Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC003125A_C01 KMC003125A_c01
(778 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_569038.1| dolichyl-di-phosphooligosaccharide-protein glyc... 219 3e-56
gb|AAM63023.1| dolichyl-di-phosphooligosaccharide-protein glycot... 219 3e-56
dbj|BAA97274.1| dolichyl-di-phosphooligosaccharide-protein glyco... 219 3e-56
gb|AAK59450.1| putative dolichyl-di-phosphooligosaccharide-prote... 216 2e-55
dbj|BAA23670.1| oligosaccharyltransferase [Homo sapiens] 127 2e-28
>ref|NP_569038.1| dolichyl-di-phosphooligosaccharide-protein glycotransferase
(oligosaccharyltransferase)-like; protein id:
At5g66680.1, supported by cDNA: 18419., supported by
cDNA: gi_14334505, supported by cDNA: gi_16226811
[Arabidopsis thaliana]
gi|16226812|gb|AAL16268.1|AF428338_1 AT5g66680/MSN2_7
[Arabidopsis thaliana] gi|23297258|gb|AAN12926.1|
putative dolichyl-di-phosphooligosaccharide
glycotransferase (oligosaccharyltransferase)
[Arabidopsis thaliana]
Length = 437
Score = 219 bits (558), Expect = 3e-56
Identities = 101/118 (85%), Positives = 110/118 (92%)
Frame = -3
Query: 776 NVQHHKAGEADEPSIYRINDDLEYSVEIYEWSGTTWEPYVANDVQVQFYMMSPYVLKTLS 597
N+ HH+ GE DEP+IYRI DDLE+SVEIYEWSG +WEPYVANDVQVQFYMMSPYVLKTLS
Sbjct: 296 NLVHHRVGETDEPAIYRIKDDLEFSVEIYEWSGKSWEPYVANDVQVQFYMMSPYVLKTLS 355
Query: 596 TDGKGRYFTSFKVPDVYGVFQFKVEYERLGYTSLSLSKQIPVRPFRHNEYERFIPTAY 423
TD KG + TSFKVPDVYGVFQFKVEYE+LGYT+LSLSKQIPVRP+RHNEYERFIPTAY
Sbjct: 356 TDKKGLFHTSFKVPDVYGVFQFKVEYEKLGYTTLSLSKQIPVRPYRHNEYERFIPTAY 413
>gb|AAM63023.1| dolichyl-di-phosphooligosaccharide-protein glycotransferase
(oligosaccharyltransferase)-like [Arabidopsis thaliana]
Length = 437
Score = 219 bits (558), Expect = 3e-56
Identities = 101/118 (85%), Positives = 110/118 (92%)
Frame = -3
Query: 776 NVQHHKAGEADEPSIYRINDDLEYSVEIYEWSGTTWEPYVANDVQVQFYMMSPYVLKTLS 597
N+ HH+ GE DEP+IYRI DDLE+SVEIYEWSG +WEPYVANDVQVQFYMMSPYVLKTLS
Sbjct: 296 NLVHHRVGETDEPAIYRIKDDLEFSVEIYEWSGKSWEPYVANDVQVQFYMMSPYVLKTLS 355
Query: 596 TDGKGRYFTSFKVPDVYGVFQFKVEYERLGYTSLSLSKQIPVRPFRHNEYERFIPTAY 423
TD KG + TSFKVPDVYGVFQFKVEYE+LGYT+LSLSKQIPVRP+RHNEYERFIPTAY
Sbjct: 356 TDKKGLFHTSFKVPDVYGVFQFKVEYEKLGYTTLSLSKQIPVRPYRHNEYERFIPTAY 413
>dbj|BAA97274.1| dolichyl-di-phosphooligosaccharide-protein glycotransferase
(oligosaccharyltransferase)-like [Arabidopsis thaliana]
Length = 442
Score = 219 bits (558), Expect = 3e-56
Identities = 101/118 (85%), Positives = 110/118 (92%)
Frame = -3
Query: 776 NVQHHKAGEADEPSIYRINDDLEYSVEIYEWSGTTWEPYVANDVQVQFYMMSPYVLKTLS 597
N+ HH+ GE DEP+IYRI DDLE+SVEIYEWSG +WEPYVANDVQVQFYMMSPYVLKTLS
Sbjct: 301 NLVHHRVGETDEPAIYRIKDDLEFSVEIYEWSGKSWEPYVANDVQVQFYMMSPYVLKTLS 360
Query: 596 TDGKGRYFTSFKVPDVYGVFQFKVEYERLGYTSLSLSKQIPVRPFRHNEYERFIPTAY 423
TD KG + TSFKVPDVYGVFQFKVEYE+LGYT+LSLSKQIPVRP+RHNEYERFIPTAY
Sbjct: 361 TDKKGLFHTSFKVPDVYGVFQFKVEYEKLGYTTLSLSKQIPVRPYRHNEYERFIPTAY 418
>gb|AAK59450.1| putative dolichyl-di-phosphooligosaccharide-protein
glycotransferase [Arabidopsis thaliana]
Length = 437
Score = 216 bits (551), Expect = 2e-55
Identities = 100/118 (84%), Positives = 109/118 (91%)
Frame = -3
Query: 776 NVQHHKAGEADEPSIYRINDDLEYSVEIYEWSGTTWEPYVANDVQVQFYMMSPYVLKTLS 597
N+ HH+ GE DEP+IYRI DDLE+SVEIYEWSG +WEPYVAN VQVQFYMMSPYVLKTLS
Sbjct: 296 NLVHHRVGETDEPAIYRIKDDLEFSVEIYEWSGKSWEPYVANGVQVQFYMMSPYVLKTLS 355
Query: 596 TDGKGRYFTSFKVPDVYGVFQFKVEYERLGYTSLSLSKQIPVRPFRHNEYERFIPTAY 423
TD KG + TSFKVPDVYGVFQFKVEYE+LGYT+LSLSKQIPVRP+RHNEYERFIPTAY
Sbjct: 356 TDKKGLFHTSFKVPDVYGVFQFKVEYEKLGYTTLSLSKQIPVRPYRHNEYERFIPTAY 413
>dbj|BAA23670.1| oligosaccharyltransferase [Homo sapiens]
Length = 456
Score = 127 bits (319), Expect = 2e-28
Identities = 58/117 (49%), Positives = 78/117 (66%)
Frame = -3
Query: 773 VQHHKAGEADEPSIYRINDDLEYSVEIYEWSGTTWEPYVANDVQVQFYMMSPYVLKTLST 594
V HH+ GE P+ Y + D +EYS+ I + S W P+ +D+Q++F + P+V L
Sbjct: 311 VSHHRVGETAPPNAYTVTDLVEYSIVIQQLSNAKWVPFDGDDIQLEFVRIDPFVRTFLKK 370
Query: 593 DGKGRYFTSFKVPDVYGVFQFKVEYERLGYTSLSLSKQIPVRPFRHNEYERFIPTAY 423
G G+Y FK+PDVYGVFQFKV+Y RLGYT L S Q+ VRP +H +YERFIP+AY
Sbjct: 371 KG-GKYSVQFKLPDVYGVFQFKVDYNRLGYTHLYSSTQVSVRPLQHTQYERFIPSAY 426
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 674,917,927
Number of Sequences: 1393205
Number of extensions: 14931212
Number of successful extensions: 35051
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 31893
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34111
length of database: 448,689,247
effective HSP length: 121
effective length of database: 280,111,442
effective search space used: 38375267554
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
