KCC000079A_c02
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC000079A_C02 KCC000079A_c02
CTGCAATCGGATTATGATGAGTTTAAAGCTTGTTCAGGGTGTCAGGCTACACGAGCATAA
AGCTTGTAAATTTGCTCCGTCGCGACCCCGCGCACACTCAGCACTGTCACACCCGGTTTC
GAGACCGGTTCTCTCACGACAAGCCACCGCCGCACCAGAGGCGCAAACCATGTCCGTCCA
AACCATTCCGGGTGTGGCTATCCTCGGGCCAGTCACCGCAGAGCAGGCGAGCATCCTGTC
GCCAGAGGCCCAGCTTTTCGTCGCGACGCTGCACCGCACCTTCAACCCGCGCCGCAAGGG
AGTTGCTCAAGCGTCGCGATGAGCGCCAGAAGGACCTGGATGCTGGGCGCCTGCCCGACT
TCCTGCCTGAGACGGCGGCGGTGCGCGCCGACCCCGGCTGGAAGTGCGCCCCGCCCGCAC
CCGGCCTGGTGGACACGGCGCGTGGAGATCACGGGGCCGGTGGACCGCAAGATGGTGATC
AACGCCCTCAACAGCGGTGCCACACAGTACATGGCCGACTTTGAGGACTCGCACGCGCCC
ACGTGGGACGGCAACCTGGAGGGGCAGGTGAACATGCGTGACGCCGTGCGCCGCGCCATC
AGCTACACCGGACCCAACGGCAAGGTCTACAGCCTGCGCACTGACGGCAAGCTGGCCACG
CTGCTGGTCCGCCCCCGCGGCTGGCATCTGGTGGAGGCCCACTTCATGGTGGATGGCGAG
CCCTGTTCCGCCTCGCTGTTCGACTTCGGCCTGTTCTTCTTCCACAACGCTGCCGCCACC
CTAGCGGCCGGGCAGGGCCCCTACTTCTACCTGCCCAAGATGGAGAGCCATCTGGAGGCC
AGGCTGTGGAACGACGTGTTCAACGCCAGCCAGGACATGCTGCGGCTGCCGCGCGGCACT
GTGCGTGCCACGGTGCTGATCGAGACGCTGCTGGCCGCCTTTGAGATGGAGGAGATCCTG
TACGAGCTGAGGGACCACTCGTCGGGCCTGAACTGCGGCCGCTGGGACTACATCTTCAGC
TTCATCAAGAAGCTGCGCAACCACCCGCAGTTTGTGCTGCCAGACCGCTCCGCCGTCACC
ATGACCTCGCCCTTCATGGACGCCTACGTGCGACTGCTCATCAAGACCTGCCACAAGCGC
GGCGTGCACGCCATGGGCGGCATGGCGGCGCAGATCCCCATCAAGGACGACCCCGCAGCA
AACGCCGCCGCGCTGGCCAAGGTCCGCGGCGACAAGGAGCGCGAGGTGGTGGCCGGGCAC
GACGGCACGTGGGTGGCGCACCCCGCCCTGGTGCCCATCGCCATGGAGATTTTCAACAAG
CACATGCCCACGCCCAACCAGCTGCACGTGCGGCGCGACGACGTGACGGTGACGGCGCAC
AACCTGCTGGACGTGCGCGGCGGGGCGCTGCTGGCGGAGGGCGGCATCACGGAGAAGGGT
CTGCGCGACAACCTGTCGGTGGGCCTGGCCTACATGGAGAACTGGCTGCGGGGCGTGGGC
TGCGTGCCCATCCACAACCTCATGGAGGACGCCGCCACCGCCGAGATCAGCAGGTCTGCT
GTGTGGCAGTGGGTGCGGCACCACGCGCGCACTCGCGACGGCCGTGTGGTGACGGCGGCC
TGGGTGAAACGACCTGCTGGCGCAGGAGCTGGACCAGCTGAAGAGCAAGATGGGCGCCGA
GCGCTTCGCCCGCTCCAAGTACCCTCTGGCTGCTCAGCTGTTCCAGAGCACCATCACCGG
CGACGCCTACTCGGACTTCCTCACCACCCTGTGCTATGACCACATCGTCACCAAGACCCC
CAGCCGCATGTGAGCGCGGCGGCTGCGCAGAGCAGCTGGGGAGCGGCTGGAGCGGAGCTC
TGCTTGTGTGCGAGCGTCGACAGGAGCGATGGAAGCAGTGGCTGCATGATTGGGGACTGG
TTGGAAAGGAGGAGCGGTGGGGACAGCGGCAGAGAGGGCGAGGCCGGGGCGAGTGCAAGG
GTCTGATGTGAGGTGTGGCGCCCAGCGCGAGTGCGCTGTTTGGAATAAAGAGAGGACAGC
AGGCAGGGATGTCTCGCTGGCCTCTTGGCGCGGAGGCTGCCGCTCTAGTGCGCCGCCGCC
AGGAGGACAGGCCGGGCGTTTGTGCTATTGTGAATGTGATGTTGTACATGCAATGCCTTG
TGGTCAAGTGCGGGTTTGCAGGTAGCTGTGTTGCTGTGCGATGTGTGCACATGTTTACAC
ATCGTGTTGGGAACAGTCAGATTGTGTATGCAACGCTGCAGGATGTCGGGTTGAACTTGG
TTGGACACGCCAGACCGCGCGACCGGGACATGTCATCTCAGGCCCAATGCCAAGGGTCAC
ACACAGACGCTTGGCAAATATTGGCTGGGGGATAATGTCTGCAGTTCATGTGTAGATTGT
GTACATTGTTTAGGTTTGATGCCTGGGTCAGTCAGGAGCCGGCGCACTGGCGGCGCAGGG
CCGATGCGGGTGCCTGCGCGTGCCCATCACACGGGCGCAGCACATGATGCGTGCGTGCGG
GCAGGCGCTCGTATGGTGTACACCGCGAGTGCGTTAATGTTGGATCATGCGAAAAAAAAA
AAAAAAAAAACTCGAGACTACTGGATTCTTCGAGCACTGGCGTTGCAGGGACATTGATCT
CGATTGCGGAGTGGGGGAGGCGGCAGCGGCCGCGACGTGCTGCGGGACTTGGCGAGCGCC
AGAGCGGCCGAGCTGGGCGCAGCACGATGGAGGGCGGGCCGTGTGCAGAGGAGCGGTTGG
GCAGGAGTGTCCCCGGGGGGCCTCCTCTGGGGCACAGCATTTTGCACGGCTTGGTGGGAG
TGCCTGTGAGTG


