Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC000014A_C01 KCC000014A_c01
(642 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAB93181.1| putative 40S ribosomal protein S26 [Oryza sativa... 139 3e-32
pir||T50822 ribosomal protein S26, cytosolic [imported] - garden... 139 5e-32
ref|NP_181583.1| 40S ribosomal protein S26 (RPS26A) [Arabidopsis... 135 7e-31
sp|P49216|RS26_ORYSA 40S RIBOSOMAL PROTEIN S26 (S31) gi|7440567|... 135 7e-31
ref|NP_181591.1| 40S ribosomal protein S26 (RPS26B) [Arabidopsis... 134 9e-31
>dbj|BAB93181.1| putative 40S ribosomal protein S26 [Oryza sativa (japonica
cultivar-group)]
Length = 133
Score = 139 bits (351), Expect = 3e-32
Identities = 72/136 (52%), Positives = 91/136 (65%)
Frame = +3
Query: 6 MTKKRRNRGRAKHGRGHVNRVRCESSGAMVPKDKAIKRYIVRNIVDASALRDMQEACVVD 185
MT KRRN GR KHGRGHV +RC + PKDKAIKR+ VRNIV+ +A+RD+QEACV D
Sbjct: 1 MTFKRRNGGRNKHGRGHVKYIRCSNCAKCCPKDKAIKRFQVRNIVEQAAIRDVQEACVHD 60
Query: 186 NYALPKIYRKVYYSISAAIHSRVVRVRNAKERRNREPPRRFPNRDQQQQKKD*AGGQ*DR 365
Y LPK+Y KV++ +S AIH+ +VRVR+ + RR+R PP RF R+ + Q GG
Sbjct: 61 GYVLPKLYAKVHHCVSCAIHAHIVRVRSRENRRDRRPPERFRRREDRPQGPRPGGG---A 117
Query: 366 GASGLAAVGATAAARS 413
A G AA A AR+
Sbjct: 118 PAPGGAAAPAPNVART 133
>pir||T50822 ribosomal protein S26, cytosolic [imported] - garden pea
gi|5706704|gb|AAD47346.1|AF112440_1 ribosomal protein
S26 [Pisum sativum]
Length = 130
Score = 139 bits (349), Expect = 5e-32
Identities = 65/104 (62%), Positives = 80/104 (76%)
Frame = +3
Query: 6 MTKKRRNRGRAKHGRGHVNRVRCESSGAMVPKDKAIKRYIVRNIVDASALRDMQEACVVD 185
MT KRRN GR KHGRGHV +RC + G PKDKAIKR++VRNIV+ +A+RD+QEACV D
Sbjct: 1 MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYD 60
Query: 186 NYALPKIYRKVYYSISAAIHSRVVRVRNAKERRNREPPRRFPNR 317
Y LPK+Y K+ Y +S AIHS VVRVR+ +RR R+PP+RF R
Sbjct: 61 QYTLPKLYVKMQYCVSCAIHSHVVRVRSRTDRRKRDPPQRFIRR 104
>ref|NP_181583.1| 40S ribosomal protein S26 (RPS26A) [Arabidopsis thaliana]
gi|25294902|pir||D84830 40S ribosomal protein S26
[imported] - Arabidopsis thaliana
gi|2651314|gb|AAB87594.1| 40S ribosomal protein S26
[Arabidopsis thaliana] gi|21555493|gb|AAM63871.1| 40S
ribosomal protein S26 [Arabidopsis thaliana]
Length = 133
Score = 135 bits (339), Expect = 7e-31
Identities = 70/130 (53%), Positives = 82/130 (62%)
Frame = +3
