Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC000022A_C01 KCC000022A_c01
(714 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||JH0226 ubiquitin / ribosomal protein S27a.1 - barley gi|167... 121 1e-31
dbj|BAB39294.1| ubiquitin / ribosomal protein S27a [Oryza sativa... 121 1e-31
pir||JH0227 ubiquitin / ribosomal protein S27a.2 - barley gi|167... 121 1e-31
gb|AAA70104.1| ubiquitin fusion protein gi|1589387|prf||2211240A... 117 1e-30
pir||JS0657 ubiquitin / ribosomal protein S27a - maize gi|168651... 116 3e-30
>pir||JH0226 ubiquitin / ribosomal protein S27a.1 - barley
gi|167073|gb|AAA62698.1| ubiquitin
Length = 155
Score = 121 bits (304), Expect(2) = 1e-31
Identities = 58/85 (68%), Positives = 66/85 (77%), Gaps = 2/85 (2%)
Frame = +2
Query: 215 VSDDSTLMCLLRLLGGAKKRKKKTYTKPKKQKHKHKKIKLRVLKFYKVD*LLARSSACCK 394
+ +STL +LRL GGAKKRKKKTYTKPKKQKHKHKK+KL VL+FYKVD + + K
Sbjct: 61 IQKESTLHLVLRLRGGAKKRKKKTYTKPKKQKHKHKKVKLAVLQFYKVDDATGKVTRLRK 120
Query: 395 QCPN--CGPGTFMATHFDRVYCGKC 463
+CPN CG GTFMA HFDR YCGKC
Sbjct: 121 ECPNADCGAGTFMANHFDRHYCGKC 145
Score = 37.7 bits (86), Expect(2) = 1e-31
Identities = 20/51 (39%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Frame = +3
Query: 57 LTGLT-SLR*VLAQTVADVKAAVEALQGLEAGEQRILFNGVQLEDSQVLAE 206
LTG T +L + T+ +VKA ++ +G+ +QR++F G QLED + LA+
Sbjct: 8 LTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAD 58
>dbj|BAB39294.1| ubiquitin / ribosomal protein S27a [Oryza sativa (japonica
cultivar-group)]
Length = 155
Score = 121 bits (304), Expect(2) = 1e-31
Identities = 58/85 (68%), Positives = 66/85 (77%), Gaps = 2/85 (2%)
Frame = +2
Query: 215 VSDDSTLMCLLRLLGGAKKRKKKTYTKPKKQKHKHKKIKLRVLKFYKVD*LLARSSACCK 394
+ +STL +LRL GGAKKRKKKTYTKPKKQKHKHKK+KL VL+FYKVD + + K
Sbjct: 61 IQKESTLHLVLRLRGGAKKRKKKTYTKPKKQKHKHKKVKLAVLQFYKVDDATGKVTRLRK 120
Query: 395 QCPN--CGPGTFMATHFDRVYCGKC 463
+CPN CG GTFMA HFDR YCGKC
Sbjct: 121 ECPNAECGAGTFMANHFDRHYCGKC 145
Score = 37.7 bits (86), Expect(2) = 1e-31
Identities = 20/51 (39%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Frame = +3
Query: 57 LTGLT-SLR*VLAQTVADVKAAVEALQGLEAGEQRILFNGVQLEDSQVLAE 206
LTG T +L + T+ +VKA ++ +G+ +QR++F G QLED + LA+
Sbjct: 8 LTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAD 58
>pir||JH0227 ubiquitin / ribosomal protein S27a.2 - barley
gi|167075|gb|AAA62699.1| ubiquitin
Length = 155
Score = 121 bits (303), Expect(2) = 1e-31
Identities = 58/85 (68%), Positives = 66/85 (77%), Gaps = 2/85 (2%)
Frame = +2
Query: 215 VSDDSTLMCLLRLLGGAKKRKKKTYTKPKKQKHKHKKIKLRVLKFYKVD*LLARSSACCK 394
+ +STL +LRL GGAKKRKKKTYTKPKKQKHKHKK+KL VL+FYKVD + + K
Sbjct: 61 IQKESTLHLVLRLRGGAKKRKKKTYTKPKKQKHKHKKVKLAVLQFYKVDDSTGKVTRLRK 120
Query: 395 QCPN--CGPGTFMATHFDRVYCGKC 463
+CPN CG GTFMA HFDR YCGKC
Sbjct: 121 ECPNADCGAGTFMANHFDRHYCGKC 145
Score = 37.7 bits (86), Expect(2) = 1e-31
Identities = 20/51 (39%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Frame = +3
Query: 57 LTGLT-SLR*VLAQTVADVKAAVEALQGLEAGEQRILFNGVQLEDSQVLAE 206
LTG T +L + T+ +VKA ++ +G+ +QR++F G QLED + LA+
Sbjct: 8 LTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAD 58
>gb|AAA70104.1| ubiquitin fusion protein gi|1589387|prf||2211240A ubiquitin fusion
protein
Length = 155
Score = 117 bits (294), Expect(2) = 1e-30
Identities = 56/85 (65%), Positives = 65/85 (75%), Gaps = 2/85 (2%)
Frame = +2
Query: 215 VSDDSTLMCLLRLLGGAKKRKKKTYTKPKKQKHKHKKIKLRVLKFYKVD*LLARSSACCK 394
+ +STL +LRL GGAKKRKKKTYTKPKK KHKHKK+KL VL+FYKVD ++ + K
Sbjct: 61 IQKESTLHLVLRLRGGAKKRKKKTYTKPKKTKHKHKKVKLSVLQFYKVDDTTSKVTRLRK 120
Query: 395 QCPN--CGPGTFMATHFDRVYCGKC 463
+CPN CG G FMA HFDR YCGKC
Sbjct: 121 ECPNSECGAGVFMANHFDRHYCGKC 145
Score = 37.7 bits (86), Expect(2) = 1e-30
Identities = 20/51 (39%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Frame = +3
Query: 57 LTGLT-SLR*VLAQTVADVKAAVEALQGLEAGEQRILFNGVQLEDSQVLAE 206
LTG T +L + T+ +VKA ++ +G+ +QR++F G QLED + LA+
Sbjct: 8 LTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAD 58
>pir||JS0657 ubiquitin / ribosomal protein S27a - maize gi|168651|gb|AAA33519.1|
ubiquitin fusion protein gi|902527|gb|AAA70105.1|
ubiquitin fusion protein gi|1589388|prf||2211240B
ubiquitin fusion protein
Length = 155
Score = 116 bits (291), Expect(2) = 3e-30
Identities = 56/85 (65%), Positives = 64/85 (74%), Gaps = 2/85 (2%)
Frame = +2
Query: 215 VSDDSTLMCLLRLLGGAKKRKKKTYTKPKKQKHKHKKIKLRVLKFYKVD*LLARSSACCK 394
+ +STL +LRL GGAKKRKKKTYTKPKK KHKHKK+KL VL+FYKVD + + K
Sbjct: 61 IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKHKKVKLAVLQFYKVDDATGKVTRLRK 120
Query: 395 QCPN--CGPGTFMATHFDRVYCGKC 463
+CPN CG G FMA HFDR YCGKC
Sbjct: 121 ECPNTECGAGVFMANHFDRHYCGKC 145
Score = 37.7 bits (86), Expect(2) = 3e-30
Identities = 20/51 (39%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Frame = +3
Query: 57 LTGLT-SLR*VLAQTVADVKAAVEALQGLEAGEQRILFNGVQLEDSQVLAE 206
LTG T +L + T+ +VKA ++ +G+ +QR++F G QLED + LA+
Sbjct: 8 LTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAD 58