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC000079A_C02 KCC000079A_c02
         (2832 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

gb|AAP57624.1| malate synthase [Aspergillus fumigatus]                557  0.0
ref|XP_322865.1| MALATE SYNTHASE, GLYOXYSOMAL [Neurospora crassa...   566  e-172
sp|P28344|MASY_EMENI Malate synthase, glyoxysomal gi|101791|pir|...   557  e-168
ref|ZP_00017596.1| hypothetical protein [Chloroflexus aurantiacus]    536  e-162
ref|NP_285600.1| malate synthase [Deinococcus radiodurans] gi|74...   504  e-159

>gb|AAP57624.1| malate synthase [Aspergillus fumigatus]
          Length = 528

 Score =  557 bits (1435), Expect(4) = 0.0
 Identities = 273/406 (67%), Positives = 312/406 (76%)
 Frame = +1

Query: 415  PHPAWWTRRVEITGPVDRKMVINALNSGATQYMADFEDSHAPTWDGNLEGQVNMRDAVRR 594
            P P    RRVEITGP DRKMV+NALN+             APTW   + GQVN+ DA+RR
Sbjct: 84   PAPGLVDRRVEITGPTDRKMVVNALNADV-----------APTWANMINGQVNLYDAIRR 132

Query: 595  AISYTGPNGKVYSLRTDGKLATLLVRPRGWHLVEAHFMVDGEPCSASLFDFGLFFFHNAA 774
             I +   N K Y LRTD  L TL+ R RGWHL E HF VDGEP S SLFDFGL+FFHNA 
Sbjct: 133  QIDFKQGN-KEYKLRTDRALPTLIARARGWHLDEKHFTVDGEPISGSLFDFGLYFFHNAK 191

Query: 775  ATLAAGQGPYFYLPKMESHLEARLWNDVFNASQDMLRLPRGTVRATVLIETLLAAFEMEE 954
              +A G GPYFYLPKMESHLEARLWNDVFN +QD + +PRGT+RATVLIET+ AAFEM+E
Sbjct: 192  ELVARGHGPYFYLPKMESHLEARLWNDVFNLAQDYIGMPRGTIRATVLIETITAAFEMDE 251

Query: 955  ILYELRDHSSGLNCGRWDYIFSFIKKLRNHPQFVLPDRSAVTMTSPFMDAYVRLLIKTCH 1134
            I+YELRDHSSGLNCGRWDYIFSFIKK R HP FVLPDRS VTMT PFMDAYV+LLIKTCH
Sbjct: 252  IIYELRDHSSGLNCGRWDYIFSFIKKFRKHPNFVLPDRSDVTMTVPFMDAYVKLLIKTCH 311

