Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC005144A_C01 KMC005144A_c01
(598 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_568822.1| glycosyl hydrolase family 17; protein id: At5g5... 106 3e-22
gb|AAM66024.1| beta-1,3-glucanase-like protein [Arabidopsis thal... 106 3e-22
gb|AAL77689.1| AT5g55180/MCO15_13 [Arabidopsis thaliana] 106 3e-22
dbj|BAB17320.1| elicitor inducible beta-1,3-glucanase Nt-SubE76 ... 101 6e-21
ref|NP_178637.1| glycosyl hydrolase family 17; protein id: At2g0... 92 5e-18
>ref|NP_568822.1| glycosyl hydrolase family 17; protein id: At5g55180.1, supported by
cDNA: 7119., supported by cDNA: gi_18700154 [Arabidopsis
thaliana]
Length = 460
Score = 106 bits (264), Expect = 3e-22
Identities = 46/61 (75%), Positives = 52/61 (84%)
Frame = -1
Query: 598 RPIQPGATCYDPNSLVAHASFAFNSYYQKKARAGGSCYFGGTSYVVTQEPKYGSCEFPTG 419
RPIQPGATCY+P SL AHAS+AFNSYYQK AR G+C FGG +YVV+Q PKYG CEFPTG
Sbjct: 400 RPIQPGATCYNPESLEAHASYAFNSYYQKNARGVGTCNFGGAAYVVSQPPKYGKCEFPTG 459
Query: 418 Y 416
+
Sbjct: 460 H 460
>gb|AAM66024.1| beta-1,3-glucanase-like protein [Arabidopsis thaliana]
Length = 460
Score = 106 bits (264), Expect = 3e-22
Identities = 46/61 (75%), Positives = 52/61 (84%)
Frame = -1
Query: 598 RPIQPGATCYDPNSLVAHASFAFNSYYQKKARAGGSCYFGGTSYVVTQEPKYGSCEFPTG 419
RPIQPGATCY+P SL AHAS+AFNSYYQK AR G+C FGG +YVV+Q PKYG CEFPTG
Sbjct: 400 RPIQPGATCYNPESLEAHASYAFNSYYQKNARGVGTCNFGGAAYVVSQPPKYGKCEFPTG 459
Query: 418 Y 416
+
Sbjct: 460 H 460
>gb|AAL77689.1| AT5g55180/MCO15_13 [Arabidopsis thaliana]
Length = 460
Score = 106 bits (264), Expect = 3e-22
Identities = 46/61 (75%), Positives = 52/61 (84%)
Frame = -1
Query: 598 RPIQPGATCYDPNSLVAHASFAFNSYYQKKARAGGSCYFGGTSYVVTQEPKYGSCEFPTG 419
RPIQPGATCY+P SL AHAS+AFNSYYQK AR G+C FGG +YVV+Q PKYG CEFPTG
Sbjct: 400 RPIQPGATCYNPESLEAHASYAFNSYYQKNARGVGTCNFGGAAYVVSQPPKYGKCEFPTG 459
Query: 418 Y 416
+
Sbjct: 460 H 460
>dbj|BAB17320.1| elicitor inducible beta-1,3-glucanase Nt-SubE76 [Nicotiana tabacum]
Length = 467
Score = 101 bits (252), Expect = 6e-21
Identities = 44/61 (72%), Positives = 50/61 (81%)
Frame = -1
Query: 598 RPIQPGATCYDPNSLVAHASFAFNSYYQKKARAGGSCYFGGTSYVVTQEPKYGSCEFPTG 419
RPIQ GATCYDP++L AHAS+AFNSYYQK R +C F G +YVVTQ PKYGSC+FPTG
Sbjct: 407 RPIQQGATCYDPDTLEAHASYAFNSYYQKNTRGVSTCDFSGAAYVVTQHPKYGSCKFPTG 466
Query: 418 Y 416
Y
Sbjct: 467 Y 467
>ref|NP_178637.1| glycosyl hydrolase family 17; protein id: At2g05790.1 [Arabidopsis
thaliana] gi|25316444|pir||E84471 probable
beta-1,3-glucanase [imported] - Arabidopsis thaliana
gi|4662638|gb|AAD26909.1| putative beta-1,3-glucanase
[Arabidopsis thaliana] gi|20197850|gb|AAM15281.1|
putative beta-1,3-glucanase [Arabidopsis thaliana]
Length = 473
Score = 92.0 bits (227), Expect = 5e-18
Identities = 40/50 (80%), Positives = 44/50 (88%)
Frame = -1
Query: 598 RPIQPGATCYDPNSLVAHASFAFNSYYQKKARAGGSCYFGGTSYVVTQEP 449
RPIQPGA CY P++L AHASFAFNSYYQKK RAGGSCYFGG +YVV+Q P
Sbjct: 412 RPIQPGANCYSPDTLEAHASFAFNSYYQKKGRAGGSCYFGGAAYVVSQPP 461
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 518,211,423
Number of Sequences: 1393205
Number of extensions: 11102148
Number of successful extensions: 28437
Number of sequences better than 10.0: 132
Number of HSP's better than 10.0 without gapping: 26266
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28156
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 23140425222
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
