Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC000042A_C03 KCC000042A_c03
(871 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|Q9ZNS1|RS7_AVIMR 40S ribosomal protein S7 gi|3851636|gb|AAC97... 196 1e-54
gb|AAD26256.1|AF118149_1 ribosomal protein S7 [Secale cereale] 197 2e-54
gb|AAN04468.1| ribosomal protein S7 [Oryza sativa (japonica cult... 196 7e-54
ref|NP_175314.1| 40S ribosomal protein S7 (RPS7A) [Arabidopsis t... 195 2e-53
emb|CAC44242.1| Ribosomal protein S7 [Hordeum vulgare subsp. vul... 192 3e-53
>sp|Q9ZNS1|RS7_AVIMR 40S ribosomal protein S7 gi|3851636|gb|AAC97947.1| unknown
[Avicennia marina] gi|4128206|gb|AAD03501.1| 40S
ribosome protein S7 [Avicennia marina]
Length = 190
Score = 196 bits (499), Expect(3) = 1e-54
Identities = 92/132 (69%), Positives = 111/132 (83%)
Frame = +1
Query: 388 RAIIIHVPYRLLKAFHKIQQRLVRELEKKFSGRDVVIVGNRRILPPPRNGKTASRPRSRT 567
+A++IHVPYRL K+F KI RLVRELEKKFSG++VV++ RRIL PP+ G RPRSRT
Sbjct: 59 KAVVIHVPYRLRKSFRKIHPRLVRELEKKFSGKEVVLIATRRILRPPKKGSAVQRPRSRT 118
Query: 568 LTAVHDAILDDLVYPTEIVGKRIRYRLDGSKILKVHLDPKDRNSTEYKLETFGSVYKRLT 747
LTAVHDA+L+D+VYP EIVGKR+RYRLDGSKI+KV LDPK +N TE KLETF VY++L+
Sbjct: 119 LTAVHDAMLEDIVYPAEIVGKRVRYRLDGSKIMKVFLDPKAKNDTENKLETFAGVYRKLS 178
Query: 748 GKDVSFEFPVAE 783
GKDV FEFP+ E
Sbjct: 179 GKDVVFEFPLTE 190
Score = 30.4 bits (67), Expect(3) = 1e-54
Identities = 13/19 (68%), Positives = 16/19 (83%)
Frame = +2
Query: 299 EATNAELKADLRDLYITSA 355
E TN E+K+DL+DLYI SA
Sbjct: 31 ENTNQEIKSDLKDLYINSA 49
Score = 30.4 bits (67), Expect(3) = 1e-54
Identities = 14/22 (63%), Positives = 17/22 (76%)
Frame = +3
Query: 222 KKIVKERGQEPDEFEEQVAQAL 287
+KI K++ EP EFEE VAQAL
Sbjct: 6 QKIHKDKDAEPTEFEENVAQAL 27
>gb|AAD26256.1|AF118149_1 ribosomal protein S7 [Secale cereale]
Length = 192
Score = 197 bits (500), Expect(3) = 2e-54
Identities = 92/134 (68%), Positives = 114/134 (84%)
Frame = +1
Query: 388 RAIIIHVPYRLLKAFHKIQQRLVRELEKKFSGRDVVIVGNRRILPPPRNGKTASRPRSRT 567
+A++IHVPYRL K F KI RLVRELEKKFSG+DVVIV RRI+ PP+ G RPR+RT
Sbjct: 59 KAVVIHVPYRLRKNFRKIHVRLVRELEKKFSGKDVVIVATRRIVRPPKKGSAVVRPRTRT 118
Query: 568 LTAVHDAILDDLVYPTEIVGKRIRYRLDGSKILKVHLDPKDRNSTEYKLETFGSVYKRLT 747
LTAVHD +L+D+VYP EIVGKR+RYRLDGSKI+K+ LDP +RN+TEYKL+TF +VY+RL