Query: 1135 KRGVHAMGGMAAQIPIKDDPAANAAALAKVRGDKEREVVAGHDGTWVAHPALVPIAMEIF 1314
            +RGVHAMGGMAAQIPIKDDP AN  A+  VR DK REV AGHDGTWVAHPAL  IA E+F
Sbjct: 312  RRGVHAMGGMAAQIPIKDDPVANDKAMESVRADKLREVRAGHDGTWVAHPALASIASEVF 371

Query: 1315 NKHMPTPNQLHVRRDDVTVTAHNLLDVRGGALLAEGGITEKGLRDNLSVGLAYMENWLRG 1494
            NK+MPTPNQL VRR DV +TA++LL+         G ITE+G+R NL++GL+YME WLRG
Sbjct: 372  NKYMPTPNQLFVRRQDVNITANDLLNTN-----VPGKITEEGIRKNLNIGLSYMEGWLRG 426

Query: 1495 VGCVPIHNLMEDAATAEISRSAVWQWVRHHARTRDGRVVTAAWVKR 1632
            VGC+PI+ LMEDAATAE+SRS +WQWV H   + +G+ +  A+  R
Sbjct: 427  VGCIPINYLMEDAATAEVSRSQLWQWVHHQVTSSEGKKIDKAYALR 472

 Score = 63.5 bits (153), Expect(4) = 0.0
 Identities = 28/46 (60%), Positives = 35/46 (75%)
 Frame = +3

Query: 297 RELLKRRDERQKDLDAGRLPDFLPETAAVRADPGWKCAPPAPGLVD 434
           + LL+RR +RQ ++D G LPDFLPET  +R +  WK APPAPGLVD
Sbjct: 45  KALLQRRIDRQAEIDKGHLPDFLPETKHIRENDAWKGAPPAPGLVD 90

 Score = 45.1 bits (105), Expect(4) = 0.0
 Identities = 23/39 (58%), Positives = 26/39 (65%)
 Frame = +2

Query: 194 VAILGPVTAEQASILSPEAQLFVATLHRTFNPRRKGVAQ 310
           VAILG V  E   IL+ EA  F+A LHRTFNP RK + Q
Sbjct: 11  VAILGAVNNEHRKILTKEACAFLAILHRTFNPTRKALLQ 49

 Score = 39.3 bits (90), Expect(4) = 0.0
 Identities = 21/53 (39%), Positives = 32/53 (59%)
 Frame = +2

Query: 1634 LLAQELDQLKSKMGAERFARSKYPLAAQLFQSTITGDAYSDFLTTLCYDHIVT 1792
            LL ++ D L +K        +K+ LAA+ F   +TG+ Y+DFLT+L Y+ I T
Sbjct: 473  LLQEQADSLAAKSPKG----NKFQLAARYFAGQVTGEDYADFLTSLLYNEIST 521

>ref|XP_322865.1| MALATE SYNTHASE, GLYOXYSOMAL [Neurospora crassa]
            gi|28920879|gb|EAA30217.1| MALATE SYNTHASE, GLYOXYSOMAL
            [Neurospora crassa]
          Length = 542

 Score =  566 bits (1458), Expect(3) = e-172
 Identities = 279/427 (65%), Positives = 320/427 (74%), Gaps = 1/427 (0%)
 Frame = +1

Query: 346  GACPTSCLRRRRCAPTPAGSAPRPHPAWWTRRVEITGPVDRKMVINALNSGATQYMADFE 525
            G  P      +     P      P P    RRVEITGP DRKMV+NALNS    YMADFE
Sbjct: 61   GVLPDFLPETKHIRENPTWKGAPPAPGLVDRRVEITGPTDRKMVVNALNSDVYTYMADFE 120

Query: 526  DSHAPTWDGNLEGQVNMRDAVRRAISYT-GPNGKVYSLRTDGKLATLLVRPRGWHLVEAH 702
            DS APTW   + GQVN+ DA+RR I +  GP  K Y LRTD  L TL+VRPRGWHL E H
Sbjct: 121  DSSAPTWANMVNGQVNLYDAIRRQIDFKQGP--KEYKLRTDRTLPTLIVRPRGWHLEEKH 178

Query: 703  FMVDGEPCSASLFDFGLFFFHNAAATLAAGQGPYFYLPKMESHLEARLWNDVFNASQDML 882
              +DGEP S SLFDFGL+FFHNA   +  G GPYFYLPKMESHLEARLWND FN +QD +
Sbjct: 179  VTIDGEPVSGSLFDFGLYFFHNAKELVQRGFGPYFYLPKMESHLEARLWNDAFNLAQDYV 238