Query: 6 MTKKRRNRGRAKHGRGHVNRVRCESSGAMVPKDKAIKRYIVRNIVDASALRDMQEACVVD 185
MT KRRN GR KH RGHVN +RC + G PKDKAIKR+IVRNIV+ +A+RD+QEA V +
Sbjct: 1 MTFKRRNGGRNKHNRGHVNPIRCSNCGKCCPKDKAIKRFIVRNIVEQAAIRDVQEASVYE 60
Query: 186 NYALPKIYRKVYYSISAAIHSRVVRVRNAKERRNREPPRRFPNRDQQQQKKD*AGGQ*DR 365
Y LPK+Y K Y +S AIHS VVRVR+ RR R PP RF R + K G
Sbjct: 61 GYTLPKLYAKTQYCVSCAIHSHVVRVRSRTNRRVRTPPPRFARRKEDTPKPGQPGQAPRP 120
Query: 366 GASGLAAVGA 395
G AA A
Sbjct: 121 AGPGAAAAAA 130
>sp|P49216|RS26_ORYSA 40S RIBOSOMAL PROTEIN S26 (S31) gi|7440567|pir||T04081 probable
ribosomal protein S31 [imported] - rice
gi|971284|dbj|BAA07208.1| ribosomal protein S31 [Oryza
sativa (japonica cultivar-group)]
Length = 133
Score = 135 bits (339), Expect = 7e-31
Identities = 70/136 (51%), Positives = 88/136 (64%)
Frame = +3
Query: 6 MTKKRRNRGRAKHGRGHVNRVRCESSGAMVPKDKAIKRYIVRNIVDASALRDMQEACVVD 185
M KRRN GR KHGRGHV +RC + PKDKAIKR+ VRNIV+ A+RD+QE CV D
Sbjct: 1 MIFKRRNGGRIKHGRGHVKYIRCSNCAKCCPKDKAIKRFQVRNIVEQVAIRDVQEGCVHD 60
Query: 186 NYALPKIYRKVYYSISAAIHSRVVRVRNAKERRNREPPRRFPNRDQQQQKKD*AGGQ*DR 365
Y LPK+Y KV++ +S AIH+ +VRVR+ + RR+R PP RF R+ + Q GG
Sbjct: 61 GYVLPKLYAKVHHCVSCAIHAHIVRVRSRENRRDRRPPERFRRREDRPQGPRPGGG---A 117
Query: 366 GASGLAAVGATAAARS 413
A G AA A AR+
Sbjct: 118 PAPGGAAAPAPNVART 133
>ref|NP_181591.1| 40S ribosomal protein S26 (RPS26B) [Arabidopsis thaliana]
gi|3123279|sp|P49206|RS26_ARATH 40S ribosomal protein
S26 gi|25294903|pir||D84831 40S ribosomal protein S26
[imported] - Arabidopsis thaliana
gi|2651298|gb|AAB87578.1| 40S ribosomal protein S26
[Arabidopsis thaliana] gi|22022538|gb|AAM83227.1|
At2g40590/T2P4.6 [Arabidopsis thaliana]
gi|24111313|gb|AAN46780.1| At2g40590/T2P4.6 [Arabidopsis
thaliana]
Length = 131
Score = 134 bits (338), Expect = 9e-31
Identities = 73/135 (54%), Positives = 85/135 (62%)
Frame = +3
Query: 6 MTKKRRNRGRAKHGRGHVNRVRCESSGAMVPKDKAIKRYIVRNIVDASALRDMQEACVVD 185
MT KRRN GR KH RGHVN +RC + G PKDKAIKR+IVRNIV+ +A+RD+QEA V +
Sbjct: 1 MTFKRRNGGRNKHNRGHVNPIRCSNCGKCCPKDKAIKRFIVRNIVEQAAIRDVQEASVYE 60
Query: 186 NYALPKIYRKVYYSISAAIHSRVVRVRNAKERRNREPPRRFPNRDQQQQKKD*AGGQ*DR 365
Y LPK+Y K Y +S AIHS VVRVR+ RR R PP RF R + K G
Sbjct: 61 GYTLPKLYAKTQYCVSCAIHSHVVRVRSRTNRRVRTPPPRFTRRKEDTPKPGQPG----- 115
Query: 366 GASGLAAVGATAAAR 410
A A GA AA R
Sbjct: 116 QAPRPAGPGAAAAPR 130