>KMC002625A_C02 KMC002625A_c02
CCAAACCAACCAAGGGAGGATCCTTGGCAAATGATAGAAGTGATATAAGTGTTATAATCA
TCTATCCGAATCTAAGAAATATCTTTTTAAGCGTCAGATTACAAATGACAGATGAAAGCA
AAGCAAACAAACTAGTCACAGCAAATTCCACCAACTAAAAGAGCGAAAAATATAAGATAT
TAACTTTAAAACACAACATCTAAAAGAGTTGGGAGATACGGAGAGAAATACATGCTCCCA
CTGTATAATGTCATCAGAATAACATTAGCACTGAGTGGCTGCATGCAGAGCTCGCACCCG
TCTGGCTGCAGATACTGATTCTTTTCATGAACCACAGCACGAGCGTTGGTGCAGCTCGAC
CACCACTGGCTGACGCATCTGGTTGGTTAATCTGGATAGTCTGAGGCTCAGCTCTAGAAT
CTGTGTCTGCAAGCCTCTGCTTGATGTCTCTTGCTATTGAAAAGAAAACCTCCTCCACAT
TCAAGTTTGTTTTTGCACTAGTCTCAAAGAACTTGATACCATACTCATCTGCAAGAGCTT
GGCCTTTGGAAGTAGGTACAGCCCTCTTACTTTCATCCATATCAGCCTTGTTTCCCACAA
GTATCTTGTTTACATT

BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KMC002625A_C02 KMC002625A_c02
         (616 letters)

Database: nr 
           1,393,205 sequences; 448,689,247 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

emb|CAA98172.1| RAB8A [Lotus japonicus]                               172  2e-42
pir||S57474 GTP-binding protein - garden pea gi|871514|emb|CAA90...   162  4e-39
pir||S57478 GTP-binding protein GTP13 - garden pea gi|871508|emb...   162  4e-39
pir||S57462 GTP-binding protein GTP11 - garden pea gi|871506|emb...   160  9e-39
emb|CAA98173.1| RAB8B [Lotus japonicus]                               158  6e-38

>emb|CAA98172.1| RAB8A [Lotus japonicus]
          Length = 216

 Score =  172 bits (437), Expect = 2e-42
 Identities = 88/89 (98%), Positives = 89/89 (99%)
 Frame = -1

Query: 616 NVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQ 437
           NVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQ
Sbjct: 121 NVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQ 180

Query: 436 RLADTDSRAEPQTIQINQPDASASGGRAA 350
           RLADTDSRAEPQTIQINQPDASASGG+AA
Sbjct: 181 RLADTDSRAEPQTIQINQPDASASGGQAA 209

>pir||S57474 GTP-binding protein - garden pea gi|871514|emb|CAA90079.1| small G
           protein [Pisum sativum]
          Length = 215

 Score =  162 bits (409), Expect = 4e-39
 Identities = 81/89 (91%), Positives = 87/89 (97%)
 Frame = -1

Query: 616 NVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQ 437
           NVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTN+NVEEVFFSIARDIKQ
Sbjct: 120 NVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFSIARDIKQ 179

Query: 436 RLADTDSRAEPQTIQINQPDASASGGRAA 350
           RLADTDSR+EPQTI+INQ D +A+GG+AA
Sbjct: 180 RLADTDSRSEPQTIKINQQDPAANGGQAA 208

>pir||S57478 GTP-binding protein GTP13 - garden pea gi|871508|emb|CAA90082.1|
           small GTP-binding protein [Pisum sativum]
          Length = 215

 Score =  162 bits (409), Expect = 4e-39
 Identities = 81/89 (91%), Positives = 87/89 (97%)
 Frame = -1

Query: 616 NVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQ 437
           NVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTN+NVEEVFFSIARDIKQ
Sbjct: 120 NVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFSIARDIKQ 179