Query: 883  RLPRGTVRATVLIETLLAAFEMEEILYELRDHSSGLNCGRWDYIFSFIKKLRNHPQFVLP 1062
             +PRGT+R TVLIET+LAAFEM+EI+YELR+HSSGLNCGRWDYIFS IKK RNH  FVLP
Sbjct: 239  GIPRGTIRGTVLIETILAAFEMDEIIYELREHSSGLNCGRWDYIFSTIKKFRNHSSFVLP 298

Query: 1063 DRSAVTMTSPFMDAYVRLLIKTCHKRGVHAMGGMAAQIPIKDDPAANAAALAKVRGDKER 1242
            DRS VTMT PFMDAYV+LLI+TCHKRGVHAMGGMAAQIPIKDD AAN  A+  VR DK R
Sbjct: 299  DRSCVTMTVPFMDAYVKLLIQTCHKRGVHAMGGMAAQIPIKDDKAANDKAMEGVRADKLR 358

Query: 1243 EVVAGHDGTWVAHPALVPIAMEIFNKHMPTPNQLHVRRDDVTVTAHNLLDVRGGALLAEG 1422
            E  AGHDGTWVAHPAL  IA+E+FNKHMPTPNQL  RR+DV +   +LL++        G
Sbjct: 359  EARAGHDGTWVAHPALASIALEVFNKHMPTPNQLFNRREDVKIGQQDLLNMN-----VPG 413

Query: 1423 GITEKGLRDNLSVGLAYMENWLRGVGCVPIHNLMEDAATAEISRSAVWQWVRHHARTRDG 1602
             ITE+G+R NL++GL YME W+RGVGCVPI+ LMEDAATAE+SRS +WQWV+H   T +G
Sbjct: 414  SITEEGIRKNLNIGLGYMEAWIRGVGCVPINYLMEDAATAEVSRSQLWQWVKHGVTTAEG 473

Query: 1603 RVVTAAW 1623
            + V  ++
Sbjct: 474  KRVDKSY 480

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 29/46 (63%), Positives = 35/46 (76%)
 Frame = +3

Query: 297 RELLKRRDERQKDLDAGRLPDFLPETAAVRADPGWKCAPPAPGLVD 434
           + LL+RR  RQ ++D G LPDFLPET  +R +P WK APPAPGLVD
Sbjct: 45  KNLLERRQLRQAEIDRGVLPDFLPETKHIRENPTWKGAPPAPGLVD 90

 Score = 45.1 bits (105), Expect(3) = e-172
 Identities = 23/47 (48%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
 Frame = +2

Query: 173 SVQTI-PGVAILGPVTAEQASILSPEAQLFVATLHRTFNPRRKGVAQ 310
           SV+T+  GV I GP+   Q  IL+P+A  FVA LHR+FN  RK + +
Sbjct: 3   SVETLLQGVTISGPIEEHQRKILTPQALSFVALLHRSFNQTRKNLLE 49

 Score = 42.0 bits (97), Expect(3) = e-172
 Identities = 22/53 (41%), Positives = 34/53 (63%)
 Frame = +2

Query: 1634 LLAQELDQLKSKMGAERFARSKYPLAAQLFQSTITGDAYSDFLTTLCYDHIVT 1792
            LL ++ D+L SK        +K+ LAAQ F + +TG+ Y+DFLT+L Y+ I +
Sbjct: 484  LLKEQTDELASKAPQG----NKFNLAAQYFATQVTGEDYADFLTSLLYNEITS 532

>sp|P28344|MASY_EMENI Malate synthase, glyoxysomal gi|101791|pir||S17773 malate synthase
            (EC 4.1.3.2) - Emericella nidulans
            gi|2702|emb|CAA39993.1| malate synthase [Emericella
            nidulans]
          Length = 528

 Score =  557 bits (1436), Expect(3) = e-168
 Identities = 274/413 (66%), Positives = 313/413 (75%)
 Frame = +1

Query: 394  PAGSAPRPHPAWWTRRVEITGPVDRKMVINALNSGATQYMADFEDSHAPTWDGNLEGQVN 573
            P+     P P    RRVEITGP DRKMV+NALNS             APTWD  + GQ+N
Sbjct: 77   PSWKGAPPAPGLVDRRVEITGPTDRKMVVNALNSDV-----------APTWDNMINGQIN 125

Query: 574  MRDAVRRAISYTGPNGKVYSLRTDGKLATLLVRPRGWHLVEAHFMVDGEPCSASLFDFGL 753
            + DA+RR + +     K Y LRTD  L TL+ R RGWHL E HF VDGEP S SLFDFGL
Sbjct: 126  LYDAIRRQVDFK-QGQKEYKLRTDRTLPTLIARARGWHLDEKHFTVDGEPISGSLFDFGL 184