Sbjct: 119 LTAVHDGLLEDVVYPAEIVGKRVRYRLDGSKIIKIFLDPMERNNTEYKLDTFTAVYRRLC 178
Query: 748 GKDVSFEFPVAESS 789
GKDV +E+PVAE++
Sbjct: 179 GKDVVYEYPVAETA 192
Score = 32.0 bits (71), Expect(3) = 2e-54
Identities = 14/21 (66%), Positives = 17/21 (80%)
Frame = +3
Query: 222 KKIVKERGQEPDEFEEQVAQA 284
KKI K++G EP EFE+ VAQA
Sbjct: 6 KKIQKDKGLEPSEFEDTVAQA 26
Score = 27.7 bits (60), Expect(3) = 2e-54
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = +2
Query: 296 LEATNAELKADLRDLYITSA 355
LE N ELK+D++DLYI +A
Sbjct: 30 LENGNQELKSDVKDLYINAA 49
>gb|AAN04468.1| ribosomal protein S7 [Oryza sativa (japonica cultivar-group)]
Length = 192
Score = 196 bits (497), Expect(3) = 7e-54
Identities = 91/134 (67%), Positives = 113/134 (83%)
Frame = +1
Query: 388 RAIIIHVPYRLLKAFHKIQQRLVRELEKKFSGRDVVIVGNRRILPPPRNGKTASRPRSRT 567
+A+IIHVPYRL KA+ KI RLVRELEKKFSG+DVV+V RRI+ PP+ G RPR+RT
Sbjct: 59 KAVIIHVPYRLRKAYKKIHVRLVRELEKKFSGKDVVLVATRRIVRPPKKGSAVVRPRTRT 118
Query: 568 LTAVHDAILDDLVYPTEIVGKRIRYRLDGSKILKVHLDPKDRNSTEYKLETFGSVYKRLT 747
LTAVHD IL+D+VYP EIVGKR+RY LDG KI+K+ LDPK+RN+TEYKL+TF SVY+RL
Sbjct: 119 LTAVHDGILEDVVYPAEIVGKRVRYHLDGRKIMKIFLDPKERNNTEYKLDTFSSVYRRLC 178
Query: 748 GKDVSFEFPVAESS 789
GKDV F++P+ E++
Sbjct: 179 GKDVVFDYPMTETA 192
Score = 30.4 bits (67), Expect(3) = 7e-54
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = +3
Query: 222 KKIVKERGQEPDEFEEQVAQA 284
+KI K++G EP EFE+ VAQA
Sbjct: 6 RKIQKDKGLEPTEFEDTVAQA 26
Score = 28.5 bits (62), Expect(3) = 7e-54
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = +2
Query: 296 LEATNAELKADLRDLYITSA 355
LE N ELK+DL+DLYI A
Sbjct: 30 LENGNQELKSDLKDLYINGA 49
>ref|NP_175314.1| 40S ribosomal protein S7 (RPS7A) [Arabidopsis thaliana]
gi|30694420|ref|NP_849786.1| 40S ribosomal protein S7
(RPS7A) [Arabidopsis thaliana] gi|25294579|pir||A96526
probable 40S ribosomal protein S7 homolog, [imported] -
Arabidopsis thaliana
gi|12321110|gb|AAG50658.1|AC084242_2 40S ribosomal
protein S7 homolog, putative [Arabidopsis thaliana]
gi|12597817|gb|AAG60128.1|AC073555_12 40S ribosomal
protein S7 homolog, putative [Arabidopsis thaliana]
gi|15724216|gb|AAL06501.1|AF412048_1 At1g48830/T24P22_5
[Arabidopsis thaliana] gi|18252255|gb|AAL62008.1|
