... 144 1e-33
ref|NP_201209.1| photosystem I reaction center subunit PSI-N pre... 68 1e-10
sp|P31093|PSAN_HORVU Photosystem I reaction centre subunit N, ch... 65 1e-09
sp|O65107|PSAN_MAIZE Photosystem I reaction centre subunit N, ch... 65 1e-09
>gb|AAK06774.1|AF323725_1 PsaN precursor [Chlamydomonas reinhardtii]
Length = 139
Score = 182 bits (461), Expect = 6e-45
Identities = 106/142 (74%), Positives = 109/142 (76%)
Frame = +2
Query: 47 MAISARSSIKMQAARPARATTVVVRASAGRRELLGLGCPGSGPDHDPGPRRQRRRC*VTC 226
MAISARSSIKMQAARPARATTVVVRASAGRRELLGLG G P
Sbjct: 1 MAISARSSIKMQAARPARATTVVVRASAGRRELLGLGALALGLTMTLAPVANAGVVEDLQ 60
Query: 227 RPSLACQQGPELTRSCLATSYANLARSRTVYDGTCTFPENFFGCEELAFNKGVKFIAEGN 406
S A + + R LATSYANLARSRTVYDGTCTFPENFFGCEELAFNKGVKFIAE +
Sbjct: 61 AKSAANKALNDKKR--LATSYANLARSRTVYDGTCTFPENFFGCEELAFNKGVKFIAE-D 117
Query: 407 IKIECEGKTAKECGSKFTLRSN 472
IKIECEGKTAKECGSKFTLRSN
Sbjct: 118 IKIECEGKTAKECGSKFTLRSN 139
>sp|Q9SBN5|PSAN_VOLCA Photosystem I reaction centre subunit N, chloroplast precursor
(PSI-N) gi|5902586|gb|AAD55563.1|AF110781_1 photosystem
I reaction center subunit PSAN precursor [Volvox carteri
f. nagariensis]
Length = 139
Score = 144 bits (364), Expect = 1e-33
Identities = 89/145 (61%), Positives = 98/145 (67%), Gaps = 4/145 (2%)
Frame = +2
Query: 47 MAISARSSI-KMQAARPARATTVVVRASA-GRRELLGLGCPGSGPDHDPGPRRQRRRC*V 220
MA++ R+ K+QAARPARATTVV RASA RRELLGLG P
Sbjct: 1 MAVAMRAQCAKVQAARPARATTVVCRASAQSRRELLGLGVLLGAAALAPAANAG------ 54
Query: 221 TCRPSLACQQGPEL--TRSCLATSYANLARSRTVYDGTCTFPENFFGCEELAFNKGVKFI 394
LA + + LATSYANLARSRTVYDGTC FPENFFGCEELAFNKGVK+I
Sbjct: 55 VVEDLLAKSAANKALNNKKRLATSYANLARSRTVYDGTCQFPENFFGCEELAFNKGVKYI 114
Query: 395 AEGNIKIECEGKTAKECGSKFTLRS 469
AE ++KIECEGK AK CGSKFTLRS
Sbjct: 115 AE-DLKIECEGKDAKSCGSKFTLRS 138
>ref|NP_201209.1| photosystem I reaction center subunit PSI-N precursor (PSI-N)
[Arabidopsis thaliana] gi|1709825|sp|P49107|PSAN_ARATH
Photosystem I reaction centre subunit N, chloroplast
precursor (PSI-N) gi|1237124|gb|AAA93075.1| PSI-N
gi|10176952|dbj|BAB10272.1| photosystem I reaction
centre subunit psaN precursor [Arabidopsis thaliana]
gi|17065518|gb|AAL32913.1| photosystem I reaction centre
subunit psaN precursor [Arabidopsis thaliana]
gi|20148531|gb|AAM10156.1| photosystem I reaction center
subunit psaN precursor [Arabidopsis thaliana]
Length = 171
Score = 68.2 bits (165), Expect = 1e-10
Identities = 35/59 (59%), Positives = 43/59 (72%)
Frame = +2
Query: 275 LATSYANLARSRTVYDGTCTFPENFFGCEELAFNKGVKFIAEGNIKIECEGKTAKECGS 451
LATS AN AR+ TV G+C FPENF GC++LA K V FI+E +I +ECEGK +CGS
Sbjct: 108 LATSGANFARAFTVQFGSCKFPENFTGCQDLAKQKKVPFISE-DIALECEGKDKYKCGS 165
>sp|P31093|PSAN_HORVU Photosystem I reaction centre subunit N, chloroplast precursor
(PSI-N) gi|479690|pir||S35159 photosystem I chain psaN -
barley gi|19095|emb|CAA47056.1| photosystem I subunit N
[Hordeum vulgare subsp. vulgare]
Length = 145
Score = 64.7 bits (156), Expect = 1e-09
Identities = 50/126 (39%), Positives = 64/126 (50%), Gaps = 2/126 (1%)
Frame = +2
Query: 80 QAARPARATTVVVRASAGRRE-LLGLGCPGSGPDHDPGPRRQRRRC*VTCRPSLACQQGP 256
Q+A PA A V V + RR LLGL + G R V +
Sbjct: 19 QSASPAAAKRVQVAPAKDRRSALLGLAAVFAATAASAGSARAS----VFDEYLEKSKLNK 74
Query: 257 ELT-RSCLATSYANLARSRTVYDGTCTFPENFFGCEELAFNKGVKFIAEGNIKIECEGKT 433
EL + ATS AN AR+ TV G+C FP NF GC++LA K V FI + +++IECEGK
Sbjct: 75 ELNDKKRAATSGANFARAYTVQFGSCKFPYNFTGCQDLAKQKKVPFITD-DLEIECEGKE 133
Query: 434 AKECGS 451
+CGS
Sbjct: 134 KFKCGS 139
>sp|O65107|PSAN_MAIZE Photosystem I reaction centre subunit N, chloroplast precursor
(PSI-N) gi|7489798|pir||T01577 photosystem I protein
psaN precursor - maize gi|2981214|gb|AAC26197.1|
photosystem I complex PsaN subunit precursor [Zea mays]
Length = 112
Score = 64.7 bits (156), Expect = 1e-09
Identities = 33/59 (55%), Positives = 43/59 (71%)
Frame = +2
Query: 275 LATSYANLARSRTVYDGTCTFPENFFGCEELAFNKGVKFIAEGNIKIECEGKTAKECGS 451
LATS AN AR+ TV G+C FP NF GC++LA K V FI++ +++IECEGK +CGS
Sbjct: 49 LATSGANFARAYTVEFGSCQFPYNFTGCQDLAKQKKVPFISD-DLEIECEGKEKFKCGS 106