Query: 754  FFFHNAAATLAAGQGPYFYLPKMESHLEARLWNDVFNASQDMLRLPRGTVRATVLIETLL 933
            +FFHNA   +A G GPYFYLPKMESHLEARLWNDVFN +QD + +PRGT+R TVLIET+ 
Sbjct: 185  YFFHNAKELVARGFGPYFYLPKMESHLEARLWNDVFNLAQDYIGMPRGTIRGTVLIETIT 244

Query: 934  AAFEMEEILYELRDHSSGLNCGRWDYIFSFIKKLRNHPQFVLPDRSAVTMTSPFMDAYVR 1113
            AAFEMEEI+YELRDHSSGLNCGRWDYIFSFIKK R HP FVLPDRS VTMT PFMDAYV+
Sbjct: 245  AAFEMEEIIYELRDHSSGLNCGRWDYIFSFIKKFRQHPNFVLPDRSDVTMTVPFMDAYVK 304

Query: 1114 LLIKTCHKRGVHAMGGMAAQIPIKDDPAANAAALAKVRGDKEREVVAGHDGTWVAHPALV 1293
            LLIKTCHKRGVHAMGGMAAQIPIKD+  AN  A+  VR DK REV AGHDGTWVAHPAL 
Sbjct: 305  LLIKTCHKRGVHAMGGMAAQIPIKDNAEANDKAMEGVRADKLREVRAGHDGTWVAHPALA 364

Query: 1294 PIAMEIFNKHMPTPNQLHVRRDDVTVTAHNLLDVRGGALLAEGGITEKGLRDNLSVGLAY 1473
             IA E+FNK+MPTPNQ+HVRR+DV +TA++LL+         G ITE G+R NL++GL+Y
Sbjct: 365  SIASEVFNKYMPTPNQMHVRREDVNITANDLLNTN-----VPGKITEDGIRKNLNIGLSY 419

Query: 1474 MENWLRGVGCVPIHNLMEDAATAEISRSAVWQWVRHHARTRDGRVVTAAWVKR 1632
            ME WLRGVGC+PI+ LMEDAATAE+SRS +WQW RH   T +G+ V  A+  R
Sbjct: 420  MEGWLRGVGCIPINYLMEDAATAEVSRSQLWQWARHGVTTSEGKKVDKAYALR 472

 Score = 68.2 bits (165), Expect = 8e-10
 Identities = 30/46 (65%), Positives = 36/46 (78%)
 Frame = +3

Query: 297 RELLKRRDERQKDLDAGRLPDFLPETAAVRADPGWKCAPPAPGLVD 434
           + LL+RR +RQ ++D G LPDFLPET  +R DP WK APPAPGLVD
Sbjct: 45  KALLQRRVDRQAEIDKGHLPDFLPETKHIRDDPSWKGAPPAPGLVD 90

 Score = 45.1 bits (105), Expect(3) = e-168
 Identities = 23/39 (58%), Positives = 27/39 (68%)
 Frame = +2

Query: 194 VAILGPVTAEQASILSPEAQLFVATLHRTFNPRRKGVAQ 310
           VAILG V+ E   IL+ EA  F+A LHRTFNP RK + Q
Sbjct: 11  VAILGSVSNEARKILTKEACAFLAILHRTFNPTRKALLQ 49

 Score = 36.2 bits (82), Expect(3) = e-168
 Identities = 20/51 (39%), Positives = 32/51 (62%)
 Frame = +2

Query: 1634 LLAQELDQLKSKMGAERFARSKYPLAAQLFQSTITGDAYSDFLTTLCYDHI 1786
            LL ++ D L +K G +    +K+ LA + F   +TG+ Y+DFLT+L Y+ I
Sbjct: 473  LLKEQADALAAK-GPKG---NKFQLAGRYFSGQVTGEDYADFLTSLLYNEI 519

>ref|ZP_00017596.1| hypothetical protein [Chloroflexus aurantiacus]
          Length = 507

 Score =  536 bits (1380), Expect(4) = e-162
 Identities = 264/404 (65%), Positives = 315/404 (77%), Gaps = 1/404 (0%)
 Frame = +1

Query: 406  APRPHPAWWTRRVEITGPVDRKMVINALNSGATQYMADFEDSHAPTWDGNLEGQVNMRDA 585
            AP P P    RRVEITGPVDRKM+INALNSGA  +MADFED++ PTW   +EGQ+N+RDA
Sbjct: 55   APIP-PQIQDRRVEITGPVDRKMIINALNSGAKVFMADFEDANTPTWQNQVEGQINLRDA 113