At1g48830/T24P22_5 [Arabidopsis thaliana]
gi|21555683|gb|AAM63913.1| 40S ribosomal protein S7
homolog, putative [Arabidopsis thaliana]
Length = 191
Score = 195 bits (496), Expect(3) = 2e-53
Identities = 90/133 (67%), Positives = 114/133 (85%)
Frame = +1
Query: 388 RAIIIHVPYRLLKAFHKIQQRLVRELEKKFSGRDVVIVGNRRILPPPRNGKTASRPRSRT 567
+AI+++VPYRL KA+ KI RLVRELEKKFSG+DV+++ RRI+ PP+ G A RPR+RT
Sbjct: 59 KAIVVNVPYRLRKAYRKIHVRLVRELEKKFSGKDVILIATRRIVRPPKKGSAAKRPRNRT 118
Query: 568 LTAVHDAILDDLVYPTEIVGKRIRYRLDGSKILKVHLDPKDRNSTEYKLETFGSVYKRLT 747
LT+VH+AILDD+V P EIVGKR RYRLDG+KI+KV LDPK+RN+TEYK+E F +VYK+LT
Sbjct: 119 LTSVHEAILDDVVLPAEIVGKRTRYRLDGTKIMKVFLDPKERNNTEYKVEAFSAVYKKLT 178
Query: 748 GKDVSFEFPVAES 786
GKDV FEFP+ E+
Sbjct: 179 GKDVVFEFPITEA 191
Score = 30.8 bits (68), Expect(3) = 2e-53
Identities = 13/20 (65%), Positives = 17/20 (85%)
Frame = +2
Query: 296 LEATNAELKADLRDLYITSA 355
LE TN ELK++L+DLY+ SA
Sbjct: 30 LENTNQELKSELKDLYVNSA 49
Score = 26.9 bits (58), Expect(3) = 2e-53
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = +3
Query: 225 KIVKERGQEPDEFEEQVAQA 284
KI KE+G E E +EQVAQA
Sbjct: 7 KIHKEKGVELSELDEQVAQA 26
>emb|CAC44242.1| Ribosomal protein S7 [Hordeum vulgare subsp. vulgare]
Length = 191
Score = 192 bits (487), Expect(3) = 3e-53
Identities = 90/134 (67%), Positives = 113/134 (84%)
Frame = +1
Query: 388 RAIIIHVPYRLLKAFHKIQQRLVRELEKKFSGRDVVIVGNRRILPPPRNGKTASRPRSRT 567
+A++IHVPYRL K F KI RLVRELE+ SG+DVV V RRI+ PP+ G RPR+RT
Sbjct: 59 KAVVIHVPYRLRKPFRKIHVRLVRELER-VSGKDVVFVATRRIVRPPKKGSAVQRPRTRT 117
Query: 568 LTAVHDAILDDLVYPTEIVGKRIRYRLDGSKILKVHLDPKDRNSTEYKLETFGSVYKRLT 747
LTAVHD IL+D+VYP EIVGKR+RYRLDG+K++K++LDPK+RN+TEYKLETF +VY+RL
Sbjct: 118 LTAVHDGILEDVVYPAEIVGKRVRYRLDGAKVIKIYLDPKERNNTEYKLETFSAVYRRLC 177
Query: 748 GKDVSFEFPVAESS 789
GKDV FE+PVAE++
Sbjct: 178 GKDVVFEYPVAETA 191
Score = 32.0 bits (71), Expect(3) = 3e-53
Identities = 14/21 (66%), Positives = 17/21 (80%)
Frame = +3
Query: 222 KKIVKERGQEPDEFEEQVAQA 284
KKI K++G EP EFE+ VAQA
Sbjct: 6 KKIQKDKGVEPSEFEDTVAQA 26
Score = 28.9 bits (63), Expect(3) = 3e-53
Identities = 13/20 (65%), Positives = 16/20 (80%)
Frame = +2
Query: 296 LEATNAELKADLRDLYITSA 355
LE N ELK+DL+DLYI +A
Sbjct: 30 LENGNQELKSDLKDLYINTA 49