Query: 436 RLADTDSRAEPQTIQINQPDASASGGRAA 350
           RLADTDSR+EPQTI+INQ D +A+GG+AA
Sbjct: 180 RLADTDSRSEPQTIKINQQDPAANGGQAA 208

>pir||S57462 GTP-binding protein GTP11 - garden pea gi|871506|emb|CAA90081.1|
           small GTP-binding protein [Pisum sativum]
          Length = 215

 Score =  160 bits (406), Expect = 9e-39
 Identities = 80/89 (89%), Positives = 87/89 (96%)
 Frame = -1

Query: 616 NVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQ 437
           NVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTN+NVEEVFFSIARDIKQ
Sbjct: 120 NVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFSIARDIKQ 179

Query: 436 RLADTDSRAEPQTIQINQPDASASGGRAA 350
           RLADTDS++EPQTI+INQ D +A+GG+AA
Sbjct: 180 RLADTDSKSEPQTIKINQQDPAANGGQAA 208

>emb|CAA98173.1| RAB8B [Lotus japonicus]
          Length = 187

 Score =  158 bits (399), Expect = 6e-38
 Identities = 78/90 (86%), Positives = 84/90 (92%)
 Frame = -1

Query: 616 NVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQ 437
           NVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNV+EVFFSIARDIKQ
Sbjct: 91  NVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVDEVFFSIARDIKQ 150

Query: 436 RLADTDSRAEPQTIQINQPDASASGGRAAP 347
           R+AD DS+AEPQT++INQPD  A   +AAP
Sbjct: 151 RVADNDSKAEPQTLKINQPDQGAGSAQAAP 180

  Database: nr
    Posted date:  Apr 1, 2003  2:05 AM
  Number of letters in database: 448,689,247
  Number of sequences in database:  1,393,205
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 510,221,610
Number of Sequences: 1393205
Number of extensions: 9957413
Number of successful extensions: 26552
Number of sequences better than 10.0: 1169
Number of HSP's better than 10.0 without gapping: 25578
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26173
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 24854530794
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

EST assemble image

clone accession position 1 MR057e07_f BP080385 1 444 2 GNf083e02 BP073490 23 404 3 GNf047c11 BP070831 23 468 4 MF040f05_f BP030400 27 568 5 MF097g02_f BP033364 27 564 6 GNf053a12 BP071286 27 552 7 MF083h05_f BP032700 27 539 8 GNf093a08 BP074213 27 537 9 MR034h11_f BP078664 27 433 10 GNf043a09 BP070506 27 410 11 MPD029h09_f AV772016 28 552 12 MFB002b12_f BP034022 28 538 13 MPD047e05_f AV773191 29 550 14 MFB071d05_f BP039162 30 566 15 MFB053d08_f BP037841 31 250 16 SPD013c12_f BP045024 32 614 17 MPD086e10_f AV775655 32 508 18 SPD069f09_f BP049540 32 643 19 MR041h08_f BP079206 33 264 20 MR062d08_f BP080749 33 445 21 MR075d07_f BP081769 33 439 22 MWM020h07_f AV764938 33 432 23 MR025e09_f BP077922 33 442 24 GNf100h02 BP074815 33 463 25 MR040b02_f BP079067 33 425 26 MFB065b12_f BP038695 33 611 27 SPD096d08_f BP051672 34 644 28 GNf043f08 BP070550 36 458 29 MPD087b05_f AV775695 36 351 30 GNf060d01 BP071822 36 508 31 SPD100b06_f BP051957 37 555 32 GNf055a05 BP071435 40 437 33 MR023h05_f BP077792 43 346 34 SPD062b05_f BP048914 47 540 35 MFB030h11_f BP036233 48 457 36 MPD093d10_f AV776103 49 524 37 MR047a01_f BP079600 49 456 38 GNf083d04 BP073483 50 413 39 GENf087f02 BP062048 52 447 40 SPDL098f05_f BP058173 52 633 41 SPD003a10_f BP044209 53 197 42 MPD034e02_f AV772332 65 567

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