Query: 586  VRRAISYTGPNGKVYSLRTDGKLATLLVRPRGWHLVEAHFMVDGEPCSASLFDFGLFFFH 765
            +RR I+YT P GK Y+L  +   A L VRPRGWHL E H +VDGEP S ++FDFGL+FFH
Sbjct: 114  LRRTITYTSPEGKHYALNNNP--AILFVRPRGWHLNEKHMLVDGEPISGAIFDFGLYFFH 171

Query: 766  NAAATLAAGQGPYFYLPKMESHLEARLWNDVFNASQDMLRLPRGTVRATVLIETLLAAFE 945
            NA   +    GPYFYLPKMESHLEARLWND+F  +Q++  +P+GT++ATVLIET+LAAFE
Sbjct: 172  NAQTAIDVQGGPYFYLPKMESHLEARLWNDIFVLAQELRGIPQGTIKATVLIETILAAFE 231

Query: 946  MEEILYELRDHSSGLNCGRWDYIFSFIKKLRNHPQFVLPDRSAVTMTSPFMDAYVRLLIK 1125
            M+EILYELR+HS+GLNCGRWDYIFS IKK RN P F L DR+ VTMT+ FM +Y  L IK
Sbjct: 232  MDEILYELRNHSAGLNCGRWDYIFSCIKKFRNDPNFCLADRALVTMTTHFMRSYSLLAIK 291

Query: 1126 TCHKRGVHAMGGMAAQIPIKDDPAANAAALAKVRGDKEREVVAGHDGTWVAHPALVPIAM 1305
            TCH+RG HAMGGMAAQIPIK+DP AN AALAKVR DKERE   GHDGTWVAHP LVP+AM
Sbjct: 292  TCHRRGAHAMGGMAAQIPIKNDPVANEAALAKVRADKEREASDGHDGTWVAHPGLVPVAM 351

Query: 1306 EIFNKHMPTPNQLHVRRDDVTVTAHNLLDVRGGALLAEGGITEKGLRDNLSVGLAYMENW 1485
            E+F++ MPTPNQ++ +RDDV VTA +LL     A   E  ITE+G+R N++VG+ Y+  W
Sbjct: 352  EVFDRLMPTPNQINRQRDDVQVTAADLL-----AFGPEKPITEQGMRLNINVGIQYLGAW 406

Query: 1486 LRGVGCVPIHNLMEDAATAEISRSAVWQWVRH-HARTRDGRVVT 1614
            L G GCVP+ NLMEDAATAEISR+ +WQW+R       DGR VT
Sbjct: 407  LAGNGCVPVFNLMEDAATAEISRAQIWQWIRSPKGVLEDGRKVT 450

 Score = 48.9 bits (115), Expect(4) = e-162
 Identities = 25/45 (55%), Positives = 30/45 (66%)
 Frame = +3

Query: 300 ELLKRRDERQKDLDAGRLPDFLPETAAVRADPGWKCAPPAPGLVD 434
           ELL RR ERQ+ +DAG  PDFLPETA +R +  W  AP  P + D
Sbjct: 20  ELLARRAERQRAIDAGERPDFLPETAHIR-ESEWTIAPIPPQIQD 63

 Score = 29.3 bits (64), Expect(4) = e-162
 Identities = 13/18 (72%), Positives = 14/18 (77%)
 Frame = +2

Query: 242 PEAQLFVATLHRTFNPRR 295
           PEA  F+ATLHR FN RR
Sbjct: 1   PEALEFLATLHRRFNTRR 18

 Score = 28.5 bits (62), Expect(4) = e-162
 Identities = 15/51 (29%), Positives = 27/51 (52%)
 Frame = +2

Query: 1634 LLAQELDQLKSKMGAERFARSKYPLAAQLFQSTITGDAYSDFLTTLCYDHI 1786
            +L +EL +++  +G   +   +Y  AA+LF    T   + +FLT   Y+ I
Sbjct: 457  MLPEELHKVREILGPA-YEDGRYEEAAELFDEITTDPEFVEFLTLPAYERI 506

>ref|NP_285600.1| malate synthase [Deinococcus radiodurans] gi|7473114|pir||D75581
            malate synthase - Deinococcus radiodurans (strain R1)
            gi|6460775|gb|AAF12480.1|AE001863_105 malate synthase
            [Deinococcus radiodurans]
          Length = 521

 Score =  504 bits (1299), Expect(4) = e-159
 Identities = 247/393 (62%), Positives = 300/393 (75%), Gaps = 1/393 (0%)
 Frame = +1

Query: 436  RRVEITGPVDRKMVINALNSGATQYMADFEDSHAPTWDGNLEGQVNMRDAVRRAISYTGP 615
            RRVEITGPVDRKM+INALNSGA  +MADFED+ +PTWD  ++GQ+N+RDAVR  IS    
Sbjct: 89   RRVEITGPVDRKMIINALNSGAKMFMADFEDASSPTWDNCVQGQINLRDAVRGTISLE-Q 147

Query: 616  NGKVYSLRTDGKLATLLVRPRGWHLVEAHFMVDGEPCSASLFDFGLFFFHNAAATLAAGQ 795
            NGK Y L  +   ATLLVRPRGWHL E H  VDGE    + FDFGLFFFHNA   LA G+
Sbjct: 148  NGKSYKL--NDTTATLLVRPRGWHLPEKHVQVDGETLYGAFFDFGLFFFHNAKEQLARGK 205

Query: 796  GPYFYLPKMESHLEARLWNDVFNASQDMLRLPRGTVRATVLIETLLAAFEMEEILYELRD 975
            GPYFYLPKMESHLEARLWNDVFN ++D +++PRG++RATVLIET++AAFEM+EILYELR+
Sbjct: 206  GPYFYLPKMESHLEARLWNDVFNYAEDTIQIPRGSIRATVLIETIVAAFEMDEILYELRE 265

Query: 976  HSSGLNCGRWDYIFSFIKKLRNHPQFVLPDRSAVTMTSPFMDAYVRLLIKTCHKRGVHAM 1155
            HS+GLNCGRWDYIFS+IKKLRNH   VLPDR+ VTM  P M  Y +L I+TCHKRG  A+
Sbjct: 266  HSAGLNCGRWDYIFSYIKKLRNHSDRVLPDRAKVTMAVPMMQNYSKLAIQTCHKRGAPAI 325

Query: 1156 GGMAAQIPIKDDPAANAAALAKVRGDKEREVVAGHDGTWVAHPALVPIAMEIFNKHMPTP 1335
            GGM+A IP+K D   NAAA  +VR DKERE   GHDGTWVAHP +V +A E+F++ MP P
Sbjct: 326  GGMSAFIPVKGDEEKNAAAFEQVRVDKEREATNGHDGTWVAHPGMVQLATEVFDRIMPQP 385

Query: 1336 NQL-HVRRDDVTVTAHNLLDVRGGALLAEGGITEKGLRDNLSVGLAYMENWLRGVGCVPI 1512
            NQ+   ++ D ++TA +LL         EG +TE G+R N++VG+ Y+  WLRG G VPI
Sbjct: 386  NQIGSDKQKDFSLTATDLLQA------PEGSVTEAGVRTNINVGIQYLAAWLRGSGAVPI 439

Query: 1513 HNLMEDAATAEISRSAVWQWVRHHARTRDGRVV 1611
            HNLMEDAATAEISR+ +WQW++      DGR +
Sbjct: 440  HNLMEDAATAEISRAQLWQWLKQGVTLEDGRTL 472

 Score = 55.1 bits (131), Expect(4) = e-159
 Identities = 27/46 (58%), Positives = 34/46 (73%)
 Frame = +3

Query: 297 RELLKRRDERQKDLDAGRLPDFLPETAAVRADPGWKCAPPAPGLVD 434
           REL+++R+ERQ+ LDAG LPDFLPETA +RA   WK +P    L D
Sbjct: 44  RELMQKREERQQRLDAGELPDFLPETAEIRAG-DWKISPLPDALKD 88

 Score = 44.3 bits (103), Expect(4) = e-159
 Identities = 21/40 (52%), Positives = 26/40 (64%)
 Frame = +2

Query: 191 GVAILGPVTAEQASILSPEAQLFVATLHRTFNPRRKGVAQ 310
           G+ I  P+  E A IL+PEA  FVA LHR F PRR+ + Q
Sbjct: 9   GMTINAPIKPEYAEILTPEALAFVAELHRRFEPRRRELMQ 48

 Score = 27.7 bits (60), Expect(4) = e-159
 Identities = 19/53 (35%), Positives = 26/53 (48%)
 Frame = +2

Query: 1628 NDLLAQELDQLKSKMGAERFARSKYPLAAQLFQSTITGDAYSDFLTTLCYDHI 1786
            + L  +E D    K+GAE      +  A+ LF+ T TGD   DFLT   Y  +
Sbjct: 478  DQLYTEETD----KLGAE------FADASALFKQTATGDTLVDFLTLPGYQQL 520



EST assemble image


clone accession position
1 HCL080f02_r AV644031 1 561
2 HCL052h06_r AV642500 27 648
3 HCL082a03_r AV644107 31 657
4 HCL079g04_r AV643990 60 640
5 HCL026h09_r AV641052 72 636
6 HCL060c04_r AV642905 79 594
7 HCL068d03_r AV643362 80 557
8 HCL024h11_r AV640934 80 439
9 HCL002c10_r AV639642 82 654
10 HCL041d12_r AV641858 82 617
11 MX248c09_r BP092009 82 584
12 HCL100b10_r AV645247 82 578
13 HCL006e02_r AV639872 82 274
14 LCL099g11_r AV631784 85 617
15 LCL015e04_r AV626793 85 617
16 HCL063d03_r AV643078 85 593
17 LCL009a03_r AV626436 85 645
18 HCL041g02_r AV641876 85 647
19 HCL009c11_r AV640044 85 362
20 HCL016g03_r AV640463 85 358
21 HCL066e04_r AV643261 85 568
22 HCL029h06_r AV641213 85 490
23 CL58g05_r AV396225 85 651
24 HCL013f09_r AV640283 85 557
25 HCL072b09_r AV643580 85 604
26 HCL060c11_r AV642910 85 642
27 HCL069a11_r AV643401 85 603
28 HCL095c09_r AV644900 86 576
29 HCL098h08_r AV645156 88 495
30 MXL044d08_r BP095600 88 477
31 LCL001h06_r AV626066 90 618
32 HCL058h08_r AV642832 90 603
33 LCL094f06_r AV631473 90 386
34 CL43a02_r AV395517 90 630
35 HCL053f09_r AV642543 90 643
36 LCL098g10_r AV631725 90 603
37 HCL090a12_r AV644528 90 358
38 LCL053b02_r AV629150 90 578
39 HCL043b06_r AV641963 90 617
40 HCL079d12_r AV643973 90 561
41 HCL004h02_r AV639776 90 356
42 HCL077b07_r AV643851 90 628
43 LCL027g04_r AV627505 90 617
44 HCL025g12_r AV640990 91 557
45 HCL073a01_r AV643623 92 559
46 HCL086f10_r AV644339 93 651
47 HCL042h02_r AV641943 93 557
48 HCL033a09_r AV641407 96 501
49 HCL029a09_r AV641170 97 593
50 MXL016h01_r BP094004 97 454
51 LCL070h08_r AV630009 100 556
52 HCL083a02_r AV644152 102 599
53 HCL098f03_r AV645130 112 475
54 HCL006h07_r AV639901 112 536
55 LCL039d06_r AV628270 114 645
56 HCL095b05_r AV644888 115 530
57 LCL078a11_r AV630382 118 358
58 LCL004e02_r AV626217 124 390
59 MXL058f09_r BP096435 130 547
60 LCL069h08_r AV629955 135 557
61 MXL023e12_r BP094471 136 465
62 HCL042c04_r AV641906 136 572
63 HCL055b03_r AV642633 136 654
64 LCL023a11_r AV627228 138 357
65 HCL088a01_r AV644406 142 653
66 LCL090f07_r AV631235 145 557
67 HCL008c02_r AV639978 162 715
68 HCL019e12_r AV640634 162 454
69 HCL048h11_r AV642281 169 655
70 HCL001h05_r AV639611 172 468
71 LCL031d03_r AV627740 179 573
72 MX253f12_r BP092403 183 586
73 MXL041e03_r BP095419 198 613
74 LCL037h02_r AV628177 210 724
75 MXL097h12_r BP098720 243 716
76 MXL030c07_r BP094816 264 466
77 HCL003c06_r AV639697 264 379
78 LCL021e08_r AV627127 289 559
79 CL17f02_r AV394145 294 831
80 HC094b06_r AV639033 315 691
81 MXL085g02_r BP098037 544 1034
82 HC034f04_r AV634531 600 1079
83 MX251c05_r BP092221 806 1146
84 LCL090h10_r AV631251 834 1289
85 MXL034a08_r BP094993 860 1218
86 HC039f06_r AV634916 1023 1552
87 CM001e12_r AV386491 1071 1620
88 CM009e05_r AV397660 1427 2066
89 MX220g12_r BP090232 1429 1761
90 CM052c09_r AV390511 1583 2154
91 HC027e11_r AV633972 1583 2085
92 HC014d10_r AV632924 1600 2054
93 CM018b07_r AV387243 1612 2159
94 HCL036d12_r AV641567 1759 2216
95 MX246g09_r BP091942 1763 2251
96 HC023b09_r AV633628 2068 2514
97 MX066g01_r BP088696 2088 2346
98 CL03g08_r AV393430 2159 2672
99 LC048g12_r AV622375 2226 2732
100 MX210g02_r BP089617 2325 2695
101 CM069h06_r AV391176 2380 2956
102 MXL098b12_r BP098734 2434 2761




Chlamydomonas reinhardtii
Kazusa DNA Research Institute